Cololabis saira (Pacific saury): 133419207
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Entry
133419207 CDS
T09849
Symbol
dhx32a
Name
(RefSeq) DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32a isoform X1
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133419207 (dhx32a)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133419207 (dhx32a)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133419207 (dhx32a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
LAL_C2
Motif
Other DBs
NCBI-GeneID:
133419207
NCBI-ProteinID:
XP_061564224
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All DBs
Position
19:30019405..30160643
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AA seq
738 aa
AA seq
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MSTEHPSEEPDSFSDGEDSPGEDSVGFGDDLELNRFDGLPFSSRYYKLLKERKTLAVWKV
KCQFEDALLNNQLLIVSATATTGRSTQIPQWCAEFCLSAQYRHGMVVCTQPSRQQAVDLA
LRVADEMDVNIGHEVGYTIPLETCCSSDTVLRYLTDDMLLREMMSDPFLERYGVILVDQA
HERTVSTDVLLGLLKDILLQRPELRVVVFTVPPMTEKLVRHYGGVPLVSLESPCTAEVVH
SSTSSKDYFYSALRLVLEIHRTKESGDVVVFFASDEEVYSACNILQSESSRLGGKLDQIV
PVVLCPSQQGPVPALSEEAVPTKSRRVFLSTQQGEDAWCTVESVNFVVDTGVQKKMVYNP
RVRANSETPQPISGCQADLRKQLCAATGKCFRLYPEASLQQAETPPQMLDSNITPTVLFL
KRMEIAGLGQCHFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLDPQMAKA
LLASCEFDCVSEMLTITAMLSAPSCFLEPSAGLTHEAARCHRKFQHPEGDHFTLVNIFNA
FKQSQKEQYTTAEKWCQDYFLDHSALKTAEAIRSELINTLNRIELPISVPCFGTKTNTNN
IKRALLAGFFMQIARDVDGSGNYFILTHKHMAQVHPRSGYGAQSHKLGLPEWVVFNEYNL
SQNSLRIVSEISPQVFIQMAPLYFFYNLPSSESKDILQHMLESEGSRQSGKDPSIKHGSD
SRGNCAEVTPSYDRCIIQ
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggaacatccctcagaagagccggacagtttctctgacggcgaggacagtccg
ggagaagactcggttggctttggggatgatctggagttaaatcgcttcgacgggttgccc
ttttcctctcgttactacaaattattaaaagagaggaagactctggccgtgtggaaggtt
aagtgtcagtttgaggatgctctgctgaacaaccagctccttattgtgtctgcaaccgca
acgacggggaggagtacacagatccctcagtggtgtgcagagttctgcctgtctgctcag
taccggcatggcatggtggtgtgcactcagcccagcaggcagcaggccgtagatctggcc
ctgcgcgtggctgatgaaatggatgtgaacataggccacgaagtgggctacaccatccct
ctggagacctgctgctcctctgacacggttctgaggtacctcactgacgatatgttattg
agggagatgatgtcagaccctttcctggagcgctacggggtgattctcgtcgaccaggcc
cacgagaggacggtgagcacggacgtactcctgggtctcctcaaggacatcctgctgcag
aggcctgagctcagggtggtggtcttcacggtcccgcccatgacggagaagctcgtgaga
cactacggcggcgtcccgctcgtcagcctggagtccccctgcactgctgaggtggtgcac
agcagcaccagcagcaaagactacttctactcagccctgaggctggtgctggagatccac
cggaccaaagagagcggagacgtggtcgtgttcttcgcgtcggatgaggaggtctacagc
gcttgcaatatccttcagagtgagagctccaggttgggagggaagttggaccaaatcgtg
cccgtggtcctgtgcccgagccagcaaggaccggttcccgctctgagcgaggaggccgtc
cccaccaagtccaggagggtgttcctctctacccagcaaggagaagacgcctggtgcact
gtggagtctgtcaactttgttgttgacaccggggtccagaaaaaaatggtttacaatcca
agagtgagggccaactctgagacgcctcagcccataagtggatgccaggcagatctccgc
aagcagctgtgtgcagcaacagggaaatgtttccgcctgtatccagaggcgagcctgcaa
caggcagagacccccccacagatgttggactctaacattacaccaacagttctcttcctg
aagaggatggagatagcaggcctcggacagtgccatttcatcgacaggccagatccggag
ggcttgatgcaggcgctggaggagctggactacctcgccgcgttagatgatgatggcaac
ctgtctgaaattggcatcatcatgtctgaaatccctctggatcctcagatggccaaagct
ctgctggcatcctgcgagtttgactgtgtcagtgagatgctgacaatcacagccatgtta
tccgcaccgagctgcttcctggagccgtctgctggcttgacccacgaggcggctcggtgt
cacagaaagttccagcacccggagggcgaccacttcaccctcgtaaacatcttcaatgcc
ttcaaacaaagccagaaggaacaatatacaactgctgaaaaatggtgccaggactatttt
ctggatcattcagcccttaagacggcggaggccatcagatcagagctgattaacaccctg
aacaggattgaacttcccatttctgtaccttgctttggaaccaagacgaacaccaacaac
atcaaaagagctctgctggctggattctttatgcagattgctcgggatgtggacggctcg
ggaaattacttcattttgacacacaagcacatggctcaggtgcacccgcgctctggttac
ggagctcagtcccacaagctgggcctgccggagtgggtcgtcttcaacgagtacaacctg
tcccagaacagcctgagaatagtctcagaaatttcccctcaggtgttcattcaaatggca
ccgctgtacttcttctacaacctgccctctagtgagagcaaagacatcctgcaacacatg
ctggagtctgagggatccagacagtccggcaaggatccatctataaaacacggcagcgac
tctcgtggcaactgtgcagaagtgaccccctcttacgaccgatgcataattcagtga
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