Cololabis saira (Pacific saury): 133419343
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Entry
133419343 CDS
T09849
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133419343 (nlrc3)
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133419343 (nlrc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
Ferritin_2
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
133419343
NCBI-ProteinID:
XP_061564445
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Position
19:13104719..13121233
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AA seq
1133 aa
AA seq
DB search
MERRQHYDSILDRSKRITWQDDCYMDLQSTCSASSHAEAEDLSWLKKHQIGLQSFVTPPF
LGEMLNYLRKVDMLTSAEESSIKEAGPVQDQVNMLTSVVAGKEGQCSDALQGFVESSESP
IAQLIINHHAMVKKHKEVLLQRYEQYRDRDSVSCPKLNISSRNLLQVEGLSDLQQKEHDL
MQVGVARGGKRNHLRQLAIAKLFQPLTRVSLPPRVSLTVGVAGIGKTTWVRHFIRQWSQG
SICTDVHFVLAFTFCELNSLEKLSAERLVKLKYPHLAEPSVVLSGACRTLLILDGLDEFH
SALNFSDAAPCNDPKKEVSTADLITNIIRGNLLPDVTVWVTSRPGVASLIPGGLVDRVTE
IPGFSPADIQIFLNHHFSENDFASKIWEHLESHKILMVMCYIPCICWMTADTLLYIMQSG
TQESLPRTCTELYAHFCSMKAEVGEPRGREPIKMEQLHGSNRKLLGNIGRLAFYGLLKHK
YTFSEQDLRAYGIDLLLTQSSLGAGVLIRVESALHTTYRFAHLTLQEFLAATFYHVSSKR
AIFDLFSESSMSWPKIGFQNHFRNAFQHSQQAENGHLDVFARFLTGLLCPTAIKPLSGLL
AVGKDDGSQKAWAAGFLQGLLASGNAVVSLREVNLAYCLQELQHTELLRSVEEDLRQGSL
AGKLTRPHCIVLGFLLHVSPECSEQTNLTGCLNYTTVKSVLPQLLYCSHLRLENNKLKDD
VMELLGSLLSAKDCHIQKLSLVDNAISNKGAKALSRALLVNRTLMSLNLRNNNIGSKGAK
FLAEALKNNQALISINLQNNTIEEDGAQALAEVLQCNRKLMSLNLRKNAVKAGGAKRIAE
ALKTNQTLNKLILCSNQLGDKGTVALAEALTVNQTLLSLQLQSNSISNRGMTALTKALRV
NRGLKSLNLRENSIGVEGAKNMAQALYENNSLQDLDLTANLLHDEGVQAIAGAIKFNQGL
TSLHLQWNFIKSTATKALAHALLSNGTMKLLDLQENAIGNDGVVSLAEALKVNKSLQTLC
LQGVSAGMTGAIAMAEALMTNQTLQTLDLRGNAVGMQGAKALANALKRNRSLKSLNLQEN
SFGMDGAIFIATALKGNHELTYINLQGNGIGESGAKVISDAITASAPGCVVDI
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggagagacgacaacattacgattctatcctggaccgaagcaagcgtattacctggcag
gacgactgctacatggatctgcagtctacgtgctcagcttcatctcacgcagaagcagag
gatctgagctggctcaaaaagcaccagatcgggctgcaaagcttcgttacgcccccattc
ctgggggagatgttaaattacctgagaaaggtggatatgctgacttcagctgaagagagc
agcatcaaggaggcaggcccggtacaggaccaggtcaacatgctcaccagtgtcgtcgct
ggcaaggaaggccagtgctctgatgcccttcaggggttcgttgagagctcagagtctcca
attgctcagctcatcataaaccaccatgccatggtgaagaagcacaaagaggtgctgtta
cagcgatatgaacaatacagagacagagactcagtcagctgccccaaactgaacatctcc
tcaaggaacttactgcaggttgaaggactttctgacctgcaacaaaaagagcacgacctg
atgcaggtgggagtggctcgaggagggaaaagaaatcacctgaggcagcttgcaatagca
aaactgtttcagcctctgacccgggtcagtttgcctcccagggtctccctcacggttggg
gtggctggtattggcaagacaacatgggtacgacacttcatcagacagtggagccaaggg
tccatctgcacagatgttcactttgttttagctttcaccttttgcgagctgaactcattg
gagaagctttctgctgagaggctggtgaaactgaaatatcctcatttagcagagcccagc
gtggtcctgagtggcgcctgccggacgctgctcatactcgatggtttggatgaattccac
tctgcattaaacttctctgatgcagctccttgcaatgacccaaagaaagaagtgtccacc
gctgacttaattaccaacatcatcagagggaatttgcttcctgatgtcacagtatgggtc
acgtccaggccgggagtggcctcgctcatccctggaggacttgttgacagggtgactgaa
atccctggattcagtcctgcagacatccaaatatttctaaaccaccacttctcagagaat
gactttgccagcaaaatatgggaacacctggaatcccacaagatcttgatggtgatgtgc
tacataccatgtatttgctggatgacagccgacactttgttgtacatcatgcagagtgga
acacaggagagccttcccaggacttgcactgagttgtatgcccatttctgctccatgaag
gcagaagtaggtgaacccagagggagagagcctataaaaatggagcagctgcacgggagc
aatcgcaaactgctggggaacattggccggctagcattctacgggctcctgaaacacaag
tacaccttcagtgagcaggatctcagggcctatggcatagatctgctcttaactcaaagc
agtcttggtgccggagttcttatccgggtggagtcggccctacacacaacataccgattt
gcacatttgactttgcaggagtttcttgcagctacattctaccatgtttcatccaagcgg
gcaatctttgacctgttctcagagagcagcatgtcctggccaaagattggctttcaaaat
cacttcagaaatgcctttcagcactcgcaacaggcagaaaatggtcacttggatgtgttt
gcgcgcttcctaacaggcctgctctgcccaacagcaatcaaacctctttctgggctcctt
gcggtcgggaaagacgatggcagtcagaaggcatgggctgcagggtttttgcaaggcctc
ttggccagcggaaatgctgtggtttccttacgtgaagtcaatctggcttattgtttacag
gagttgcaacacacagaactcctgcgcagtgtagaggaggacttgcggcagggtagcctg
gctggaaagctaacacggccacattgcatagtgctgggcttcctgctgcatgtgtctcca
gagtgcagtgaacagaccaacctaacaggctgcctcaactacacaacggtgaaaagtgtg
ctcccgcagttactctactgtagccatctcaggctagagaataataaattgaaagatgat
gtcatggaactgctgggaagccttctgagtgctaaggactgccatattcagaaactaagc
ttggtggacaatgccatcagcaacaaaggtgccaaagccctgagtcgagccctcttggtg
aatcgcacgctaatgtctctcaatctccggaacaacaacattggatctaaaggtgcaaag
ttcctggcagaagctctgaaaaataaccaagccctgatttcgatcaacttacaaaacaac
accatcgaggaagatggtgctcaggcccttgcagaagtgctgcagtgcaaccgcaaactg
atgtctctgaatttacggaagaatgcagttaaagcaggtggagccaaaaggatcgcagaa
gcgctgaagacgaaccaaactcttaataagttgattctttgtagcaaccagcttggggac
aaaggaaccgtcgctctggcagaagctctgacagtcaaccaaactctgctctcactgcaa
cttcagagtaactcaatcagcaacaggggaatgacggccttgaccaaagccctaagagtg
aaccggggccttaaatccttgaacctaagagaaaactcaattggcgtggagggagcaaag
aatatggcccaagcactctacgagaacaactcgctgcaggaccttgatctcactgccaac
ctgctacatgatgaaggggttcaagcgatcgctggtgcaatcaagtttaatcaaggcctc
acctctttgcatctccaatggaacttcataaaatccacggccacgaaagctctggcccat
gccctcctctccaatggcacaatgaagctcttggatctacaggaaaatgctattgggaat
gatggtgtcgtgtcccttgctgaagctcttaaagtcaacaagtctctgcagacattatgt
ctccagggagtttcagcaggtatgaccggcgccatcgcaatggctgaagctctgatgact
aatcaaaccctgcagacgttggatctgcgtgggaatgctgtaggaatgcagggagcgaag
gctttggccaatgccttgaaacgcaacagaagcctcaagtcactgaacctgcaggagaac
tcttttggcatggatggagcaatattcattgcaacagctttaaagggaaaccacgaacta
acctacattaatttgcagggaaatggcattggagaatctggagcaaaggtcatatcagat
gcaataacagccagcgctcctggctgtgtggtggacatctaa
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