Cololabis saira (Pacific saury): 133419351
Help
Entry
133419351 CDS
T09849
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419351
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
Ferlins
133419351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
133419351
NCBI-ProteinID:
XP_061564453
LinkDB
All DBs
Position
19:27235867..27269552
Genome browser
AA seq
2103 aa
AA seq
DB search
MLRVIVESARGLPEKKFGQPDPIASVIFKEEKKKTKAIDSEVNPVWNEVLEFDLKGIPLD
SSSNLDVIVKDYETIGQNKFLGSTKISLRDLASGQARSLPSKNVPLVNENGQGTGATINL
VVAYDPPANAVPNPSDPAAGEATREAGGGGGEEDGDTVPDGGPSGSAGVTSSSGQSANLR
QKLARAQNRHRLVNKPQDFQVRVRIIQARQLPGNNIKPVVKINVCGETHRTRIKKGNNPY
FDELFFYNVHMLPSDLFEQNISFRVYDSYSLRADSLMGQFKLDVGYVYDEPAHCVMRKWL
LLNDPDDCSSGARGYLKVSLFVIGTGDEPPVEKPESSDDQDDIESNLLLPAGVTLRWATL
SLKVFRAEDIPQMDDAFVQTLKGIFGGDQNKKNLVDPFLEARFAGRKLCTQIIEKNANPV
WNQLLNLQVKFPSMCERVKLTVFDWDRMTGNDAIGTTYLNLAKIASSGGEIEEEHAGNGE
IQSYEVNSGESEVGFLPVFGPCYINLYGSPREFSGLPDPYEDLNYGKGEGVAYRGRVLVE
LSTKLEEKADKTVESIQNDDILVVQKYQRRRKYCLCAVFHCASMIQEPGEPIQFEVSIGN
YGNKLDTTCKPLASTTQYSCAVFDGNHYYYLPWADTKPVVVVTSFWEDISHRLDSVNIIL
YITHRLQSNLEAFRAAKLAKVSDNQLVEVWLKLLSQLVDDLESFPTPELEGRPNLTSLDI
QIKKLRDSALTCIKEAAKRMREEAVEISDTLSDIETWVDRLKQLAEEPQNSMPDVIIWML
RGENRVAYSRIPAHQILYSKFSEQACGQHCGKTQTIFLKYPMDKSKGLKVPVQIRVNMWL
GLSALEKKFNSYSEGTFSVFAELYENQAQVFGNWGTTGLVGRHKFSDVTGKLKLKHEYFL
PPRGWEWESDWFIDPEKALLSEADAGHTEFMDEVFQNETRFPGREWKAASEPYTDVNGEN
SRNPAEFDLPPGWEWEDDWTVDDNRAVDDLGWEYGVTIPPDDKPRSWVPAEKVYHVHRRR
RLVRPRRRGALPAGAAVERRDRGDPEGWEFSSLIGWKFHRLERSSDTFRRRRWRRKMAPE
DRLGSCAIFQLEGGLGVDTEEKEKSSKADATKLFGANTPTVSCSFDRSYMYHLRVYVYQA
RNMASMDKDSFSDPYAHVSFLHVSKTTEKLKATLNPTWDQTLIFSDVEIYGDPQNVAHCP
PDVVLEFYDADQVGKDELLGRSVLAPLVKLDPSVDQRPRLLWHPIMQRGQKAGEALVAAE
LILKLQSGESDLPLVPPKRAENLYMVPQGIRPVVQLTAVEILAWGLRNMKSYQLASVSSP
SLVVECGGQRVETAVIKNMKKSPNFPSSVLFIKVLLPKEEMYTPPIVLKVIDHRPFGRKP
VVGQCTITSLEEFRCDPNIIISDGARASKMALMMASPRKDVAITMEDTRPVLEAQFLYSM
SSAVNKMASPTSYLEKETVDWWSKFYASSGDQEKCGPYLKKGYDTLKVYDCELENVPEFN
GLTDFCNTFKLQRGKNENGDDDPSVVGEFKGAFKVYPLPDDPGVSPPMRQFRELPESGPQ
ECLVRIYVVRAVHLQPKDNNGSCDPYIKISVGRNTIEDRDNYLPNTINPVFGRMFEMTCF
LPQDKDLKIAVYDYDMLSRDEKVGETVIDLENRFLSRYNAYCGISQTFCISGINQWRDQM
KPSQILDNLARLKGLSKPRTEDNGTSLTFNGKDYTLAEFENNKEIHQHLGPARERLCLHV
LRTQGLVPEHVETRTLYSSFQPNLSQGSLQLWVDVFPKSIGLPGPPFDITPRKPKKFFLR
AIIWNTTEVTLDETSITGENMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFG
FDYLPAEQLCLVSKKEHFWSLDQTEFRIPPKLIVQIWDNDKFSLDDYLGKIMSLILKIGR
TFHIRSAFSNPDCNNSVAFPGTLELDLRKIVPPAKVPEKCSLQMVDDQEMGGTNKLENNK
SLFAQQSVRGWWPCYIEQDGKKTLGGKVEMTLEIVSEAVTDERPAGKGRDEPNMNPKLDP
PNRPDTSFFWFTNPCKSMKFIVWRRFRCLFIGIIILTIVLLFLAILLYSLPNYISMKIVK
PLK
NT seq
6312 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgagttatagtggagtcggctagggggctccctgagaagaaatttggacagccc
gatccaattgcctctgtgatttttaaagaggagaaaaagaaaaccaaagcgattgacagt
gaggtgaatcccgtgtggaatgaggtgcttgagtttgacctaaaaggtattcctctggac
tccagctcaaacctggatgtgattgtgaaagactatgagactattgggcaaaataaattt
cttgggtcaaccaaaatctctctgagagacctggcttcaggtcaggccagatctctgcca
tccaaaaatgtccccttggtcaatgagaatgggcagggtactggggcgacaatcaacctt
gtggttgcgtacgaccctccagccaatgctgtcccaaaccctagtgatcctgcagctgga
gaggccacgagggaggctggtggcggcggtggtgaggaggatggggatactgtaccagat
gggggcccaagcggctctgcgggagtcacctcatcatctggtcagtctgctaatcttcgc
cagaagctggcgagggcgcagaaccgccaccgactcgtcaataaaccccaggacttccag
gttcgtgttcgcatcatccaagctcgtcagctgcctggcaacaacatcaaaccagtggtg
aagattaacgtgtgtggagagacccacaggacgaggatcaagaagggaaataatccctat
tttgatgagcttttcttctacaatgttcacatgctgccgtctgatctgttcgaacagaac
atcagcttccgggtgtatgactcctattcgctgagagctgacagccttatgggacaattc
aagctggatgttggttacgtgtatgatgaaccagcccactgtgtgatgaggaagtggctg
ctgttgaatgaccccgatgactgcagctccggggcgagaggctacctcaaagtcagcctc
tttgttatcgggaccggtgatgagcctccggttgagaagccggagtccagcgacgaccag
gatgacatagagagtaatctgctgctgccggcaggggtgactctgcgctgggccacgctg
tcactgaaggtgttcagagctgaggacatcccccagatggatgatgcatttgtccagacg
ttaaaagggatttttggaggggatcaaaacaaaaagaacctggtggatccatttctggag
gctcgcttcgctggcagaaagttgtgcacacagatcattgagaagaatgcaaacccagtg
tggaaccaattgctgaaccttcaggtcaagttcccatccatgtgtgagcgtgtcaaacta
acagtattcgactgggatcggatgacaggaaatgatgctattggcaccacatacctgaac
ctggccaagatagcctcctctggtggagagatagaagaggaacatgcaggaaatggggaa
atacaatcatatgaagttaactcaggagagtctgaggtgggtttcttacctgtgtttggg
ccctgctacatcaatctgtacgggagccccagagaattctccggcctgccggacccctac
gaggatctcaattatggcaagggggaaggagtggcctacaggggcagggttttggtggag
ctgtccactaagctcgaggagaaggccgacaaaacagtggagagcatccaaaatgacgat
atccttgtggtacagaagtaccagaggaggaggaaatactgtctttgtgcagtcttccat
tgcgcctccatgattcaggagcctggtgaaccgatccagtttgaggtcagtattggtaac
tatggaaacaaactggacaccacctgcaaaccactggcctccactacccagtacagctgt
gctgtgttcgatgggaaccattattactacttgccctgggcggacactaaaccagtagtt
gtggttacatcgttctgggaggacatcagtcaccgtctggactctgtcaatattatcctc
tatatcactcaccgcctgcaatccaatctggaggcatttagggctgcaaagttggctaaa
gtctctgacaaccaacttgtagaggtgtggctgaagctgctgagtcagctggttgacgat
ctggaaagcttcccgacacctgagctggagggccgtcctaacttgacgtctctggacatc
cagatcaaaaagctgcgagacagtgccttaacatgtatcaaagaagcagccaaacgcatg
agagaggaggccgtcgagatctctgacactctctctgacatagaaacctgggtggacaga
ctcaaacagctggctgaggagccccagaacagcatgcctgatgtgatcatctggatgctg
cggggtgagaacagggtggcctacagtcgtatcccagctcaccaaatcctgtattcaaaa
ttcagcgagcaggcctgcggccaacactgcggcaagacccagactatctttttaaagtac
cccatggacaagagcaaaggcctaaaggtgccagtgcagatcagagtcaacatgtggctg
ggtctgtctgcacttgagaaaaagttcaactcgtactccgagggaaccttcagtgtgttt
gctgagctgtatgaaaatcaggcccaggtcttcgggaactgggggaccacaggactggtg
gggcgccataaattctcagacgtaacaggcaaactgaagctgaaacacgagtactttctt
ccccccagaggatgggagtgggagtctgactggttcattgatccagaaaaggctttgcta
tcagaggcggacgcaggccacactgaattcatggacgaggttttccagaacgagacccgg
ttccctggccgggagtggaaagctgcctcagaaccgtacacggatgtgaatggagagaat
agccgcaaccctgcagagtttgacctccctccaggatgggaatgggaggatgactggacc
gtggatgacaacagagcggtggatgacctaggctgggagtatggagtgaccattcctcca
gacgacaagcctcggtcctgggtcccagcagagaaggtgtaccacgtccaccgcaggagg
agactggtccgacctcgcaggagaggggccctccctgcaggagcagctgtggagaggagg
gatcgaggcgaccctgagggctgggaattctcctctctgattggctggaaattccacaga
ctggagcgttcatcggacacgtttcgacgaaggcgctggagacgaaagatggctccagaa
gatcgccttggatcatgtgccatctttcagctggaggggggattgggtgttgacacagag
gaaaaagagaagagctccaaggctgatgccaccaagctgtttggtgccaacacgcccact
gtgtcctgctcctttgacaggtcatatatgtaccacctccgtgtctacgtctaccaggct
agaaacatggcatctatggacaaagatagtttttctgatccatatgcacacgtgtccttc
ctgcatgtcagtaaaacaacagagaagctcaaagcaacactgaacccaacctgggaccaa
actctgattttcagtgatgtggagatttatggagacccccagaacgtggctcactgcccc
cccgatgtggtgctggagttttacgatgctgaccaagtggggaaggatgagctgctgggc
cgcagcgttttagccccactggtgaagctggatcccagcgtggatcagaggcccaggctg
ctgtggcatcccatcatgcagagggggcagaaggcgggggaggcactcgtggctgctgaa
cttattctgaaactccagtcgggcgagtcagatcttcccctggttcccccaaagagagct
gagaacctttacatggttcctcaggggatcagacctgtggttcagctcactgctgtggag
attcttgcatggggtttgaggaacatgaaatcctatcagctggcctcggtgtcctcgccc
agccttgtggtggagtgtggggggcagcgggtggagacggctgtcatcaagaacatgaaa
aagagccctaacttccccagctctgtcctcttcatcaaagtgctgcttccgaaagaagaa
atgtacacaccgcccattgtgctgaaggtgatcgaccaccgtccgtttggcaggaagccc
gtggttggtcagtgcaccatcacgtctctagaggagttcagatgtgacccaaatatcatc
atttcagatggagccagggcctcgaaaatggctctgatgatggcttcacctcgcaaagat
gtcgctatcaccatggaagacacaagaccagtgctagaagctcagttcttatacagcatg
tcatctgctgtcaacaaaatggcttccccaacttcctatttagaaaaagagacagttgat
tggtggagtaaattctatgcctcgtcaggagatcaggagaaatgtggcccttacctcaag
aaaggatacgataccctcaaagtgtacgactgtgaattggagaatgtcccagaattcaat
gggctgactgatttctgcaacaccttcaaactgcagcgaggcaaaaatgaaaatggggac
gatgacccctctgtggttggagagttcaagggtgcattcaaggtttaccccctgccggat
gacccaggtgtttcccctcctatgcgtcagttcagagagctgccagaaagcggacctcag
gagtgtctagttaggatctacgtggtccgggcagtacacctgcagcctaaagacaacaat
ggcagctgtgatccatacataaagatatcagtgggaagaaatacaattgaagaccgagac
aactacttacccaacaccataaaccctgtgtttggaaggatgtttgagatgacgtgtttc
ctacctcaagacaaagacctgaaaatcgcagtctatgactatgatatgctgagccgcgac
gagaaggttggcgagacagtgattgacctggagaaccgcttcctgtcccgatataacgca
tactgtggcatttcacagaccttctgcatttctggcatcaaccagtggagggatcagatg
aagccgtctcagatcctcgacaacctggctcgtttaaaaggcctgtccaaacccaggacg
gaggacaatggcacctcgctcactttcaatgggaaagattacacgttggctgagtttgag
aacaacaaggaaatccaccagcacttgggcccggcccgtgagcgactctgtctgcacgtg
ctcagaacacaggggcttgtcccagaacacgtggagaccaggacgctgtacagcagcttc
cagcccaatctctctcagggaagccttcagctgtgggtggatgtgtttcctaaaagcatc
ggacttcctggacctcctttcgacatcacaccacgtaagcctaagaagtttttcctacgt
gccatcatctggaacaccacagaggtgacgctggatgagaccagcattactggggaaaac
atgagcgacatatatgtcaaaggatggatgccaggcatggaggaggacaaacagaagaca
gatgtccactacaggtctctggacggagatgggaacttcaactggcggtttgtctttggg
tttgactacctgccggcagagcaactctgcctcgtatccaagaaggaacacttctggagt
cttgaccaaaccgagttcaggattccccccaagctgattgttcagatatgggataatgac
aaattctccctggatgattacctcggtaaaataatgtctttaatattaaaaataggacgt
acatttcacataagatcagcattttcaaatcctgactgtaataactctgtcgcgtttcca
ggcacactggagctggatttgcgtaaaattgtccctcctgcaaaagttccagaaaaatgc
tccctgcagatggtggacgaccaggaaatgggggggacaaacaaattggagaacaacaag
tctctgtttgcacagcagtctgtcagaggctggtggccttgctacatcgaacaggatggc
aagaaaactctgggcggcaaagtggagatgacactggagattgtaagtgaagcagtcaca
gatgagaggcctgcaggaaaaggaagggacgaacccaacatgaacccaaaactggaccct
cctaaccgtccagacacgtccttcttttggttcaccaacccgtgtaagtcgatgaagttc
attgtgtggagaaggttcaggtgcctcttcatcggaatcatcatcctcaccatcgtgctc
ctcttcctcgccatcctgttgtactctttaccgaactacatctcaatgaagattgtgaag
ccactgaagtaa
DBGET
integrated database retrieval system
