Cololabis saira (Pacific saury): 133419436
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Entry
133419436 CDS
T09849
Symbol
rangap1b
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133419436 (rangap1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133419436 (rangap1b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133419436 (rangap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DUF2457
Nop14
Ermin
CDC45
Motif
Other DBs
NCBI-GeneID:
133419436
NCBI-ProteinID:
XP_061564603
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Position
19:complement(24849648..24864153)
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AA seq
581 aa
AA seq
DB search
MASDDISQLADVLSQTHVCDGELSYKGLGLKLDNAKSVEELVREIEQYQGLRALRLEGNT
LGVEAAQAIAKALETKDLLQRCYWSDMFTGRLRSEIPTALRSLGSALMSAGARLTELDLS
DNAFGPDGVRGIEQLLKSPSCHMLRELRLNNCGMGIGGGKILAEALTECHRQSSALGAPL
RLKVFIAGRNRLENEGASSLAKAFQLIGSLEEVHMPQNGINYGGVMALASAMRQNPELRV
LNLNDNTFTKKGTLAMAQALRQLRNVQVINFGDCLVRSEGAIALAAVLREGLPILKDLNL
SFGEITEGAALVLAQALADKPYMEKVDLNGNCLGEEGCEALREVMENMEKGDMLASLSDD
EGEPDEDDDDDDDDDDDDNDDNSENDDDASDECCEENGEYSEMVKENGIASGDNPGKPES
QTDIMTFLRCPTAEKLLQLRESKTNLSHQVDASEPNQAAEVLLKIGSVYSDDPEAKMAVL
ETFDAILSKLLSGSALHSYCFLSTLLVMMGLLKGEGNTKKVSVVPGQLSCLEYAVQQEYF
PKHHASLLQLFLSRNSECLKSCGSTREKLVSALEKKCLHQH
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggatgacatttcccagctggctgatgttctgtcccagacccacgtgtgtgat
ggagagctgagctataaagggctgggcttgaagctggacaacgctaaatcagtggaggag
ctggtacgtgagattgagcagtaccagggtttacgggctttgcgcctggaaggaaacacc
ttgggggtggaagcagcccaagccattgcaaaagctctggagaccaaagacctgctgcag
agatgctattggagtgatatgttcactggaaggctgcgctctgaaatccccacagctctg
cggtccctaggcagtgcattaatgagtgctggtgccagactaaccgagctggacctgagc
gacaatgccttcgggccggacggtgtcagaggaatcgagcagctgttgaagagtccctcc
tgccacatgttgagggagttgaggctcaataattgtggtatggggattggtggaggaaag
atccttgctgaagcactgactgagtgccacagacagtcctcagctctgggagctccactt
agactgaaagtgttcattgcagggaggaaccgcctcgaaaatgaaggagccagctccctg
gccaaggcctttcagctgataggcagcctggaggaggttcacatgccccagaatggaata
aactatggaggtgtgatggcgttggcttcagccatgcgacaaaacccagagctcagagtc
ctcaacctgaatgacaacacctttaccaagaaggggacgctggctatggcacaggctctg
aggcagctcaggaatgttcaggtgatcaactttggagactgtcttgtccgatctgaggga
gccatcgccctcgctgctgtcctgagagaaggactgccgatccttaaggacctcaacctg
tcattcggtgagatcacagagggagcagcactagtgctggctcaggctctcgctgacaaa
ccttacatggagaaagtggatctgaacggcaactgtctgggtgaggagggctgtgaggct
ctgagagaggtgatggagaacatggagaagggagacatgctggcatcactcagtgacgat
gagggagagcctgatgaagacgacgatgatgatgatgatgatgacgacgacgacaatgac
gacaacagtgaaaatgatgacgatgccagtgatgaatgctgtgaagagaatggagaatac
agcgaaatggtgaaggaaaatggaatagcgagtggggacaatcctggaaagcctgagagc
caaacagacatcatgaccttcctcagatgccccacggcagaaaagcttcttcagttgcga
gagagcaagacaaacctttcacaccaggttgatgcgtctgagccgaaccaggctgcagaa
gtccttttgaagattggctccgtatacagcgatgatccagaggcaaaaatggccgttcta
gaaacttttgatgcaattttgtcaaaactactgtctggttctgcgctccactcatactgc
ttcctgtccacactgctggttatgatgggactcctcaagggagaggggaacacgaaaaaa
gtatctgtggtccctggtcaactatcatgcttggaatatgctgtccagcaggaatacttc
cccaaacatcacgcctcactgcttcaactgttcctgtccaggaacagtgaatgtcttaag
tcatgcggcagcaccagagagaagctggtctctgctctggagaagaaatgcctccaccag
cattga
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