Cololabis saira (Pacific saury): 133419619
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Entry
133419619 CDS
T09849
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C
KO
K14007
protein transport protein SEC24
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133419619 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419619 (sec24c)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133419619 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
133419619
NCBI-ProteinID:
XP_061564873
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All DBs
Position
19:complement(28652156..28677898)
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AA seq
1257 aa
AA seq
DB search
MNVNQHTPMASSYGQPQPGYGQPSYTPLDGGYPAPYTPYNGPATAYQPGAPPQGYSSFTS
FPSKAVAANPVSDLSSSLDLGLARGAPASGPPPVSAPQQYNQYSQSPGDMQNGPPQMIQA
PPRPAVSQPYNQGAMNMSGQHPSYPQHYGLPPTIQQVSNQMTGMQIASGPPTPAGPGYAP
PHSSQLPVSTAYSAAPPPSYSQAPPPVSPAPSQPPPPSGPAASQQYYGGPPPPSQQPLHS
ALPPTSQQQFTSSVQLPPSQQTIPPSSYSGPAPPPSQAPTGPGTQPQQTFLPPQPPFSSA
PLSVSQPTFGTGPPPPAQGSFPPQAPPPSQPGGFPPAGPPTSAAAGQYPGPMPPQQQPPP
TQPSPYHSGPPPPRVQMPPTSMAQSNHLPPGPQGPPGPPGPPGPPGALQQPPPQPGMQTG
YPSQQNGAFGQVRSPQHGYAGPYPQQPNYGAPAPAPAPPAQKRLDPDAIPSPQAPDMPAV
QKSRHRIDPDAIPSPIQVIEDDKAKSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFVR
CTAYNMPCTSDMAKQSQVPLAAVIKPLATLPPDETPPYMVDHGESGPIRCNRCKAYMCPY
MQFIEGGRRFQCGFCSCVTEVPQHYFQHLDHTGKRRDCYDRPELSLGSYEFLATVDYCKN
NKLPQPPAFIFLIDVSYNAVKSGMVSIVCQELKSLLDHLPRENPEMASVVRVGFVTYNKV
LHFYNVKSSLAQPQMLVVSDVSDMFVPLLDGFLVNVNESRQVIESLLDQIPEMFADTRET
ETVFGPVIQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLIATDKEKSLFQT
QAGFYNNLAKDCVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAQSDQERF
LNDLRRDVQKPVGFDAVMRVRTSTGIRATDFYGSFYMSNTTDVELAGLDCDKAITVEFKH
DDKLSEETGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDTIINYFAKYA
FRGILNNPTKAVRDTLVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSD
VLLPGADVSLDDRAYLRQLISGMDVSDSHVFFYPRLLPLMKLESGSLPVAVRDSEERLSK
GGVYLMETGLHLFLWVGASVQQELLINIFGTSSFNQVESSMTSLPVLDNPYSQRLREMVD
SFRAQRSRYMKLMVVKQEDRTELIFKHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctcttcatatggccagccccagcctggctat
ggtcagcccagctacactcccctggacggagggtaccctgccccatacacaccctacaac
ggccctgctacggcctaccagcctggggctcccccacaaggttattcttctttcacaagc
tttccctctaaggctgtggcagccaacccagtctctgacctctcctcttctcttgactta
ggtcttgccaggggtgctcccgcctctggaccccctcccgtctcagcacctcagcagtat
aatcagtacagtcaaagtccaggagacatgcagaatggacccccacagatgatacaggca
ccacccaggcctgctgtgtcccaaccatataaccagggagccatgaacatgtcagggcag
cacccctcctatccacaacactacgggcttccacccacaatccaacaggtcagcaaccag
atgacagggatgcaaattgcatctggaccaccaacccctgcaggacctggatatgctcca
cctcacagctcacagcttcccgtcagcactgcttactcagccgcacctccgccctcctat
agtcaagcccctccccccgtgtcccctgctccctcccagccaccacctcccagtggtccg
gcagcttctcagcaatactatggaggcccaccacctccttctcaacagccattacactct
gctctcccccctacctctcaacagcaattcacctcttctgttcaacttcctccttctcag
caaactatccccccttcctcctactcaggtcctgcacctccacctagtcaagctcccact
ggcccggggacccagccacagcagacgttccttccacctcagccccctttctcctcagcc
cccctgtctgttagccagcccacctttggcactggcccgcctccacctgctcaagggtcc
ttcccgcctcaagcaccccctccctctcaacctgggggtttccctcccgctggtcctccc
acctcagccgccgctggccagtaccccggccccatgcccccccagcagcagcctcctcca
acccagccatccccttaccactcagggccccctccccccagagttcagatgcctcccact
tcaatggctcaaagcaaccatctgcctccaggaccacagggtccaccaggtcctcccggg
cctcctgggcctcccggggccctgcagcagccgcctcctcagccgggcatgcagacaggt
tatccttctcaacagaatggtgcatttgggcaggtgagaagccctcagcatggttacgcc
ggtccttatccccaacaaccaaactatggagcccctgcgccagcaccagctccacctgca
cagaaaagacttgacccagatgccattcctagcccgcaagcgcctgacatgccggctgtg
cagaaatcaagacatagaatagacccagacgctatccccagcccaatccaggtaatagag
gatgacaaggctaagagcaccgagcctttcaccacaggggtcagaggtcaggcgcctccg
ttggtcaccaccaacttccaggtcaaagatcaagggaatgccagccccaggtttgttcgc
tgtacggcctacaatatgccttgtacgtccgatatggccaagcagtctcaggtgccactg
gctgctgtcatcaagcccctcgccaccctgccgcctgatgagacccctccatacatggtg
gaccatggggagagcggtccaatccgctgcaaccgatgcaaagcctacatgtgtccatac
atgcagttcatagagggaggtcgccgcttccagtgtgggttctgcagctgcgtcacagag
gtgcctcaacattacttccagcatctggaccacaccggtaagaggagggactgctacgac
aggccggagctgtcactgggaagttacgagtttctggccactgtcgactattgtaagaac
aacaagcttcctcagccgccagccttcatcttcctcatcgacgtgtcctacaacgctgtg
aagagcggcatggtcagcatcgtctgccaggaactcaagagtctcctggaccacctgccc
agggaaaacccagaaatggcgtctgtggtgcgggtgggtttcgtcacctacaacaaggtt
ctgcacttctacaatgtgaagtcgagtctggcccagccccagatgctggtggtgtcagac
gtctcggacatgttcgtgcccctgctcgacgggttcctggtcaatgtgaacgaaagccgg
caagttattgagagtttgttggaccagatcccagagatgtttgctgacaccagggaaact
gaaacagtctttggacccgtcatccaggcaggactggaggcactcaaggctgctgactgt
gcagggaagctgttcgtgtttcacacgtctctgccaatcgctgaggctcctgggaaacta
aagaacagagaagacaagaagttgattgcgacagacaaggagaagtctctgtttcagacg
caggctggcttctacaacaatctggccaaggactgcgtggcccagggttgctgcgtggac
cttttcctcttccccaatcagtatgtggacgttgccacattaggggtggttcctgtctcc
accggaggttcagtctacaagtacacatacttccaggctcagtcagatcaggagcgattc
ctgaacgacctccgacgagacgttcagaaaccagttgggtttgatgccgtcatgagggtc
cgaacaagtacaggtatccgagcaacagacttctacggctcattttacatgagtaacacc
acagacgtggagctggcaggcctggattgtgacaaagccatcaccgttgagtttaagcac
gacgacaagctgagcgaggagacgggggcactcatgcagtgcgctgtgttgtacacgagc
tgcagcggccagaggcgtctccgtgtgcataacatggctgtcaactgctgctcacagctg
gctgacctttaccgaaactgtgagactgacacaatcatcaactacttcgccaaatacgct
ttccgcggcatcctgaacaaccccaccaaggcagtgagagacaccctggtgaaccagtgt
gcccagattctggcctgctatagaaagaactgtgccagtccctcgtctgctggtcagctg
attcttccagagtgcatgaagctgctccccgtttatctcaactgtgtgctgaagagcgac
gtgctgctgccgggagccgacgtgtcgttggacgacagggcgtacctcaggcagctgatc
agcggcatggacgtgtccgactcccacgtcttcttctacccccgtctgcttccactgatg
aagcttgaaagcggatcgttgccggtggcagtgagggactcggaggagaggttgtctaaa
ggcggagtttatctcatggagacggggctgcacctcttcctgtgggtgggggccagcgtt
cagcaggagctgctcatcaacatctttggcacgtcgagcttcaaccaggttgagtccagc
atgacaagtctaccggttctggacaacccctactctcagagactccgagagatggtcgac
tccttcagagcgcagcgctctcgatacatgaagctgatggtggtgaaacaggaagaccgg
accgagctgatattcaagcacttcttggtggaggacaagagtgccagcgggggagcttca
tacgtggacttcctgtgtcacatgcacaaggagatccgccagcttctcagctag
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