Cololabis saira (Pacific saury): 133419632
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Entry
133419632 CDS
T09849
Symbol
epas1a
Name
(RefSeq) endothelial PAS domain-containing protein 1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04137
Mitophagy - animal
csai04140
Autophagy - animal
csai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133419632 (epas1a)
04137 Mitophagy - animal
133419632 (epas1a)
04148 Efferocytosis
133419632 (epas1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133419632 (epas1a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133419632 (epas1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
bHLH_HIF1A
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
133419632
NCBI-ProteinID:
XP_061564925
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All DBs
Position
19:complement(29090079..29095918)
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AA seq
374 aa
AA seq
DB search
MMTADKEKKRAISREAARKRRRVESDVFGDLCRLLPLQPSVRAHLDKPSIIRLTLSYIRM
RTLLKVSDSVETNAEAGHAVKGQPGPGGGGEMNWDKEEKQGEDLVPSEETSMYLRVLEGF
LVVLSAEGDMMFLSDNVSKYMGLTQTELMGHNIFEYTHPCDHEEIRHNLRLTAGEAWCTQ
KRDFVMRIKSALTHRGRSANLKSATWKVLHCQGQSKVCAASSSVSCLLLTCRPLPLSHTL
LSTHTFTSQHSMDMRFTYCDQRVTSLLGYRPDELIGRSLYELCHAHDTSCLNKNHMNLCL
KNQSVSGQYRLLVRTGGYVWVESHSAVIPSVRASRSRPAAHQPLCILCVTYVLSGVEEPT
LHLSLDQIWTRYPS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggctgacaaggagaagaaaagggcaatcagccgcgaggcggccagaaagagg
cggcgagtggagtctgacgtgttcggggatttatgccgcctcttgccgctgcagccctcc
gtccgagcccacctggacaagccctccatcatccgcctcaccctcagctacatccgcatg
cgcacgctgctcaaagtttcagactctgttgagacgaacgcggaggccggacacgcagtt
aagggccagcctggaccgggaggggggggagagatgaactgggacaaggaggagaagcaa
ggggaagatctggtcccgtcggaagagaccagtatgtacctgagagtgctggaggggttt
ctcgtggtcttgtccgctgagggagacatgatgtttctgtccgacaacgtcagcaagtac
atgggcctgacgcagacagagttgatgggacacaatatttttgagtacactcacccctgc
gaccacgaggagatcagacacaacctacgtctgacggcaggggaagcttggtgcactcag
aagagggattttgtcatgaggattaaaagtgctctgacacacagaggaagaagcgcaaac
ctcaagtcagccacgtggaaggtgctgcactgtcagggccagtcaaaggtgtgcgcggca
tcttcttctgtgtcctgcctgctcctgacctgccggcccctgccgctctcacacacactc
ctcagcacacacaccttcaccagccagcacagcatggacatgaggttcacgtactgcgac
cagagagtgacttctcttctaggttacaggcctgacgagcttatcggccgttccctctac
gaactctgccacgcacacgacaccagctgtctgaacaagaaccacatgaacttgtgtctg
aagaaccagtcggtcagcggccagtaccggctgctggtcagaaccggaggttacgtctgg
gttgagagtcacagcgccgtcatccccagcgtccgagcctcccggtccagacccgccgcc
caccagccgctctgcatcctctgcgttacctacgttctcagtggagtggaggagcccact
ctgcacctctctttggaccagatttggaccagatatccgagctga
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