Cololabis saira (Pacific saury): 133419709
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Entry
133419709 CDS
T09849
Name
(RefSeq) liprin-alpha-3-like isoform X1
KO
K26226
liprin-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133419709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419709
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133419709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
DUF745
Motif
Other DBs
NCBI-GeneID:
133419709
NCBI-ProteinID:
XP_061565074
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Position
19:complement(11876377..11916320)
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AA seq
1236 aa
AA seq
DB search
MMMCEVMPTISEDGRSGTGGGSSSPAGAGIGGSGGTMGGGGFSGREPRGGGDEGGSTGNL
ESLMVNMLTERERLLENLRETQDSLGTAQLRLRELGHEKESLQRQLSIALPQEFAVLTKE
LNVCREHLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSS
EVEVLKALKSLFEHHKALDEKVRERLRVALERVSMLEDQLATSSQEVISLKDQIKRRQQG
VDGGKDRLPNGPSSGVEDGELDRQREGEIERQRAELSQLRERLALMCRQVGEIEEQLAAA
RREVTKSEEANQKLQREVKEALCQREDMEERITTLERRYLSAQREATSLHDIKDKLENEL
ASKESLYRQSEEKNRQLQERLDEAKQKLQQTLQRAETLPEIEAQLAQRVAALNKAEERHG
NFEERLRQMEAQLEEKNQELQRARQREKMNDEHNKRLSDTVDKLLSESNERLQLHLKERM
AALEEKNALSEELSNMKKIQDDLLANKEQLLAELERVQLELDQLRGRPGSSYSRAGSVSS
LPSTLFRRSLPGSASELRYPQGSGSLPSGYGSSSGGVVVRRAHRGRWGPRDDGNKYGDWD
SGSMLGPGYDGGVEGGCSDDEDDRETLFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIK
LIQEEKESTELRAEEIESRVSSVALDTSPLPPSSLGGRDCVGRGYMTPSITSSTLASPSP
PSSGHSTPRLPHSPARDSDRQNMKEGEECRALALIDSTPTVPRALRLDRMTHTHPGAGLD
DHREFRSLSTDGSTTASQDSLHKASKKKSIKSSIGRLFGKKEKGRIGAPGRESASLASTP
SDDLGSADPLGLAKLGTGTVEKRSSKKKHDLLEEACRQGLPFASWDGPTVVTWLELWVGM
PAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPAST
RSSTSNIWMTHAEMESLTAATKPEQKEFSWDQILAYGDMNHEWVGNEWLPSLGLPQYRSY
FMESLVDARMLDHLTKKELRGQLKMVDSFHRVSLHYGIMCLKRLNYDRKELERKRDDSQH
ENQDVMVWSNERVMCWVQSIGLKEFADNLLESGVHGSLLALDDTFDYTDLALLLQIPNQN
TQARQVLEKEYNTLISMGTERRPDEDGTKTFTRSPSWRKMFREKDLRGVTSDSSETLPAN
FRASAISTPSVTLRKVQSEVNSGPRGESASVRTYSC
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtgcgaggtgatgcccaccatatctgaggatgggcgaagcggaactggcgga
ggatcctcctcacctgcaggagcaggaattggcggctctggcgggacaatgggcggagga
ggattcagtggcagggagcccagaggtggaggagacgaagggggcagcacggggaacctg
gagtctctcatggtcaacatgctaacagagagggagaggctgctggagaacctgagggag
acgcaggacagcctgggcacagctcagctccgcctccgcgagctcggccacgagaaggag
tcacttcaaaggcagctatccattgctttgccacaggagtttgctgtgttgactaaagag
ctcaacgtttgccgggagcaccttctggaaagggaggaagaaattgctgagctcaaggca
gagagaaacaacacacgcttactgctcgaacacctagagtgtctagtgtctcggcacgag
cgcagtttgaggatgactgtggtgaagaggcaagcccagtcccctgcaggggtctccagc
gaggtggaggtcctcaaggccctcaagtcactgtttgagcaccacaaggccctggatgag
aaggttcgggagaggctccgtgtggccctcgagagggtgtccatgttagaggaccaactt
gcaacatcttctcaagaggtaatctcattaaaagaccaaattaaaagacgtcaacaaggg
gtggacggcgggaaagatcggctacccaatggcccctcatctggcgtggaggacggggag
cttgacagacagagggagggagaaatagagcgacagagagccgaactgtcccagctgagg
gagaggctggcgctcatgtgccgacaggtcggggaaatagaggaacagcttgcggccgcc
aggagggaggtgacgaagtcagaggaggccaatcagaagctccagagggaagtgaaagag
gctctttgccaaagagaagacatggaggaaagaattacaacactagagcggaggtatctc
agtgcccagagggaggcaacttccctccatgatatcaaagacaagctggaaaacgagctg
gccagcaaggagtccctgtacagacaaagtgaagaaaagaacagacagctgcaggagcgc
ctggacgaggccaagcagaaactccagcagaccctgcagagagcagagacgttgccggaa
atcgaggcccagcttgcacaaagagtagctgctctcaataaggcagaggagcgtcacgga
aactttgaagagcgtttacggcaaatggaagcccagcttgaggagaaaaaccaggagctc
caaagggcgcgacagagagaaaagatgaacgacgaacacaacaaacgcctgtcagatacg
gtagacaagctcctgtctgagtcaaatgagagacttcagcttcacctcaaagagcggatg
gcagcgctagaagagaagaatgctctttctgaggagctgtccaacatgaagaaaatccag
gacgatcttctcgctaataaggagcagcttcttgctgagcttgaacgagtccagctggag
ctggatcagctaagaggcaggcctggctcttcatactccagggcgggcagcgtgagctca
ctcccctccacccttttccggagatctctccccgggagtgcctccgagctgcggtaccct
cagggtagcggctcactcccctccggctacggcagctcctccggcggggtggtggtcagg
cgggcgcaccgcggccgctgggggcccagagacgacggcaacaagtatggggactgggac
agcggcagcatgttgggtccaggatatgatggtggggtggaaggaggctgctctgacgac
gaggacgacagggagactctgtttggatccgagctgctctctcccagcggacagacggac
gtacagactttggccatcatgttacaggaacaattggaggccattaacaaggagatcaag
ctgattcaggaggagaaggagagcacagagctgagagcagaagagatcgagagtcgggtc
agcagcgtggccctggatacctcacctcttcccccctcctctttgggaggacgggactgt
gttggccggggctacatgactccctccatcacctcctcaacgctggcgtctccatcgccg
cccagctctggacattccaccccccgcctgccgcattcacctgctagggacagcgacaga
cagaatatgaaagaaggggaagaatgcagagcacttgccctgattgattccactcccact
gttcctcgggcgctacgattggaccgcatgacgcacactcatcccggggcaggccttgat
gaccaccgtgaatttcgcagtctttctaccgacggatccaccactgctagtcaggattcc
ctccacaaagccagtaaaaagaagagcatcaagtcatctatcggacgtctctttggtaaa
aaggaaaagggaagaatcggtgcacctggacgggaatctgcctcactggcttccactccg
tctgatgaccttggttcagcggacccgttaggtttggccaaacttggcactggaacagtg
gaaaaaagaagcagcaaaaagaagcacgacttgttggaggaagcctgtcgtcagggtctg
cctttcgcctcttgggacggccccactgttgtcacgtggctggagctgtgggtggggatg
cctgcgtggtatgtggcagcctgccgtgccaacgtgaagagcggtgccatcatggccaac
ctgtcagacacggagattcagagggaaatcgggatcagcaatcctttgcacaggctcaaa
cttcgcctggccatccaggaaatggtctccctcacgagtccgtctgcacctgcaagcact
cgctcctcaaccagtaatatttggatgacacatgctgagatggagtctctcactgctgcc
accaaaccagagcagaaggagttcagctgggatcagatcctagcgtacggagacatgaac
cacgaatgggtgggaaacgagtggctgcccagtctgggtctgccccagtatcgctcttac
ttcatggagtcactggtggatgctcgcatgcttgatcacctcaccaagaaagagctgagg
ggccaattgaagatggtggacagtttccacagggtgagtctccattacggtatcatgtgc
ttgaagcgcttgaactacgacagaaaagagttggagaggaagagggatgacagtcagcat
gaaaaccaagatgtgatggtgtggtccaatgagcgagtgatgtgttgggtccagtccatc
ggcttgaaagagtttgcagacaacctattagaaagtggggttcatgggtctctcttggct
ctagatgacacttttgactacactgacttggccctcctccttcagataccaaaccagaac
acacaggcgcggcaggtcctcgagaaggagtacaatactctcatctccatgggaacagag
aggaggcccgatgaggatggcacaaaaacattcacacggtcgccgtcatggcggaaaatg
ttccgagagaaggacctccgtggtgtgacgtccgactcctcagagacgttacctgccaac
ttccgtgcctcggccatctcgaccccctccgtcaccttaagaaaagtccagagtgaagta
aactctggtccaagaggagagtcggcgtccgtgagaacatactcctgctga
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integrated database retrieval system
