Cololabis saira (Pacific saury): 133419713
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Entry
133419713 CDS
T09849
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133419713 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419713 (rab11fip3)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133419713 (rab11fip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
ZapB
WD40_alt
2-thiour_desulf
Motif
Other DBs
NCBI-GeneID:
133419713
NCBI-ProteinID:
XP_061565094
LinkDB
All DBs
Position
19:complement(12948980..12978948)
Genome browser
AA seq
1099 aa
AA seq
DB search
METTVLSSPLGLTQWEADQTFPLGFQLLDSDNEAVLCQSGQTGLGFRKGDQGETLKQSEE
EKVFVDKPDELENFINASTFSCGDLQFFGGHAAISQTSLKQELSCTEKTEGLDEISDCTL
SWLFSPDLADVIGKTSARKELTLTQDSPLEGSDVLINQAEQMSLSMPSSHTISEDNSDFN
TSDPFLLVDLSNENSCLTPTSSGELNAQGVTEELEYLPQEEQTGLPPLPSSETLSPETGH
KSLFPDQVTDLPVTSHSTPLGLSETCLQPNHIKKLQECFEGSVPLLDLEVPDFDNGVSLC
PVGFESVCTGNSLDLSTEELGLAQATVIGDLPSEQQSENESLALGLSDEPSFLTLPLTED
ASIQGDLTTENNSVENVSQDLMEDDVCFGAKNHGHETMALDLNLTVEEAHNDESWDLKPQ
EGVQNGSAISPTAEQTEEKLTHTNQLEESDCHEVTSLDFSVQDVNTSPETGWTSEQDVVA
ISLSKMVVDDSLPMVSAENTREEDVSPLKAVFDALDQDGDGFVRIEEFMEFAAAYGADQV
KNLTKFLDPSGLGVISFEDFHRGISAISNGGPEPQIYNVSYSPGDGAVSCPEEYDEQNEV
TDSAYLGSESTYSECETFTDEDTGALVPPEMHEDVETDSGIEATLHDPEDAGNRFSLNSE
HHNHSLVTVIGGEEEHFEDFGESNTSELSLETSVEGSVGQSDSPPPPDQVNGSSVLSPSA
TASLPDCFQSFLREEALDFFCSQCHKQISRLEDLSTRLNFLEMTSAGKRLSSKKVARHLL
QNSSMTLDTMSDLTRDILELADNDITDKMLLLERRVAELEKESEASGEQHARLRQENLQL
VHRANALEEQLKEQELYADEQLQIEIRRQKEAVSKLEREKGLELENLQARVQQLDEENSE
LRSCVPCLRANIERLEEDKRKLEDEGETVSDRLKEETESRRKMADKLSHERHQNQKEKES
TQELIEDLRKQLEHLQLYKLEAEAKRGRSPSAGLQEYQTRTREAELEQEIKRLKQDNRTL
KEQNDELNGQIINLSIQGAKNLMSSSFSDSLAAEINSVSRVELMEAVHKQEEINYRLQDY
IDKIIVAIMECNPAILEVK
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggagacgacagtcctgtctagccctctggggctcacgcagtgggaggccgaccagaca
tttcctctgggatttcaacttctggattcagacaatgaagctgtgctctgtcaaagtggc
cagacaggtttgggtttcaggaaaggcgatcagggtgaaactctcaaacaaagtgaggaa
gaaaaggtttttgtggataagccggacgagttggaaaacttcataaatgcctcaactttt
tcctgtggagatttgcagtttttcggaggacacgctgcaatttcccaaacttctctcaag
caagaattgtcttgcacagaaaaaactgaaggacttgatgaaatcagtgactgcactttg
tcgtggctcttttctccagacttggctgatgtgattgggaaaacctctgcccgcaaggag
ctgactctgacacaggattcccctcttgaggggtcggatgtcctcattaaccaggctgag
caaatgagcctcagtatgccatcttcacatacaatatcagaggacaattctgattttaac
acaagtgatccatttttgttagtagatctttcgaatgaaaactcttgtctcacgccgacg
tcttcaggggagttgaatgcacagggtgtcactgaggagctggaatacctgccacaggag
gagcagacaggtctccctcccctaccgagcagtgagactttgtcacctgaaaccggtcac
aaaagtttattccctgatcaagtgactgatctgcctgtaaccagtcactctacccctcta
ggtttatctgagacctgcctgcagcctaaccatatcaagaaactccaggagtgttttgaa
ggatctgtgcctttgttggatttagaggttccagattttgacaacggtgtcagcctatgc
cccgtcggttttgaatccgtctgcacaggtaattctttagatttatcaacagaagagttg
gggctggcacaagctactgtaattggagatcttccttcagagcaacaaagtgagaatgaa
tcacttgctctgggtttgtcggatgagccttctttcctgacactgcctctgactgaagat
gcttccattcagggtgatctcaccactgagaataactctgtggagaatgtttcccaggat
ttgatggaagacgacgtttgttttggagcaaaaaatcacgggcatgaaacaatggctttg
gatctaaacttgactgttgaagaggcccataatgacgaatcgtgggacttgaaaccacag
gagggtgtgcagaatggaagtgctatcagtccaacagctgagcagacggaggagaagctg
acgcacaccaaccagcttgaggaatcagattgtcatgaagtgacttccttggatttttcg
gttcaggacgtgaacacgtctcctgaaactgggtggactagtgagcaggatgtggtggcc
atttctctctctaagatggtggtagatgactcactgccaatggtctcagctgagaatacg
agggaggaagatgtctctccgctaaaagctgtattcgatgctttagaccaagatggagat
ggcttcgttcgtattgaagagtttatggagtttgcggctgcctatggggccgatcaggta
aagaatctgaccaagtttttggatcccagtggccttggagtcatcagttttgaagacttt
caccgtggaatatctgcaattagcaatggtggcccagaaccacagatctacaatgtaagc
tacagtccaggggatggagctgtgagctgtccagaggagtatgatgagcaaaatgaggtg
acagacagtgcatacctgggctctgagagcacatacagtgagtgtgaaaccttcactgat
gaggacacgggagccctcgtacctcctgagatgcatgaagatgtggagacagacagcggc
attgaggccacgctgcacgatcctgaagatgctggaaacaggttttccctgaactctgag
caccacaaccactccttggtgacagtcattggcggagaagaggaacactttgaggacttt
ggggaaagtaacacctctgagctgtcgttagaaaccagtgtggaaggatctgtaggacaa
agtgactcccctccgccccctgaccaggtcaatggctcatcagttctctctcccagtgca
accgcttctctccctgactgctttcagagcttcctcagggaggaggcgctggactttttc
tgtagccaatgtcacaaacaaataagtcgtctcgaagacctctccactcgcctcaatttc
ctagagatgactagtgctgggaagaggctgtccagcaagaaagtggcaagacacctcctt
cagaatagttcaatgacactggacaccatgagtgacttaacgcgggacatcctggaactt
gctgacaacgacatcacagacaagatgttgcttcttgagcgtcgagtggcagagctggag
aaggagtccgaggcatcgggagagcagcatgcgcggctgcgtcaggagaaccttcagctg
gtgcatcgggccaatgcactggaggagcagttgaaggagcaagagctctatgctgatgag
cagctacagatagagattcgacgccaaaaggaggccgtgagcaagctggaaagagagaag
gggctggagctggaaaacttacaggctagggtgcagcagcttgatgaggagaacagtgag
cttagatcctgtgttccatgtcttcgagcaaacatcgagagactagaggaggacaagagg
aagctggaggatgaaggagagactgtgtctgacaggctgaaggaggagacagaatcacgc
agaaagatggcagacaaattaagtcacgagcgtcaccaaaaccaaaaggagaaggaatcc
actcaagaacttattgaagaccttcgtaaacaacttgagcatctgcagctttacaagctg
gaggctgaagcaaagagaggtcgctctcccagtgcaggcctgcaagagtatcagacacgc
acccgtgaagcggagttggaacaggagatcaaacgactgaaacaggacaaccgtactctg
aaggagcagaatgatgaattaaatggccagattatcaacttgagcatccagggggccaag
aacttgatgtcttcctccttctcagactctctggcagctgaaatcaactctgtgtctcgt
gtagaattgatggaggctgttcacaaacaagaggagatcaactacagactccaggactac
attgacaaaatcattgtggctattatggagtgcaaccctgccatcctggaggtcaaataa
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integrated database retrieval system
