Cololabis saira (Pacific saury): 133419761
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Entry
133419761 CDS
T09849
Symbol
heatr1
Name
(RefSeq) LOW QUALITY PROTEIN: HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133419761 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133419761 (heatr1)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133419761 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
Arm
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
LIP1
Vac14_Fab1_bd
MMS19_C
Motif
Other DBs
NCBI-GeneID:
133419761
NCBI-ProteinID:
XP_061565159
LinkDB
All DBs
Position
19:complement(5858780..5925443)
Genome browser
AA seq
2151 aa
AA seq
DB search
MTSLAHQLKRLALPQSDGDLLTRRDVASVLFDPKDAAAMDRSTFYALGCTGLEELLGIEP
AFLEFQDTLFSPASVTLERSVQSREVNDKLDAGISLFLTRLCPYFLLKPALKCLEWLVHR
FHVHLYNVDSLLACSLPYHDTNVFVRVLQLLKIRDGTNRWNWLHSLQKPGVPLSRAVLVV
HCYSDLSFMDFICSMVTRSIQAFSGHSTSFSQLRIIFSFFASTIVAALDSAENVSDAVIA
KLLPYVQKGLRSPLPDYRAAGYMLVCQLAVKVVLEPELVERLALQLSKSLVRDPVLAQEG
LGCLTVLLQNQRDGAAGPRAAAQLSSVPVLSSTLRVMAVTHDVGPLLRYLLPHLVRAGFS
SGRXEQENWAVLENILSSVPLPKDLDRTLARLILVGYLGLTDRSPQDLEALDPLLLPLVR
LLESRYPGSLDDVLAGHVTDLSDPQQKRLFHHFLSLSTGGGKHQILEDLDTSLLLSLKHP
RASIRRAALDRLVEAAPSGQQLGLDRDFLKEAVAERLQDDVPEVVLAALRVLQVLLDGED
GVDGEDSVSWLLSLLLRADASEPQRWRPVLEETVRSLSHPRLGKADGELLQKTGWRLLPF
LVVTSTQTQLARDLAHSPLLTRHPLTQNWAQELDKVMKRSSEPDFVGSANQRLVSTLAGN
LAHMEHFAKREALEQLAGLVQQRGSGLRDRASFLVLVQTLLQSLTQLSETEHLLTAQRVY
AALEPPLLEAAGTPRTQEAEPAVSVPPSFSEAVTLYLRRCESQTGPVDPGDPDYTRVLMA
LLQDFISSLRCPSTAFRGEAWWNPEKLDSNTCCYLGLLGRVFGLVLEGSAEGPASRGFRD
LMKLLVQVHLPEPASVFSFLSLLWGYGGNHGDQLDLKVGVVLQTRALYMGGALLSSQTPA
ALEKLTAAESPVVPSLLCCLSSTVREVRRAALAALGSLSGASGSPFQPITERLLQTGEEI
STDPAYLSTALGVLHDESSCSKPSAAQRKLQAALQQLLRCVQSRSCPSYSSAALLDALGL
VSGTSVLALLLPVLERLLEQTGPDTPPLLRAETRLLRLVLRKYEEASAPLLAQDRTCLDL
LVRALRLPGLQLLALEQITKPFFSAIGDDGVQQKLLSVMFDLLDGAGPAAANAVGGVFKA
IAVDAQLVANELAPPQKPSVSVTVQQTRRSRMSRRRPQEDSGTGPEGGTGPEGGTGPDAG
TGPDGDGGTVPWQRVTLVLELLQHKKKLKRAQTLVPVLFSLLARSLEPRAARHHNMEYTK
QLLLSCLLNICTRLEGEAGVLDEERFSVELVVQCIRGSEVPQTHHQALLLLGAAASIFPE
KVLHSIMPIFTFMGANILRLDDSYSFRVIDRTVQTVIPALIKAQPSPSSSQVVAVATRIM
QVFVDALPHVPDHRRLALLTRLVSTLGPAHFLWVMQLLLLRLHATQSSTPTSDRDEAQER
NAEFWVTLSCQFGVGEQLGSLVDVLKFLQQLPDDKDDAKRPAGRPAARKKPGDVEKLDEL
IFSVEAHSSKELRHFKFLCVSFMSQLLKSSSFVQKVADGGEDVEASLQPLQQRLLEEVLR
YIHSVARCVEKNADQPTAKFWRALLKQSYDVLDKVNALLPADSFITVIRGLMGNQLPSVR
RKAMELLNNKLHHRTQWDEQQVTALLQLTGDLLAVVGKSPANVGAAEEAEQAVNRQTALY
SLKLLCRSFGAGHQEAFRPVLLRAVEVVVATEEDKHVLGSALLCIAEVVGALKALAIPHL
PRLMPAVLHALSSRKEAGPGDVYLLSAVAALQRVAEALPHFISPYLQDVALQVCHLTHLV
QNSSSSSSSQLPVRLASLRKTLATQLPPRVLLPTLTRCYSSMVAGRKDQLGALMSLLKDH
INHMEKETLNVHQSELTTFFLSALDYRAQHGQVDLPRTWEVEGDVIECLIAMVMKLSEVT
FRPLFFKLFDWSKPEQVDRPDRRLTFVRLCDRVAERLKGLFVLFAGNLVQPFSEVLKQTS
GADADGLFGGSVESSSLLLQLVLDCLCKLFLYDTQRFLSRDRAQVLLGPLVEQLENRLGG
EQRYRDRVTHNLVPCLGQFSAALADESLWKNLNYQVLLKTRHADAKVRFSALLVLTELAS
KLKENYVVLLPETIPFLAELMEDECEEVEQQVQRVVQDMENILGEPLQSYF
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctctggcccaccagctgaagcggctggctctgccgcagagcgacggcgacctg
ctgacccgcagagatgtggcctccgtgctcttcgaccccaaagacgccgccgccatggac
cggagcaccttctacgccctcggctgcaccgggctggaggagctgctgggaatcgaaccg
gccttcctggagttccaggacacgctgttcagcccggcctcggtgacgctggagcgcagc
gtccagtcccgggaggtcaacgacaagctggacgccgggatctcgctgttcctgacccgg
ctctgcccctacttcctgctcaagcccgccctcaagtgcctggagtggctggtgcaccgg
ttccacgtgcacctgtacaacgtggacagcctgctggcctgctcgctgccgtaccacgac
accaacgtgttcgtcagagttctgcagctgctgaagatccgggacggaaccaaccgctgg
aactggctccacagtctgcagaaacccggcgtgcctctctccagggcggttctggtcgtc
cactgctactccgacctgagcttcatggacttcatctgcagcatggtgacccgctccatc
caggcgttctccggacactccacctccttctctcagctgaggatcatcttctctttcttc
gcctccaccatcgttgcagctctggattctgcagaaaacgtttctgacgccgtcatcgcc
aaactgctgccctacgtgcagaagggcctgcgctcccccctgccggactaccgggccgcc
ggctacatgctggtgtgccagctggcggtgaaggtggttctggagccggagctggtggag
cggctggccctgcagctcagcaagtccctggtccgggacccggttctggcccaggagggg
ctgggctgcctcaccgtgctgctgcagaaccagagggacggagccgccggccccagagcg
gcggcccagctgagctcggtaccggttctgtcctccacgctgcgggtcatggcggtgacc
cacgacgtgggcccgctgctgcggtacctgctgccccacctggtccgggccgggttctcc
tccggccggnctgagcaggagaactgggccgtgctggagaacatcctgagctccgtcccg
ctgcccaaggacctggaccggaccctggcccggctgatcctggtggggtacctgggtctg
acggaccggtccccccaggacctggaggccctggacccgctgctgctgcccctggtccgg
ctcctggagtccagatatcccggatccctggacgacgtcctggcgggtcacgtgaccgac
ctcagcgacccgcagcagaagcgcctgttccatcacttcctgtctctgtccacgggcggc
gggaaacaccagatcctggaggacttggacacgtcgctgctgctcagcctgaaacacccg
cgggcttcgatccggcgggcggcgctggaccggctggtggaggcggcaccgtccggacag
cagctgggtctggaccgggacttcctgaaggaggcggtggccgagcgtctgcaggacgac
gtcccggaggtggttctggccgcgctcagggttctgcaggtgctgctggacggcgaggac
ggcgtggacggcgaggactccgtgtcgtggctgctgtccctgctgctcagagccgatgcg
tcggagcctcagcgctggcggcccgtgctggaggagacggtgcgttcgctgtcccacccc
aggctgggaaaggcggacggcgagctgctgcagaagaccggctggagactcctgcccttc
ctggtggtcacgtccacgcagacgcagctggcccgggacctggcccactcccccctgctc
acccgacaccccctcacccaaaactgggcccaagagctggacaaagtgatgaagaggagc
tctgagcccgacttcgtcgggtcggccaaccagcgcctcgtctccacgctggccgggaac
ctggcccacatggagcacttcgccaagcgggaggcgctggagcagctggcggggctggtc
cagcagcgggggtccggtctccgggaccgggcctccttcctggtcctggtccagactctg
ctgcagagcctgacccagctgagtgagacggagcacctgctgacggcccagagagtctac
gccgccctggagccccccctgctggaggccgccgggacgccccgcacccaggaagctgag
ccggcggtctcggtgcccccgtccttctctgaggccgtgacgttgtacctgcgccggtgt
gagagccagaccggcccggtggaccccggggacccggactacacacgggtcctcatggct
ctgctgcaggacttcatctcctcactcaggtgtcccagcaccgccttcagaggggaggcc
tggtggaacccggagaagctggactccaacacctgctgctacctgggtctgctgggccgc
gtgttcggtctggttctggagggttctgccgagggcccggcgtcccgcggcttcagggac
ctgatgaagctgctggtgcaggtgcacctccccgaacccgcctccgtcttcagcttcctg
tccctgctgtgggggtacggcggtaaccacggcgaccagctggacctgaaggtgggcgtg
gtcctgcagacgcgggcgctgtacatgggcggagccctgctgagctcacagacccctgca
gcgctggagaagctgacagctgcagagtctccagtggtcccgtctctgctctgctgcctc
tcctccaccgtgcgggaggtccgacgggccgccctggccgccctgggcagcctatcagga
gccagcggctctcccttccagccaatcacagagcggctcctgcagacgggggaggagatc
agcaccgacccggcgtacctgagcacggcgctgggcgtcctccacgacgagtcttcgtgc
agcaagccgtcggcggcgcagaggaagctgcaggcggcgctgcagcagctgctgcgctgc
gtccagagccgcagctgcccgtcgtacagcagcgccgccctgctggacgcgctgggcctc
gtcagcggaacgtccgtcctggcgttgctgctgccggtcctggagcggctgctggagcag
acggggcccgacacgccgccactgctgcgggccgagacccggctgctgcggctggtgctg
aggaagtacgaggaggcgtcggcgccgctgctggcgcaggaccggacctgtctggacctg
ctggtccgagcgctgcggctgccgggcctgcagctgctggcgctggagcagatcaccaag
ccgttcttctcagccatcggcgacgacggcgtccagcagaagcttctgtccgtgatgttc
gacctcctggacggcgccgggccggcggcggccaacgccgtgggcggcgtcttcaaagcg
atcgccgtggacgcccagctggtggccaacgagctggcccccccccagaagcccagcgtc
agcgtgacggtccagcagacccggcgcagcaggatgagccgcaggaggcctcaggaggac
agcggtaccggtccagagggcggtaccggtccagagggcggtactggtccagacgctggt
accggtccggacggggacggcgggacggtcccgtggcagagggtcaccctggttctggag
ctgctgcagcacaagaagaagctgaagagagcccagacgctggtgccggttctgttctcg
ctgctggccaggagcctggagccgcgggccgctcggcaccacaacatggagtacaccaag
cagctgctgctcagctgtctgctcaacatctgcaccagactggagggggaggcaggggtc
ctggatgaggagcggttcagcgtggagctggtggtccagtgcatccgggggtccgaggtt
ccgcagacgcatcaccaggccctgctgctgctgggggcggcggcctccatcttccctgag
aaggtcctccacagcatcatgcccatcttcaccttcatgggcgccaacatccttcgcctg
gacgactcctacagcttcagggtgattgacaggacggtgcagacggtcatccccgccctc
atcaaggcccagcccagcccgtcctcctcccaggtggttgccgtggcgaccaggatcatg
caggtcttcgtggacgcgctgcctcacgtccccgaccaccgccgcctcgccctgctgacc
cggctggtgtccacgctgggccccgcccacttcctgtgggtgatgcagctgctgctgctg
cggctgcacgccacgcagagctccacccccaccagcgacagggacgaagcccaggagcgg
aacgctgaattctgggtaacgctgagctgccagttcggcgtgggcgagcagctcggctcg
ctggtggacgtcctgaagttcctgcagcagctgccggacgacaaggacgatgcaaagcgc
cccgccggccggccggcggcccggaagaagccgggcgacgtggagaagttggacgagctg
atcttcagcgtggaggctcacagcagcaaggagctgcggcacttcaagttcctctgcgtg
tccttcatgtcgcagctgctcaagtccagcagcttcgtccagaaggtggcggacggaggc
gaggacgtggaggcgtctctgcagccgctgcagcagaggctcctggaggaagtgctccgc
tacatccacagcgtggcgcgctgcgtggagaagaacgccgaccagcccaccgccaagttc
tggagagccctgctgaagcagagctacgacgtcctggacaaggtgaacgccctgctacct
gcagactccttcatcacggtgatccgggggctgatgggaaaccagctgccctccgtcagg
aggaaagctatggagctgctgaacaacaagctgcaccaccgcacgcagtgggacgagcag
caggtgacggcgctgctgcagctgacgggcgacctgctggccgtcgtgggtaagagcccg
gccaacgtgggcgcggcggaggaggcggagcaggccgtgaaccggcagacggcgctctac
agcctgaagctgctctgccgcagcttcggcgccggccaccaggaggcgttccggcccgtg
ctgctgcgcgccgtggaggtcgtcgtggcgacggaggaggacaagcacgtgctgggcagc
gcgctgctctgcatcgccgaggtggtcggcgcgctgaaggcgctcgccatcccgcacctg
cccaggctgatgccggccgtcctgcacgcgctcagtagccggaaggaggcggggcccgga
gacgtctacctgctcagcgctgtggccgccctgcagcgcgtcgccgaggcgctgccgcac
ttcatcagcccctacctgcaggacgtcgccctacaggtgtgtcacctgacccacctggtc
cagaactcgtcctcctcctcgtcctcccagctcccggtccgactggcctccctgaggaaa
accctggccacccagctgccccccagggtgctgctgcccaccctgacccgctgctacagc
agcatggtggccggcaggaaggaccagctgggggcgctgatgagtctcctgaaggatcat
atcaaccacatggagaaggagacgctgaacgttcaccagtcagaactcaccaccttcttc
ctcagcgcgctggactaccgcgctcagcacggacaggttgatctcccgaggacgtgggag
gtcgagggcgacgtcatcgagtgtctcatcgccatggtgatgaagctgtcggaggtcacg
ttcagaccgctcttcttcaagctgttcgactggagtaaaccggagcaggtggaccggccg
gaccggcgtctgaccttcgtccgtctctgcgaccgcgtggccgagcggctcaagggattg
ttcgtgctgttcgccgggaacctggtgcagccgttctccgaggtcctgaagcagacgagc
ggcgccgacgcagacgggctcttcggtggttccgtagagtcgtcatctctgctgctgcag
ctcgtcctcgactgcctctgcaagctgttcctgtacgacacgcagcgcttcctgagccgg
gaccgggcccaggtcctgctgggcccgctggtggagcagctggagaaccggctgggcgga
gagcagcggtaccgggaccgggtcacccacaacctggttccctgtctgggccagttctcg
gcggcgctggccgacgagtcgctgtggaagaacctgaactaccaggtcctgctgaagacc
cggcacgccgacgccaaggttcggttctcggccctgctggtgctgacggagctggcgtcc
aagctgaaggagaactacgtggttctgctgccggagaccatccccttcctggcagagctg
atggaggatgagtgtgaggaggtggagcagcaggtccagcgggtcgtccaggacatggag
aacatcctgggggaaccgctgcagagctacttctaa
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integrated database retrieval system
