Cololabis saira (Pacific saury): 133419777
Help
Entry
133419777 CDS
T09849
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133419777 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133419777 (lrrc4cb)
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
NGL family
133419777 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
133419777
NCBI-ProteinID:
XP_061565180
LinkDB
All DBs
Position
2:16170498..16237656
Genome browser
AA seq
632 aa
AA seq
DB search
MLNTMIYSLQSQIMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSVVKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSMVELNLAHNNLTFLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHAPSVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTNSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSMENNGVTYFTTVTVETIEPPEVDSQTPLPPFGFPH
LSSTTKGTPVSTRTTERTYTITVPDQDIEGALNGLDEVMKTTKIIIGCFVAITLMAAVLL
VIFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHIPLPPLEHYNHYNTYKSTYH
HPPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctactccctccagtcccagataatgagaggtcgtaggctgaag
ggggcactatccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
gggctggttcgtgctcagacttgtccttcagtctgttcatgcagtaatcaatttagcaaa
gtcatatgcacccgccgtggtctacgggatgtcccagatggcatttctaccaacactcgc
tacttgaacctccaggataacctgattcaggtcatcaaggtggacagtttcaagcatctg
cgccatctggagatactacaacttagcaagaatcacatccgcagcattgaaattggggct
tttaatggactagccagtctcaacaccctggagctcttcgataatcgactcacaacaatc
cccaatggagcatttgagtacttgtccaagctgaaggaattgtggctaagaaacaaccca
attgaaagtataccatcttatgccttcaaccgagtcccctcacttcgaaggctagatcta
ggtgaactcaaacgtctctcctacatttctgatggggctttcaaggacctgagcaacctg
cgctacctgaacctgggaatgtgtaacctcaaggagatacccaatattttgcctttggtt
aggcttgaagaactagaaatgtcaggtaaccagctgtctgttgtcaagcccagctcattt
acggggttagtgaatcttcagaagctttggatgatgcatgcacagatccaaactattgag
aggaattccttcgatgatcttcagtcgatggttgagctcaacctggctcacaacaatctg
acctttctaccacatgacctgttcacaccattgcatcatctagaaagagtgcacctccat
cacaacccctggaactgcaactgtgatatcctgtggcttagctggtggcttaaggagaca
gtacctgccaataccagctgctgcgcacgttgccatgctccttcagtcttcaaaggaagg
tacattggcgaactggaccacagctacttccagtgtgatgttcctgttattgtagagcca
cccagtgacttgaatgtgacggagggcatgggtgctgagcttaaatgtcgcacaaactcc
ctgacctctatctcttggctcacaccaaatggctccttggtcactcatggtgcttataag
gtgcgcttgtctgtactcaatgatgggacgctgaacttcactagtgttacaatgcaggac
acggggacttatacctgcatggttagcaacacagcaggcaatatttctgcttctgctgtg
ctcaatgtgacttctatggaaaacaatggggtgacctattttaccacggtcactgtggag
accattgagcccccagaagttgatagccaaacgccacttcccccttttggcttcccccat
ttgtcatcaactacaaagggtactcctgtttcaacaaggaccacagagcggacttacacc
ataacagttcctgatcaggatatagaaggagccctcaatggcctggatgaggtaatgaaa
acaaccaagattatcattggctgcttcgtcgccattacactcatggctgctgttctgctg
gttattttctacaaaatgagaaagcagcataaccaacaggacccagatggccctgcctcc
tcgatggaggtcattactgtagaagaagagcttgcaggtgttgctgctatggagaggcac
ataccgctcccccctctggagcactacaaccactacaacacctataagagcacttaccac
catccccctatgctcagtaccatacacagctcagcaacacaggaaccgttactgattcaa
gcctgctcaaaagacaatgtgcaagagacccaaatctga
DBGET
integrated database retrieval system
