Cololabis saira (Pacific saury): 133419806
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Entry
133419806 CDS
T09849
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419806 (vps35l)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Others
Retriever complex
133419806 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
133419806
NCBI-ProteinID:
XP_061565212
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All DBs
Position
19:24534484..24550443
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AA seq
968 aa
AA seq
DB search
MAAVQWRSRWRNYDDELQRFSPEGVPVEFGDYHPLKPIMVTDTKTRRGTRKGSTSSSSSS
SSSAPPDPLSSMLDGTDPLSMFAAASATETPSMSHSSSTGDIGRKKKEKEEEAVGPDFEP
WSSKRGEILARFTTTEKLSINLCMDSDRGKASSPGSSAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYDRIWTMCSDPRPLSDSFTVDDVNDTAKETCLNWFFKIASIRELLPRLYV
EIAILKCNRFLNKSGIQETLPRLTAMIRGIGDPLVAAYARAYLCRVGMEVAPHLKDCLNR
NFFDLLATFRQISGDSVQKQLVLQRVEVPVYLTLYSPAINWILQCIAYRAPEPLLTEMME
RCKMMANNALLLNSVMRAFRPEFVAARATDFIGMIKDCDESGFPKHLLFGSLGRGVACAD
PPEQERLTILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPD
RAFEDAYPQLQSVIRKILTYFQDFSVLFSMERFLPFLDMFQKDSVRVEVCKSIMEVFIKH
QVELTRDPVILNAMLHICKTMHDSVNALTLDDEKRSLSLLIIGFVRMVSFGRDFEQQLSF
CVEARASFCNLEPVLVQLIHTVNQLAMETKRVMRGSHSRKTAAFVRACAAYSFITIPSLS
SIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISVEGKLRSSESFLLDFI
NDFLATLLVVPDHPEHGVLYLVRGLLNMVQDYTWEENSDAKVRVYISALPLLAAMSQETY
LYSIPKVDSNETLYGGDPKFLSEINKLCETLIGQILDHLKALARDDQSVRRQSALAFALF
GVLLAHGDLRNNKLSQLAVNLWNLSHKQGYCDTRISVRTLEYIKHQTQQPDMAHLSDTVQ
RLALQSRT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagtggcgatcccgctggcgcaactatgacgacgagctgcagaggttc
agtcctgagggggttccggtcgagtttggagactaccatcccctcaagcccatcatggtg
acggatacgaaaacccgccgtggaacccgcaaaggcagcacctcctcatcttcatcctcc
tcttcctcagcacccccagacccgctcagctccatgctggacggcactgaccccctgtcc
atgtttgcagccgcctccgccaccgagactccgtccatgtcacacagcagctccacaggg
gacattgggaggaagaagaaggagaaggaggaagaagcagtgggaccagactttgaaccc
tggtcatcgaagcgaggggagatcctggccaggttcaccaccaccgaaaaactgtccata
aatctgtgcatggactctgaccgaggaaaagcctccagtcctggatcatccgctgtttcc
gagaaagttcgtactcgcctggaagagctggatgatctggaggagggttctcagagagag
ctgctgaacctctcccagcaggattacgccaaccgcatcgaggagctgaaccagtccctg
aaagaggcctgggcctccgaccagaaggtcaaagccctgaagattgtcatccagtgctcc
aagctcctgtccgacacgtcggtgatccagttttaccccagcaagtttgttctcatcact
gatatcctcgatacttttggccgcctggtgtatgacagaatctggaccatgtgttcagac
cccagacccttatctgactccttcacggttgacgatgtgaacgacaccgctaaagagacg
tgccttaactggttcttcaagatcgcctccatcagagagctgctgcccagactatatgtt
gaaattgccatcctcaagtgcaaccggttcctcaacaaatccggtattcaggagaccctc
cctcggctgacggccatgatcagagggattggagatcctctggtggcggcgtacgccaga
gcttatctctgcagggtgggcatggaggtggcgccccacctgaaagactgcctgaaccga
aacttcttcgacctgctggccaccttccggcagatcagcggagacagcgtccagaagcag
ctggtcctgcagagggtggaggtgcctgtatacctgacgctttactctccagccatcaac
tggatcctgcagtgcatcgcctacagagctccagagccgctgctaacggaaatgatggag
agatgcaagatgatggcaaataatgccttgctcctgaattcggtcatgagggcgttcagg
ccggagttcgtcgcagccagagccaccgacttcatcggtatgatcaaagactgtgatgag
tccgggttcccaaagcacctgctgtttggatctctgggtcgcggtgtggcctgcgcagat
ccgccggagcaggaaaggctgacgatcctgaacgaagcctggaaggtcatcaccaaagtc
cgcagtccccaggattacatcaactgtgctgaaatctgggtggagttcacctgccggcac
tttacaaaacgagaggtcaacacggttctggctgatatcatcaaacacatgacccctgac
cgagcgtttgaggacgcctaccctcagctgcagtcggtgatcaggaagatcctcacctac
ttccaggacttctccgtcctcttctccatggagcggttcctgccgttcctagacatgttc
caaaaggatagcgtgagggtggaggtctgcaaatctatcatggaggtcttcatcaaacac
caggtggagctcaccagagacccagtcatcctcaacgccatgcttcacatctgcaagacc
atgcacgactccgtcaacgccctgactctcgacgatgagaaaagatctttgtctctgttg
atcatcggtttcgtccggatggtctccttcggccgggactttgagcagcagctgagcttc
tgcgtggaggccagagcctccttctgtaacctggagccggtgctggtgcagctcattcac
acggtgaaccagctggccatggagaccaagagggtgatgagagggagtcactcccggaaa
acggccgcgtttgtcagagcctgtgctgcctacagtttcatcaccatcccgtctctcagc
agcatcttcagtcgtctcaacctgtatctcctgtctggtcaggttgcgttggccaaccag
tgtctctcccaggcggatgctttcttgaaagcagccgtcagtattcttccggaagttcct
cgctccatcagcgtggaggggaagcttcgctcttctgagagcttcctgctcgacttcatc
aacgacttcctggcaacgctgcttgttgtcccggaccatccagagcatggggtgctctac
ttggtccgtggtttgctcaacatggttcaggattacacctgggaggagaacagcgacgcg
aaggtgcgggtttacatcagcgctcttcctctgctggccgccatgagtcaggaaacgtat
ctttactccatccccaaagtggactccaacgagacgctgtatggaggtgaccccaagttt
ctatcagaaatcaacaagctgtgtgagactcttattgggcagatcctggaccacctgaag
gctctggcccgggacgatcaaagcgtacgtcgccaaagtgctctagccttcgctctattt
ggtgtcctgttggctcacggtgatctgaggaacaacaagctgagtcagctggctgtaaat
ctgtggaacctcagccacaagcaaggctactgtgacacccgcatctctgttcggactctg
gagtacatcaaacatcagactcagcaacccgacatggctcatctgtcagatacagtccag
aggcttgctctgcagtctcgcacctga
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