Cololabis saira (Pacific saury): 133419816
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Entry
133419816 CDS
T09849
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04136
Autophagy - other
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133419816
04136 Autophagy - other
133419816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419816
03029 Mitochondrial biogenesis [BR:
csai03029
]
133419816
Membrane trafficking [BR:
csai04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
133419816
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133419816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
CPSF_A
EIF3I
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_TEP1_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
133419816
NCBI-ProteinID:
XP_061565238
LinkDB
All DBs
Position
19:complement(27174616..27187540)
Genome browser
AA seq
443 aa
AA seq
DB search
MESQDAPESRGVHPGFICASFNQDTTSLSVGTKTGYRLFSVTAVDKLDCIHEGVECPDVY
IVERLYSSSLVVVVSLSMPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQRLVVCLEESI
YIHNIRDMKLLKTLLNTPINPSGLCALSVNQSNSYLAYPGSATIGEITVYDANNLSTVTL
IQGHDSPLAALTFNASGTKLASASEKGTVIRVFSVPEGQKLFEFRRGMKRYVSISSLSFS
ADAQFLCASSNTETVHIFKLEQHSPSQEEESPTWSAYVGKMFTAASTYLPSHVSDMMHQD
RAFATVRLNMFGLKNICALATIQKLPRLLVASSDGYLYIYNVDPQDGGECVLVQKHRLFE
SSEDQEEQKEEEDPDDVPPQPASQSYAATVALPSTPPSSTTLMGYSEDGGAQRGEVIPEH
EFAESPICLDDENEFPPVSNQSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccaggacgcgccggagagccgcggggtgcacccgggcttcatctgcgcctcg
ttcaaccaagacaccacttctctctctgtgggtaccaagactggctacaggctcttctct
gtcacagctgtggacaaactggactgcatccacgaaggagtagagtgtccagacgtctat
atagtggagcgattgtactccagcagtctggtagtggtggtcagtctgtccatgcccagg
cgaatgaacgtctaccacttcaagaagggtacagagatttgcaactacagctattccaac
aacatcctctctgtcagactcaacagacagcggctggtggtgtgcctggaggagtcgatc
tacatccacaacatcagagacatgaaactactcaagaccctgctcaacacccccatcaac
ccatcaggcctgtgcgcgctttctgtcaatcagagtaactcctacctggcgtaccccggc
agcgccaccatcggagagattacagtctacgacgccaacaacctgagcactgtgacattg
atccagggtcatgacagccccctggctgccctgacgttcaacgcctctggtacgaaactc
gccagtgcgtcagagaagggtactgttatcagagtgttcagcgttcctgaaggtcagaag
ttgtttgaattccggcgagggatgaagagatatgtgagcatcagttccttgtccttcagt
gcagacgctcagttcctgtgtgcctccagcaacactgagacagttcacatctttaaacta
gagcagcacagccccagtcaagaggaagaatctcctacctggtcagcatatgtgggcaaa
atgttcactgcagccagtacctacctgccctctcacgtctccgacatgatgcaccaggac
agagccttcgccactgtacgcctcaacatgtttggcctgaagaacatctgcgccctggct
acgattcagaagcttcctcgcctacttgtggcatcctcagacgggtatctttacatctac
aacgtggatccgcaggatggaggcgagtgtgtccttgttcaaaaacacagactctttgaa
tccagtgaggaccaagaggaacagaaggaagaggaggacccagatgatgtccctccacaa
ccagccagccaatcatacgctgccactgtggctctcccttcaactcctccctcatccacc
accctcatgggctactctgaagacggtggagcccagaggggtgaggtcatccccgaacac
gagtttgcggagagtcccatttgtctcgatgacgagaacgaatttcctccagtcagcaac
cagagtaactaa
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integrated database retrieval system
