Cololabis saira (Pacific saury): 133419818
Help
Entry
133419818 CDS
T09849
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419818 (lingo1b)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133419818 (lingo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_Zer-1
LRR_R13L1-DRL21
Ig_C17orf99
LRR_LRWD1
LRRNT
V-set
C2-set_2
p12I
Motif
Other DBs
NCBI-GeneID:
133419818
NCBI-ProteinID:
XP_061565242
LinkDB
All DBs
Position
2:complement(16640320..16665569)
Genome browser
AA seq
623 aa
AA seq
DB search
MTVLVSRRMVSGEAGGQSYLVACWQPILILMLGTVLSGSTTGCPSRCDCQGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLKTLGPEEFINYPQLEELQLNENTISSIEPGAFSNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGYKLASVPTDALSHLHNLLSLRLCCLNVTVIRDYSFKRLY
RLRVVEISHMPALDTMTPKSLFGLNITSLSITNCNLTVIPYQAISHLRFLRFLNLSFNPI
HTVEGNQLFNLQKLQAFHLAGGKLLVIEPYSFRGLNHLRVLNVSNNNLSTLEESVFHSVG
NLETLALYNNPLACDCRLLWVFRRRWRLNFNKQQPVCASPEVVQGKEFKDFPDKLPSDYF
TCQKSKIVDYNVQESHVDEGTTVNFACQAEGDPVPVIMWLSPKKEYVTTKTVGTRLSVSI
EGSLEVRYAQIQDNGTYTCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRTTVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDNTKSSIEVEYV
PRKEETEESSPTEPPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtaagcagaaggatggtgtccggagaagcaggggggcaaagctacttg
gtggcgtgctggcagcccatcctgatcctgatgctgggcaccgtcctttctggctccacc
actggctgcccctcccgatgtgactgccagggtcaggaacgttcagtcgtgtgccatcga
cggagattggcagctcttcctgagggtattcctactgaaacaaggctattagacctcagc
aagaaccgtctgaagaccctggggcctgaggagttcataaactatcctcagctggaggag
ttgcaactcaatgaaaatactatttcatccattgagcctggagcatttagcaaccttatg
aacctccgaactctaggtttgcgcaacaaccagctgaagctcattcagctgggggtgttc
acaggtttgaccaaccttacgcagctggatataagcgaaaacaaaattgtcattctactc
gactacatgtttcaagagctgtacaatctgagggctttggaggttggtgacaatgaccta
gtcttcatctcaccacgatcatttcacggcctcagcaacctcgaaagtctaaacattgag
ggatacaaactggcgtcagtgcccacagatgcccttagccatctgcataacctgttgtca
cttcgattatgctgtcttaatgtcactgtcataagggattactcctttaagaggctttat
cgattaagagtggttgagatttcacatatgcctgctctggataccatgaccccgaaaagc
ttgtttggactcaacattacatcactatccataacaaactgtaatcttactgtcatcccc
taccaagccataagtcaccttagatttcttcggtttttgaatttgtcttttaaccccatt
catactgtggaagggaaccagctcttcaatctacagaagcttcaggcttttcatttggct
ggtggcaaattgctggtcattgagccctactctttcagagggctcaaccacctccgtgta
ctcaatgtatcaaacaataacttgagcaccctggaagagtccgtttttcactccgtggga
aatctagagaccttggctttgtataataaccctttggcctgtgactgtcgcttgctttgg
gtgtttcgcagacggtggaggctcaactttaacaaacaacagccagtttgtgcttcgcca
gaggttgtgcaaggaaaggagttcaaagattttccagacaaactcccttctgactatttc
acgtgccagaaatcaaagattgtggattacaatgttcaagaaagccatgtagatgaagga
actacagttaattttgcttgtcaggctgaaggagatccagttcctgtgattatgtggctg
tcccctaaaaaggaatatgtcactaccaagactgtggggacaagactctctgtgtctatt
gaaggttcattagaggtgcgctatgcccaaatccaagacaatggcacctacacatgcatt
gcaagtaatgcagctggcaatgacactaaagctgctcacctttttgtgcatagctactcc
ccgaattggccccaccagccaaacaagacatttgctttcatttccaaccagccaagtgat
gaaggtgctaatgtgacccggaccacagttccatttccatttgatgtaaagacactgatc
attgcaactaccatgggctttatctctttccttggagtggtactcttctgtcttgtaata
ttattcctctggagcagagggaaagacaatacaaagtcaagtattgaggttgaatatgtg
ccacgtaaagaggaaactgaggaatccagtccaactgagccccctgtacaattcaacatg
aaaatcatgtga
DBGET
integrated database retrieval system
