Cololabis saira (Pacific saury): 133419831
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Entry
133419831 CDS
T09849
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133419831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133419831
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
90S particles
GTPase
133419831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA
AAA_22
nSTAND3
AAA_16
PduV-EutP
RNA_helicase
AAA_14
Spore_III_AA
AAA_18
Motif
Other DBs
NCBI-GeneID:
133419831
NCBI-ProteinID:
XP_061565271
LinkDB
All DBs
Position
19:complement(561130..592336)
Genome browser
AA seq
1196 aa
AA seq
DB search
MDSKQQKKQKQHQQKHSGPKAEKKKKKLGIAAEDDERRRNPKAFAVQSAVKMAKTFHRAQ
DLKTKKHHVPLVDRTPLEPPPVVVIVIGPPKVGKTTLIRALIKNFTRQKLGDICGPVTIV
SGKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMG
VLTHLDSFRNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFISV
MKFRPLVWQGSHPYVLVDRMEDLTDPEKLRTEPKCDRTVSLYGYLRGTNLKNKGQVHIPG
VGDFQVADVNFLPDPCSLPDAQKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDVPASHV
HQQQEEVRPSTELVQSLIDTHATLDAKMAASKVSLFSGSASLDPADVDQQTGELDGRREE
LVFDPNTNRERRKVVFAEEDEGSDEDEEEEEGSEEEEDDGEDHDSDAGEEDEDLSAFLSK
TRAECEKTTPAKKKQKLEENDAVAEIPAFADSEDDLEKSEDEEEEEAGDSGNSSEDEEES
GEEEEEEMEEPQQKESEEEEEEEQGSLRWKDGLQQKAQDVFLRQQEATPNLKKLVYGSGT
STQQEEEEDEEELGGLFRVSRPQKTKILQTNGLDCSRFPTEGGRDWDLEETLSSIRDCFV
TGKWEEDRDAATLLQEDDEMFGDFEDLETGEVHKNQNQGGPKDREQGSEDDEEEDDDDED
EEESPPVKLDDDELLKNKRLEKKRRLKQRFDSEYDDDDKDATYFDDLKEELQKQAQINRA
EFQGLDDETRVQYEGFRAGMYVRVEIPALPCEFVSRFDPRYPIILGGLGCSEGNVGYLQM
RLKKHRWYPRTLKTRDPLILSLGWRRFQTVPLFHIQDHNGRNRLLKYSPLHMHCGASIWG
PITPQGTGFLALQTVHGVKSNFRIAATGVVLDLDKSVTIVKKLKLVGYPDKIFKNTCFVK
GMFHSELEVAKFEGASVRTVSGVRGQIKKALRTPPGSYRATFEDRLLMSDIVFLRSWFPV
SVPQLYNPVTSLLLPAGQKDGWSGMRTLGQLKQDLGVRNRPNTDSLYKPIARAPRTFNRL
HIPNHLQKALPFKSKPKQQQKKEGPTRDLQRPRVIREPHERKVAALLQALSTVHNQRKKK
LQAQHRSQHKLFLQQKQQQAEERMRREKEIRKKLFRVKGQAEQRKQRSSLKGGQDD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggactccaagcagcagaagaagcagaagcagcaccagcagaaacacagcgggcccaag
gccgagaagaagaagaagaagttgggcatcgcggcggaggacgatgaacgacgacggaac
cccaaggccttcgccgtccagtcggccgtcaagatggccaagaccttccacagggcccag
gacctgaagaccaagaagcaccacgtccccctggtggaccggacccccctggaacccccc
ccggtggtggtgatcgtgatcggaccccccaaggtcggcaagaccaccctgatccgggcc
ctcatcaagaacttcacccgccagaagctcggggacatctgtggacccgtcaccatcgtc
tcaggtaagaagaggcgtctgaccttcatggaatgcaacaacgacatcaacaccatgatc
gacctggccaaggtggccgacctggtgctgatgctgatcgacgccagcttcggcttcgag
atggagacgtttgagttcctgaacatctgccaggtccacgggttcccccggatcatgggg
gttctgacgcacctggactccttcaggaacaacaagaccctgaggaagaccaagaagaac
ctgaagcaccggttctggaccgaggtgtaccagggagctaagctcttctacctgtccggg
atggtttacggcgagtaccagacgcaggaggtgaaaaacctcggccgcttcatctctgtc
atgaagttccgtcctctggtgtggcaaggctcgcacccttatgtgctggtggaccggatg
gaggacctgacggacccggagaagctccggacggaaccaaagtgtgaccggacggtttcc
ctgtacggctacctgagagggacaaacctgaagaacaagggccaggttcatatcccaggc
gtcggggacttccaggtggccgacgtgaacttcctgccggacccgtgctccctgccggac
gctcagaagaagagagctctgaacgagaaggagcgactgctgtacgcgccgatggccggc
gtgggcggggtcgtgtacgacaaagacgccgtttacatcgacgtcccggccagccacgtc
caccagcagcaggaggaggtccgaccctccaccgagctcgtccagtctctcatcgacact
cacgccactctggacgccaagatggccgccagcaaggtctctctgttcagcggctcggcc
tcgctggacccggcggacgtcgaccagcagaccggagaactggacggacgtcgggaggaa
ctggtttttgatcccaacaccaaccgagagagaaggaaggtggtgttcgccgaggaggat
gaaggcagtgatgaagatgaggaagaggaggaaggcagtgaggaagaggaagacgacggg
gaggatcacgacagtgacgcgggtgaagaggacgaggacttgtcagcgtttctctcaaag
acgagagctgagtgtgaaaagacgacaccagcgaagaagaaacagaagctggaggagaac
gacgccgtcgctgagattccagccttcgccgacagcgaggacgatctggaaaagagtgaa
gacgaggaggaggaggaggcaggagactctggaaacagttctgaggacgaggaagagagt
ggagaagaagaagaagaagagatggaggaaccacaacagaaggagagtgaagaagaagaa
gaagaagagcagggatctctccggtggaaggacgggctccaacaaaaggcccaggacgtg
tttctacggcaacaggaggccacgcccaacctgaagaaactggtctacggttccggtacc
agcacccagcaggaggaagaggaggatgaggaagagctgggcgggctgttccgggtcagc
cggccccagaagaccaagatcctccagaccaacggactggactgttccaggttccccacc
gaggggggacgggactgggacctggaggagactctgtcctccatcagggactgctttgtg
acggggaagtgggaggaagatcgagacgccgctacgctgctgcaggaggacgacgagatg
ttcggggactttgaagacctggagactggagaagttcacaaaaaccagaaccaggggggg
ccgaaggaccgggagcagggcagtgaggatgatgaggaggaggatgatgatgatgaggat
gaggaagagtcccccccggtgaagctggacgacgacgagctcctgaagaacaagcgtctg
gagaagaagcggcggctgaagcagcgcttcgactcggagtacgacgacgacgacaaggac
gccacgtactttgatgacctgaaggaggagctgcagaagcaggcccagatcaaccgggcg
gagttccagggcctggacgacgagacccgggtccagtacgagggtttcagagccggcatg
tacgtccgggtggagattcccgcgctgccctgcgagttcgtcagccgcttcgacccgcgc
tatcccataatcctcgggggcctgggctgcagcgagggcaacgtgggctacctgcagatg
cgtctgaagaagcaccgctggtacccgcggaccctgaagacccgggaccccctgattctg
tctctgggctggagacggttccagacggtcccgctgttccacatccaggaccacaacggc
cggaaccggctgctcaagtactcgcccctgcacatgcactgtggggcctccatctggggt
cccatcaccccccagggaaccgggttcctggctctgcagaccgtccacggagtcaagtcc
aacttccggatcgcggccaccggcgtggtcctggacctggacaagtccgtcactatcgtg
aagaagctgaagctggtcgggtatccggacaagatcttcaagaacacctgctttgttaag
ggaatgttccactctgagctggaagtagctaagtttgaaggagcgtcggtgaggacggtg
tcgggggtcagaggtcagatcaagaaggccctccggacccccccggggtcgtaccgggcc
acgtttgaggaccggctgctgatgagcgacatcgtgttcctccggtcctggttcccggtc
tcggtaccgcagctctacaacccggtcacgtctctgctgctgccggcgggtcagaaggac
ggctggtccggcatgaggactctgggccagctgaagcaggacctgggggtccggaaccgg
cccaacacggactctctgtacaagccgatcgcccgggccccgcggaccttcaaccggctc
cacatccccaaccacctgcagaaggccctgcccttcaagagcaaacccaagcagcagcag
aagaaggagggcccgacccgggacctgcagagaccccgggtgatccgggaaccgcacgag
aggaaggtggcggcgctgctgcaggctctcagcaccgtccacaaccagcggaagaagaag
ctgcaggcgcagcatcggtcgcagcacaagctgttcctgcagcagaagcagcagcaggcg
gaggagcggatgaggagggagaaggagatccggaagaagctgttccgggtcaaagggcag
gcggagcagaggaagcagaggtccagcctgaagggggggcaggacgattag
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integrated database retrieval system
