Cololabis saira (Pacific saury): 133419932
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Entry
133419932 CDS
T09849
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04814
Motor proteins
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133419932
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133419932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133419932
03036 Chromosome and associated proteins [BR:
csai03036
]
133419932
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133419932
Membrane trafficking [BR:
csai04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133419932
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
133419932
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
133419932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
133419932
NCBI-ProteinID:
XP_061565384
LinkDB
All DBs
Position
20:25989374..26003103
Genome browser
AA seq
1244 aa
AA seq
DB search
MSSAGTGESGKAPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDEAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQIQVVEDGSRATSPEAPEPSFTKMQKLKDIQETPKTTRQTPA
NIKKSSTRRSGKASRESLSVSASGDVGDASLSSKQSALGAPVMPQPAGSPAASSAPVPAA
PSKVEPAVSKQEEESLRAQVKDLEEKLETLKMKRTEDKAKLKELEKHKIQLEQLHEWKTK
MQEQQAELQKQLKEAKKESREAQEAKDRYMEEMADTADAIEMATLDKEMAEERAESLQVE
VDTLKEKVEELSMDLEIIRHEISEKGSDGAASSYQVKQLEEQNSRLKEALVRMRDLSSSE
KQEHVKLQKQMEKKNTELETLRTQKEKLQEEVKKSEGTIDELKEQVDAALGSEEMVETLT
ERNLDLEEKVRELRETVTDLEAINEMNDELQENARETEMELREQVDMGGAKVREAEKKVE
AAQETVADYQQTINKYRELTASLQEANRELISQQSANAEQVQQPPAELFDFKIKFAETKA
YAKAIEMELRKMEVAQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLTCKAELISK
QAQEKFDLNGNLVQGPGLRGPPGEQRSFASGLVYSLSLLQATLHKYEQALNTCGVEVFKR
MGTLYSEMSFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKYYQQLYSVHLADQTEDCTM
QLADHIKFTQGALDCMGVEVGRLRAFLSAGQESSGFTVLLKDLDTSCSDIRQFCKKIRRR
MPGTDVAGVPAALTFGPQVSETLTECRRQLTRVVAVLQEVAAAGAQMVAPLGEQEGLNAL
KLEDIAYKAAEQIYGSHSVSGPEFLRQSCTTVIATMNKMATAMQEGEYDAEKPQAKAPPV
EGRASTVRAELTDAEGLGIKLEDRETVIKELKKSLKIKGEELSEAHVRLSLLEKKLDNST
KDADERVEKIQTKLDENLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRISAQSKMT
IEGLRGPPASGIASLVHGSPGVPPSMAGATHVVDSPLLRQQVEAQRLGIKFLKNENNRLK
AEKVRAQLASLPPLCPPKLPKAAKESSMPPEGLNTGIYRRTDQLLATLLKLSAEVKVVDI
TGKTTVSAGAQMLEQTARLRNLSDALDKLKGEVAEHVVSFQPGAKASTNFATFPVTSFVK
AKNEKQEGTVFVGRVGIPCSRGQEQVHRLVLSQQQLQRVHRLLS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgcaggaacaggggagagtggtaaagcgccaaagattggctccatagtagag
gtgacgggaaagggtcagcgaggcaccgtcgcctacattggtgccaccctctttgcttcg
ggtaaatgggtgggcgtgatcctggatgaagccaaagggaagaacgatggaaccgtgcaa
gggaagcgctatttcacctgtgaggagaatcatgggatatttgtcaggcagtcccagatc
caggtggtggaggacggctccagagccacctcacctgaagctcctgagcccagctttaca
aagatgcagaaactaaaagacatccaagagactcctaaaacaaccagacagacaccagca
aacattaagaagtcctctacccgccgctctggaaaggcgtcccgtgagagcctctcagtg
tctgcgtctggagatgtcggcgacgcgagtctgtcctcaaagcagagcgctcttggagct
ccggtcatgcctcagcccgccgggtcacctgcagcctcgtcagccccggttcctgctgct
ccaagcaaggtggaaccagccgtatcaaagcaggaggaggaatcgctgcgagctcaagtc
aaggacctggaggagaagctggagactttgaagatgaagaggacggaggacaaggccaag
ctgaaggagctggagaaacacaagatccagctggagcagctgcacgagtggaagaccaag
atgcaggagcagcaggccgagctgcagaagcaactcaaggaggccaagaaggaatcccgt
gaggcacaggaggccaaagaccgctacatggaagagatggcggacacggccgacgccata
gaaatggccacgctggacaaagagatggccgaggagcgagctgagtcactgcaggtggaa
gtggacacgctgaaggagaaggtagaggagctctccatggacctggagatcattaggcat
gagatttcagagaaaggttcagatggagctgcctccagctatcaggtcaaacagctggag
gagcagaacagccgactgaaggaggcattggtcaggatgcgggacctgtctagctcggag
aagcaggagcacgtgaagctgcagaagcagatggagaagaagaacactgagctggagact
ctgaggactcagaaggaaaaactgcaggaggaagtgaagaaatcagagggcacgatcgat
gaactgaaggagcaggtggacgctgctctgggctccgaggagatggtggagaccctgacg
gagaggaacctcgacctggaggagaaagttagagagctgagagagacggtcacggatctg
gaagccatcaatgaaatgaatgacgagctccaggagaacgccagagagacggagatggag
ctgagggaacaggtggacatgggtggagcaaaggtcagagaggcagagaaaaaggtggaa
gcagctcaggagacggtagctgactaccagcagaccatcaacaagtacagagagctcacc
gcctcgcttcaggaggccaacagggagctgatcagtcagcagagtgccaatgcagaacaa
gtccagcaaccgccggctgagctgtttgacttcaagatcaagtttgcagagaccaaggct
tatgcaaaggccattgagatggagctgaggaagatggaagtggcccaggccaacagacag
gtgtccctgctcacctccttcatgccggactccttcctccgtcacggtggagaccacgac
tgcatcctggtgctgctgctcatccccaggctcacctgcaaggctgagctgatcagcaag
caggcccaggagaagtttgacttgaacgggaacctggtccagggtccggggctccgaggg
cctccaggggagcagcgcagctttgcttccggtctggtgtactccctcagcctgctgcag
gccaccctgcacaaatacgaacaggctcttaacacctgcggtgtggaggtttttaagcgc
atggggacactttattctgaaatgagcttccatgagcgctccctggattatttcattgac
ctgcttcataaagaccagctcgatgagaccgttcaggtggaacccctgaccaaggccatc
aaatactatcagcaactgtacagcgtccatctggcagatcagaccgaggactgcacgatg
cagctggccgaccacattaagtttacccagggtgccctggactgcatgggagtggaggtg
ggccgtctgcgggccttcctgtcagcaggacaggagagctctggtttcactgtcctcctg
aaggacctggacacttcctgctctgatatcaggcagttctgcaagaagatccggcgccgt
atgcctgggacagatgtagccggagtccccgccgctctcaccttcggaccgcaggtgtca
gagaccctgacggagtgcaggcgccagctgacccgcgtggtggccgtgctgcaggaggtg
gctgcagccggagctcagatggtggctccgctgggggaacaggagggtctcaatgcgctc
aagctggaggatattgcatacaaggctgcggagcagatatacggctcccacagcgtgagc
ggcccagagtttctgcgacagtcctgcaccactgtcatcgctaccatgaacaagatggct
acagccatgcaggaaggagagtacgatgctgaaaaaccacaagcaaaggctcctccggtg
gaggggagggcatcgacggtcagagctgagctaaccgatgcagaggggcttggaatcaag
ctagaagacagagaaacggtcatcaaggagctcaagaagtctctcaagattaagggtgag
gagctgagcgaagctcacgtccgcctgagcctcttggagaagaagctggacaactccacc
aaagatgcggatgaacgtgtggagaagattcagacgaaactggatgaaaaccttgcccta
ctcaagaagaaagaaaaggagtttgaggagacgatggacgctttgcaggccgacatcgac
cagctggaggcggagaaggcggagctgaaacaacgcatcagcgctcagtccaagatgacc
atcgaaggcctgagaggcccgccggcctcaggaatcgcctccctcgttcacggatctcca
ggtgttcctccgtccatggctggggcgacgcacgtggtggactctcctctcctcaggcag
caggtcgaggcccagagactgggaattaaattcctcaagaatgagaacaacagactcaag
gcggagaaggtgagggctcagctcgcctccctgcctccactttgccctccaaaactcccg
aaagcagccaaagaaagctccatgcctccggagggactaaacacgggcatctaccgccgg
accgaccagctgctggccactttgctcaagctgagtgcagaagtgaaagtggtggacatc
actgggaagaccacagtcagcgccggtgcccagatgctggagcagacggccagactgagg
aatctcagcgacgctttggacaagctcaagggcgaggtagccgaacacgtggtctcgttc
caaccaggagcaaaggcttccaccaactttgccacattcccagtcacctcctttgtcaag
gccaagaacgagaagcaggagggaacggtgttcgtagggcgcgtggggatcccgtgcagc
cgcggccaggaacaagtccaccgcctggtcctgtcgcagcagcagctgcagcgggtgcac
cgtctcctgagctaa
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