Cololabis saira (Pacific saury): 133420055
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Entry
133420055 CDS
T09849
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133420055 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133420055 (dtx4a)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133420055 (dtx4a)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133420055 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-RING_Vps41
zf-UDP
WWE_5
zf-ANAPC11
PHD
Motif
Other DBs
NCBI-GeneID:
133420055
NCBI-ProteinID:
XP_061565600
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All DBs
Position
20:complement(32956337..32986852)
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AA seq
774 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSGPRCASVVLGQVDPRLSPYIIDLH
SMHQFRQDTGTLRAVRRSFYDPNSAPGQGWLWEWENDAGSWTAYDTEVGIAIQAACDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKSHHAWGSMSMS
GHGGFLGVDTSGVGMGIRMSSGGTGNGSAYPSGALPASAITSLGQPCACQQCMLVLGVKT
GTMATAHTLGRRPPQTKPPSPKFSSYPVPGGSSYSLTLPRPPSLSRSLFPHRTSIVGATG
GFNVAGMGSSGGLGVVGASSVGSATLGPGGGYTHSLSLLGSATASLSISSTRPPPPPLPP
PPPPPPPPSSTIPSSAVTSLPHPSTSSSLSITCSAPAAPAPAPPLISTAASTCTPSPSAR
VLGPVSSSGAAACTAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSP
VHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARK
GKTPEEVVKRYLQKVRNLPEEDCTICMEPLAGPSGYKGPGVSGISRAESVGRLAQCGHQY
HLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRII
YNIPPGIQGPEHPNPGKPFTARGFPRHCYLPDSEKGRKVLRLLLVAWDRRLIFSVGTSST
TGESDTVIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELRAQGITEEECLPRD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttattagcatccgccgtggtggtctgggaatggctgaacgagcacgggcgctggcgg
ccgtacagcccggctgtgtgtcatcacatcgaggcggtgatccggagcggcccgcgctgc
gctagtgtggtcctcggccaggtggacccgcgcctctcgccctacatcatcgacctgcat
tccatgcaccagttccgtcaagacacaggtacgcttcgagctgtacggcgtagcttctac
gatcccaactcggcgcccggtcaaggctggttgtgggagtgggagaacgacgccggcagc
tggaccgcgtacgacacggaggtggggatcgccatccaggcagcttgtgaccgacagcag
ccctggctagacctggcgccacttggtttctgctacctcattgactttgaaagcatgacc
caaatcaatggacagacccagcgttgcagacgcatccaacgacgctctgacctggcttac
cctcttgtgtccggccccctacccaaatcccaccatgcctggggttccatgtccatgtcc
gggcatggaggatttctaggcgttgacacatccggtgtaggtatggggatcaggatgagc
agtggtgggactggaaacgggagtgcgtatcccagcggggcgctccctgcttcagccatc
acctcgttgggacagccctgtgcctgtcagcagtgtatgctggtgcttggtgtcaaaaca
ggtactatggcaactgctcacaccctgggccgaagaccgccgcagaccaaaccacccagt
cccaaatttagcagttatccggtcccaggaggctcttcttactccctaaccctccctcgg
cctccatccctgtccagatcccttttcccacacaggacgtctatagttggtgctacaggt
ggtttcaatgtagccggaatgggaagttcaggagggttgggtgttgtcggtgctagcagt
gtggggagtgccaccctcggtcctggagggggctacacccactccctttcccttctgggg
tcggccactgcctctctctcaatctcttctactcgtcccccacctcctcctctcccacct
cctccgccaccgccacctccaccttcttccaccattccttcatccgctgtgacctccctc
cctcacccctctacctcctcctctctctccattacctgctctgctcccgcggcacccgcc
cccgccccacctctcatctccacagctgcctccacctgcacgccctcaccttctgcccgc
gttctgggtccagtgtcttcatctggtgctgctgcctgcactgctcctctgccgcctcgg
tccagcctggcaggcctgagtcgtcctgctctgcagcgtatcgctatggctcagtctcgg
gcccttatcgcttctggagtgccaacagttccggtgaagaacctgaatggatccagccct
gtacatcctgcactggcaggcatcacagggatcctaatgagtgcagcaggacttcctgtt
tgcctgacccggcctcccaagctggtgcttcaccctcctcccgtcagcaagagtgacatc
aaacctgtgccggggctgggccactgctgtcgcaagaccaccaagaaacaggcccggaaa
ggcaagacacctgaggaagttgtgaagcgctaccttcagaaagtccgcaatcttccagag
gaggactgcaccatctgcatggagcccctggcgggcccctcgggctacaagggtcccggc
gtcagcggcatctcccgggccgagtcggtgggccgcctggcacagtgtggtcaccagtac
cacctccagtgcctcgtcgccatgtacaacaacggcaacaaggacggcagcctgcagtgt
cccacctgcaagaccatctacggggtcaagaccggcaatcagccccccggcaaaatggag
taccacgtcatcccccactcgctgcccggacatcctgactgcaaaaccatccggatcatt
tacaatatccctcctggcatccagggccctgaacacccgaatccaggcaaacctttcact
gctcgtgggttccccagacactgctacctccctgacagcgagaagggccgcaaggttttg
aggctgcttctggtagcatgggaccgccggctcatcttctccgtggggacgtccagcacc
acgggcgagtcggacacggtgatctggaacgaggtgcaccacaagacggagttcggctcc
aacctcacgggccacggctaccccgaccccggccatctggacaacgtcctggaggagctg
cgggctcagggcatcaccgaggaggagtgtctccccagagactga
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