Cololabis saira (Pacific saury): 133420101
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Entry
133420101 CDS
T09849
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133420101 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133420101 (chrnb1)
Ion channels [BR:
csai04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
133420101 (chrnb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
133420101
NCBI-ProteinID:
XP_061565657
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All DBs
Position
20:complement(24351165..24383992)
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AA seq
492 aa
AA seq
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MKSLDVFLLAGCLCSLSALGGADDVEKALMVKIFSGYNLKVRPARVPEERVVVRVGMILS
SFVGLNMKNEEMSTVVVMNLEWTDHRLTWKPKENNGIEVLRVPAAKVWLPDIVLINNNDG
VFDVALRVHVQVYSNGRVTWMPPALYCSSCGVQVEYFPFDWQNCSMRFRSYTYDLTEIDL
QYALDSRGNEIREIQLDDGFSESGEWYVRHRPCKKNMNDDLYEEMTFYLIIERKPLYYII
NIIIPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKIPETSLGVPIIVN
YIMFTMILVTFSVILSVVVLNLHHRSSNTHKMPMWIRKIFIHILPPYLCMLRPKVEIPLS
LKFNPRREKAIISISKVCDEYFIRKPDSSILFPNPNRYQPEGMITDLKKFIDGPSSYLTL
PDELKSAMEAISYIAENLQGEKDYEALKEDWQYVAMVVDRMFLWIFVIFTTVGTLAIFAD
ASLNFTPTEPFK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcctggatgtgttcttgttggcaggctgcttatgcagcctgagcgcattggga
ggcgctgacgacgtggagaaggcgctgatggtgaaaatcttttctggctacaacctgaag
gtccggccggcacgcgtcccagaagagagggtggtggtccgcgtggggatgatcctctcc
tccttcgtgggactgaatatgaaaaatgaagaaatgagcacagttgtcgtcatgaatctg
gaatggacggatcatcggttgacatggaagccgaaggagaacaacgggatcgaggtgttg
cgtgtccccgccgcgaaggtgtggcttccagacattgtcctcattaataataatgatggg
gtgtttgacgtggccctgcgcgtccacgtccaggtctacagtaatggcagggtaacctgg
atgccccctgcgctttactgcagctcatgtggagttcaggtggaatattttccattcgac
tggcaaaactgcagcatgcggtttcgctcctacacctacgacttgacagagattgacctg
cagtacgcgctggactcaagaggcaatgagatccgggagatccagctagacgatggcttt
agtgaaagtggggagtggtacgtcagacacaggccgtgcaagaagaacatgaacgatgac
ctctacgaggaaatgaccttctacctgatcattgagcggaagcctctgtactatatcatc
aacatcatcatcccctgcatcctcatcactatcatcgccatctttaatttctacctgcct
cccgacgcaggtgagaagatgggactgtccatcaatgtgctgctcacactcactgtgttt
ctgctgctgctggcggataaaatcccagagacctcgctgggcgtcccaatcatcgtgaac
tacatcatgttcactatgatcctggtgaccttctctgtcatcttgagcgtagtcgtcctc
aaccttcaccatcgctcctcaaacacccacaagatgcccatgtggatccgaaagatcttc
atccacatcctgcctccttacctgtgtatgctgcggcccaaagtggagatcccgctgtcc
ctcaagttcaatccccgtcgcgagaaagccataatcagcatcagcaaagtctgcgacgaa
tacttcatccgaaagcctgactcctccatcttgttccccaatcctaacaggtaccagcca
gagggcatgatcacagatctgaaaaaattcattgacggtccaagtagttatctgacgcta
cccgacgagctcaagtcagccatggaggccatctcatacatcgcagagaatctgcagggc
gagaaggactacgaagctctgaaggaggactggcagtacgtggccatggtggtggaccga
atgttcctctggatctttgtcatcttcacaactgtgggcaccttggccatctttgctgac
gctagtttaaacttcacccccactgagcccttcaaatag
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