Cololabis saira (Pacific saury): 133420127
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Entry
133420127 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133420127
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133420127
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
LRR_6
NOD2_WH
LRR_1
PRY
LRR_4
SPRY
AFG1_ATPase
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
133420127
NCBI-ProteinID:
XP_061565694
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Position
20:4969425..5098981
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AA seq
1303 aa
AA seq
DB search
MDQCEDGEDGVPPSKTSLCGEHESRSKAQRNQPGPGPEPGPGPGSGPGPGPGPGPEPGSG
PEQGPSCVSLKSDRLKDLIVFFEGDQHSAGKRIHQKGDSLEHEPSCLSLKSDWSRDWFID
FKGDQRSSSERVDQQISESPSGPSVQQHQTQLDSIFQVLEDDIVMFVKDELKKIQKVLSP
DYPESSESLEEDEDEEQKSIRETLVKITVKFLRRRKQEKLADLLQSNTVAAVCQSKLKGQ
LQKKHQHVFEGIIKAGKKTRLEQIYTGLYITEGGTGEVNEEHEVRQIEAASRKPDGAETA
IRQEDIFKLPPGRGGPIRTVMTKGVAGIGKTVLTQKFSLDWAEGRTNQDIQFLLPFTFRQ
LNVLREEKFSLVELVHRFFTETKGICNFEEFQVVFIFDGLDEYRLPLDFHNSTIVGDPRR
STSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPYCTDMVTEVRGFTDPQKEEYFRKR
FGEEEQTRIISHIKTSRSLHIMCHIPVFCWITATVLENVLEKVLEAREGGELPKTLTEMY
IHFLVVQAKLKKVKYDGGAETDPHWSPESKKMVESLGKLAFEQLQKGNLIFYELDLRECG
IDVREASVYSGVFTQIFREESRLYQDQVFCFIHLSVQEFLAALHVHQTFIKSGVNLLEEQ
RNTEADLHQSAVDKALQSPNGHLDLFLRFLLGLSLETNQNLLRGLMTSNQRSSQNNQETI
KYIKEKISEDLSAERSINLFHCLNELNDQSLVEEVQESLRSGRLSTDELSPAQWSALVFI
LLSSEEDLEVFDLKKFSASEKALQRLLPVVKASKKVLLSGCHLSEDICPLLSSVLGSQSS
SLTELDLSNNHLQDSGLEQLCPGLESPHCHLESLRLSGCHFSEDICPLLSSVLSSQSSNL
TELDLSNNDLQDSGLEQLCPGLESPHCHLESLRLSGCLISEEGSSSLVSALTSNPSHLRE
LDLSYNHPGESARKLLSRVEDPRWRLDTLRLSGCHLSEDICPLLSSVLSSQSSSLTELDL
SNNDLQDSGLEQLCPGLESPHCHLESLRLSGCLISEEGSSSLVSALTSNPSHLRELDLSY
NHPGESAGKLLSRVEDPRWRLDTLRVEPAGQRWLTPGLRKYSCRLTVDTNTVHNNIKLSD
DNRKMMCVGEDQSYPDHPDRFDLWPQLLCREVLTGRCYWEVQWSGDVCVSVTYTRISRKG
NSDDCGFGGNDHSWMLDCYPGRRYRVRHNNRVTSINSSSPCPDSGRAAVYVDVPAGTLSF
YEVSVSDRLIHLHTFITSFSEPLYAGFGLYWSGSGSSVSLCPV
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggacggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctgaacctgga
cctggacctggatctggacctggaccaggacctggacctggacctgaacctggttcagga
cctgaacaaggacccagctgtgtctccttgaagagcgaccgattaaaagacttgatagtc
ttctttgaaggagaccaacattctgctggaaagaggatccatcagaaaggagactctctg
gaacatgaacccagctgtttgtccttgaagagcgactggtcaagggactggttcattgac
tttaaaggagaccaacgttcttcttcagagagagtggaccagcagatctcagagtccccc
agtggtccgtctgtccagcagcatcagacccagctggactccatctttcaggtgctggag
gacgacattgtcatgtttgtgaaggacgagctgaagaagatccagaaggttctgagtcca
gattacccagaatcctcagagagtctggaggaggatgaagatgaagagcagaagagcatc
agagagacactcgtgaagatcacagtgaagttcttgaggaggaggaagcaggagaagctg
gccgacctcctgcagagcaataccgttgctgccgtttgtcaatccaaactcaaaggtcag
ctgcagaagaagcaccagcatgtgtttgagggaatcattaaagccggaaagaaaacccgt
ctggagcagatctacacggggctctacatcacagagggagggactggagaggtcaatgaa
gaacatgaagtcagacagattgaagcagcttccaggaaaccagacggagcagaaacagcc
atcagacaggaagacatctttaaactcccacctggaagaggaggaccaatcagaacggtg
atgacgaagggagtggccggcatcgggaaaacagtcctaacacagaagttcagtctggac
tgggctgaaggcagaaccaaccaggacatccagttcctgcttccattcaccttcagacag
ctgaatgtgctgagagaggagaagttcagcttggtggaacttgttcatcgattcttcact
gaaaccaaaggaatctgcaactttgaagagttccaggtcgtgttcatctttgacggtctg
gatgagtatcgtcttcctctggacttccacaactctacaatcgtcggtgaccccagaagg
tccacctcagtggatgtgctgctgacaaacctcatcagggggaacctgcttccttctgct
cgtctctggatcaccacacgacctgcagcagccaatcagatccctccttactgtactgac
atggtgacagaagtcagaggtttcactgacccccagaaggaggaatacttcaggaagagg
ttcggagaagaggagcagaccaggatcatctcccacatcaagacatcacggagcctccac
atcatgtgccacatcccagtcttctgctggatcactgctacggtcctggagaacgtcctg
gagaaagtcctggaagccagagagggaggagagctgcccaagaccctgactgagatgtac
atccacttcctggtggtccaggccaaactgaagaaggtcaagtatgacggaggagctgag
acggatccacactggagtccagagagcaagaagatggtggagtctctgggaaaactggct
tttgagcagctgcagaaaggaaacctgatcttctatgaactagacctgagagagtgtggc
atcgatgtcagagaggcttcagtgtactcaggagtgttcacccagatctttagagaggag
agcaggctgtaccaggaccaggtcttctgcttcatccatctgagtgttcaggagtttctg
gctgctcttcatgtccatcagaccttcatcaagtctggagtcaacctgctggaggaacaa
agaaacacagaggccgacctccatcagagtgctgtggacaaggccttacagagtccaaac
ggacacctggacttgttcctgcgcttcctcctgggtctttcactggagaccaatcagaac
ctcctacgaggtctgatgacatcaaaccaaagaagttcacagaacaatcaggaaactatc
aaatacatcaaggagaagatcagtgaggatctgtctgcagagagaagcatcaacctgttc
cactgtctgaatgaactgaacgatcagtctctggtggaggaggtccaagagtccctgagg
tctggacgtctctccacagatgaactgtctcctgctcagtggtcggctctggtcttcatc
ttactgtcatcagaagaagatctggaggtgtttgacctgaagaagttctcagcttcagag
aaggctctacagaggctgctgccggtggtcaaagcctccaagaaagttctactgagtggc
tgtcacctctcagaggacatctgtccacttctgtcctcagttctcggctctcagtcctcc
agtctgacagaactggacctgagcaacaaccacctgcaggattctggactggagcagctg
tgtcctggactggagagtccacactgtcacctggagtctctcagactgagtggctgtcac
ttctcagaggacatctgtccacttctgtcctcagttctcagctctcagtcctccaatctg
acagaactggacctgagcaacaacgatctgcaggattctggactggagcagctgtgtcct
ggactggagagtccacactgtcacctggagtctctcaggctgtcaggctgtctgatctca
gaggaaggaagttcttctctggtctcagctctgacctccaacccctcccacctgagagag
ctggacctgagctacaaccatccaggagagtcagcaaggaagcttctgtctagagtggag
gatccccgctggagactggacactctcagactgagtggctgtcacctctcagaggacatc
tgtccacttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctg
agcaacaacgacctgcaggattctggactggagcagctgtgtcctggactggagagtcca
cactgtcacctggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttct
tctctggtctcagctctgacctccaacccctcccacctgagagagctggacctgagctac
aaccatccaggagagtcagcagggaagcttctgtctagagtggaggatccccgctggaga
ctggacactctcagggtggagcctgctggacaacgatggctgacaccaggtctgaggaag
tattcctgtcgactcaccgtcgacacaaacacagtccacaacaacatcaaactgtctgat
gacaacaggaagatgatgtgtgtgggggaggatcagtcgtatcctgatcatccagacagg
tttgatctctggcctcagctgctgtgtagagaagttctgacgggtcgctgttactgggag
gtccagtggagcggagatgtttgtgtatcagtgacttacacaagaatcagcaggaaagga
aactctgatgactgtgggtttggaggaaacgatcattcctggatgctggactgttatcca
ggtcgtcggtaccgtgtccgtcacaataacagagtaacatccatcaactcctcatctcca
tgtccagactctggcagagcagcagtttacgtggacgttcctgctggaactctgtccttc
tatgaagtctctgtctctgacagactgatccacctccacaccttcatcaccagcttctct
gaacctctctatgctggatttggactctactggtccggttctggttcctcagtgtctctg
tgtccagtttag
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