Cololabis saira (Pacific saury): 133420196
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Entry
133420196 CDS
T09849
Symbol
taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133420196 (taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133420196 (taf6l)
03036 Chromosome and associated proteins [BR:
csai03036
]
133420196 (taf6l)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133420196 (taf6l)
Coactivators
SAGA/TFTC/STAGA complex
133420196 (taf6l)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133420196 (taf6l)
STAGA complex
133420196 (taf6l)
TFTC complex
133420196 (taf6l)
SAGA complex
133420196 (taf6l)
SLIK complex
133420196 (taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
133420196
NCBI-ProteinID:
XP_061565782
LinkDB
All DBs
Position
20:complement(37519545..37535295)
Genome browser
AA seq
640 aa
AA seq
DB search
MVDREERRFAEVSTESVKLVAESAGVELGDDVAGLLAEDVCYRLREAAQTSSQFMRHAKR
RKLTVEDFSRGLRWSNVEAVCGYGNQDALPFCPVKEGEVFFVEDRDINLIELALATNIPK
GCAETMVQVNVAYLDGKGNIEPQGTVPAAVQSLSDELLKFYQQITRAILGEDPHLMKVAL
LELQSNSKIAALLPYFVYVISGVKSVSHDLEQLNRLLHMVKSLVQNPYLYLGSYVRSLVS
SVMYCILEPLAASINPLNDHWTLRDYAALLLSHIFWTHGDLVSGLYHQILLSLQKVLSDP
VRPLCSHYGAVVGLHALGWKAVERVLFPHLPAYWANLQAVLDDYSVSNAQVKADGHKVYG
AILVAVERLLKMKALSESQPAEGSSGVPAGSVGAQSYRVSSPGLSPPPESLTEPALGIAS
HLQAGGAGCAWKEWSPVPLPVMYCELYSFFGDSLAVRFSTGPGFESHAACAPSQLRDTRK
EPLGPVSNTDTTRKMPQLTANLNISPRQDGSPRTDPPPPSLPATGSGSGRSLARCSSVQR
SRSSSSRLGHRSAGLSRDVFPKARFTSPQAGPPAFSFIIGGRQMGRRCQGRRPFQTTFAL
TSSHSAIPSRAYAHKLPVIGRVGKPVRRWAYSHYSLHLPL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtggatcgggaggaacggcgcttcgctgaggtttccacggagtctgttaaactggtt
gcggaaagtgcaggtgtagaacttggagatgacgtagctggtctgctggccgaagacgtc
tgctaccgactccgagaggcggcacagaccagctctcaatttatgcgacatgcgaaaagg
aggaagctgacagtggaggacttcagcagaggtctgcgctggagcaatgtggaggccgtt
tgtggatatggaaaccaggacgccctgcccttctgtccggtgaaagagggagaggttttc
ttcgttgaggaccgggacattaacctgatcgagctggctctggccaccaacattcctaaa
ggctgtgctgagaccatggtccaagtaaacgtggcgtatctggatggtaaagggaacata
gagccccaggggacagttcctgctgcagtccaatctctatcagatgagctgctaaagttc
taccagcagatcacacgggccattctaggagaggacccccaccttatgaaggtagctcta
ctggagctccagtccaactccaagatcgctgcactgctgccatacttcgtttatgtaatc
agtggagtgaagtctgtcagccatgatctggagcagctcaacaggctcctccacatggtg
aagagcttggtccagaacccgtacctgtacctgggctcgtacgtgcgcagcctggtgtcc
agcgtcatgtactgcatcctggagccgctggccgcctccatcaaccccctcaacgaccac
tggaccctccgggactacgctgccctgctgctcagccacatcttctggactcatggtgat
ctggtcagtggtctttaccaccagatcttgctgtctcttcagaaggttctgtctgacccg
gtgagaccactctgctctcattatggagccgtggtcggccttcacgctctggggtggaag
gctgtggagagagttctgtttccacacctccctgcctactgggccaacctgcaggccgtg
ctggacgactactccgtgtccaacgcccaggtcaaagcagacggacacaaggtctacgga
gccatcctggtggcagtagagcgcctcctgaagatgaaagctctgtctgagtcccagcca
gcagaaggttcctccggtgttccagcaggttctgtaggagctcagagttacagggtgagc
tccccgggcctcagcccccccccggagagcctgacggagccggccctggggatcgccagc
cacctgcaggccgggggggccggctgtgcgtggaaggagtggtcccccgtccccctgccc
gtcatgtactgtgagctctactccttcttcggggacagcctggccgtccggttcagcacc
ggcccggggtttgagagccacgctgcctgtgctccgtcacagctcagggacaccaggaag
gagcctctcggccccgtctccaacaccgacaccacccggaaaatgccccaacttacagcc
aacctcaacatcagccccagacaggatggaagtcctcgtacagatccccccccgcccagc
cttccagccacaggatcaggatcaggaaggtcgttagctcgctgctcgtcggtgcagcgc
tccaggtcgtcctcgtcccggctgggccaccggtcagcaggcctgtcccgggacgtcttc
cccaaggcccgcttcacctcccctcaggccgggcccccggccttctccttcatcatcggg
ggccggcagatgggccggcgctgccagggccgccggcccttccagaccacgtttgctctg
acttcctctcactccgccatcccgtcacgcgcctacgcccacaagctgcccgtcatcggg
agggtgggcaaacccgtacgacgctgggcgtattcccattactctctccatctgcctctt
tag
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integrated database retrieval system
