Cololabis saira (Pacific saury): 133420212
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Entry
133420212 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133420212
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133420212
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Tox-ODYAM1
CFAP143
Motif
Other DBs
NCBI-GeneID:
133420212
NCBI-ProteinID:
XP_061565804
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Position
20:complement(8557829..8598874)
Genome browser
AA seq
1184 aa
AA seq
DB search
MDHYEDREEGVPPSKTSLCGEHESWSKAQRNQPGPGSGPGPGPGPGPGPGPGPGPGPGPG
PGPGSGPGPSCVSLKSNQSKDYVITFKGHQHSAVKRVHQKGDSLEHEPSCLSLKSDWLND
RLIFFKGDQQSSERVDQQISEPPSGPSVQQHQTQLDSIFQMLEDNIVMFVKNELKKIQRG
LSPDYPESLEHLLEGEDEEQRSSREALVKITVNFLRRMKQEELAERLQSSTSAKVCKKQL
KSELKKKSQCVFEGIIKAGNPALLEQIYTELYITEGGTGEVNHEHEVRQIEAASRKPNRA
ETTIRPEDIFKLPAGRKGPIRTVMTKGVAGIGKTVLTQKFSLDWAEGKTNQEIQFLLPFT
FRQLNVLREEKFSLVELVHAFFSETRGICSFEEFQVAFIFDGLDESRLPLDFHNSTIVSD
PRRSTSVDVLLTNLIRGNLLPSACLWITTRPAAANQIPPECVSMVTEVRGFTDPQKEEYF
RKRFREEEQTSRIISYIKTSRSLHIMCHIPVFCWITATVLENVLENVLETREGGKLPKTL
TEMYIHFLVVQAKLKKVKYDGGVGTDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDL
RQCGIDVKEASVYSGVFTQIFREESSLYQDQVFCFIHLTVQEFLAALHVHQTFIKSGVNL
LEEQRNTETELYQSAVDKALQSPNGHLDLFLRFLMGLSLETNQTLLRGLLEPKQRSSQNN
QETVEYIKKKISEDLSAEKSINLFHCLNELNAGSLVEEVQQSLRSGLLSTDKLSPAQWSA
LVFILLSSEDLEVFDLKKYSASENVLRRLLPVVKASKKVVLSGCNLSSYICAHLSSVLSS
QSSSLTELDLSHNPLQDLGLERLCPGLESPHCHLESLRLSGCNLSGNICPLLSSVLSSQS
SSLTELDLSNNPLQDSGLMKLCPGLESPHCHLESLRLSDCLISEKGCVSLVLALSSNPSH
LKELDLSCNHPGESAVKLLSAGLKDPRWRLDTLRVEPAGQRWLTRGLRRYSCQLNIDTNT
VQNNIKLSDNNRKMTRVKEDQSYPDHPDRFDYWRQLLCREVLTGRCYWEVQRRGGVHISV
SYRRISRKGTSDDCVFGGNDHSWNLYCSDDGWYCVYHNKRGTPSVSSSSVSDRVAVYVDV
PAGTLSFYSVSSDRLIPLHTFNTTFTEPLYPGFGFDLGSSVSLC
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggatcattatgaggacagggaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagttggagcaaagctcagaggaatcaacctggacctggatctggacctgga
cctggacctggacctggacctggacctggacctggacctggacctggacctggacctgga
cctggacctggatctggacctggacccagctgtgtgtccttgaagagcaaccagtcaaag
gattatgttattaccttcaaaggacaccaacattctgctgtaaagagggtccatcagaaa
ggagactctcttgaacatgaacccagctgtttgtccttgaagagcgactggttaaatgat
agattaatattctttaaaggagaccaacagtcttcagagagagtggaccagcagatctca
gagcctcccagcggtccgtctgtccagcagcatcagacacagctggactccatctttcag
atgctggaggacaacattgtaatgtttgtgaagaacgagctgaagaagatccagaggggt
ctgagtccagattacccagaatccctagagcatctgttggagggtgaggatgaagagcag
aggagcagcagagaggcgttggtgaagatcactgtgaacttcctgaggagaatgaagcag
gaggagctggctgagcgtctgcagagcagtacttctgctaaagtgtgtaaaaagcagctg
aagtctgagctgaagaagaagtcccagtgtgtgtttgaggggatcattaaagcaggaaac
ccagcccttctggagcagatctacacagagctctacatcacagagggagggaccggagag
gtcaaccatgaacatgaagtcagacagattgaagcagcttccaggaaaccaaacagggca
gaaacaaccatcagaccggaagacatctttaaactcccagctggaagaaaaggaccaatc
agaacagtgatgacgaagggagtggccggcatcgggaaaacagtcctaacacagaagttc
agtctggactgggctgaaggcaaaaccaaccaggaaatccagttcctgcttccattcacc
ttcagacagctgaatgtgctgagagaggagaagttcagcttggtggaactagttcatgca
ttcttctctgaaaccagaggaatctgcagctttgaagagttccaggtcgcgttcatcttt
gacggtctggatgagagtcgacttcctctggacttccacaactctacaatcgtcagtgac
cccagaagatccacctcagtggacgtgctgctgacaaacctcatcagggggaacctgctt
ccttctgcttgtctctggatcaccacacgacccgcagcagccaatcagatccctcctgag
tgtgtctccatggtgacagaagtcagagggttcactgaccctcagaaggaggaatacttc
aggaagaggttcagagaagaggagcagaccagcaggatcatctcctacatcaagacatca
cggagcctacacatcatgtgccacattccagtcttctgctggatcactgctacggtcctg
gagaacgtcctggagaacgtcctggaaaccagagagggagggaagctgcccaagaccctg
actgagatgtacatccacttcctggtggtccaggccaaactgaagaaggtcaagtatgat
ggaggagttgggacggatccacactggagtccagagagcaggaagatggtggagtctctg
ggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctatgaaccagacctg
agacagtgtggcatcgatgtcaaagaggcttcagtgtactcaggagtgttcacccagatc
tttagagaggagagcagcctgtaccaggaccaggtcttctgcttcatccacctgactgtt
caggagtttctggctgctcttcatgtccatcagaccttcatcaagtctggagtcaacctg
ctggaggaacaaaggaacacagagactgagctctatcagagtgcagtggacaaggcctta
cagagtcccaacggacacctggacttgttcctccgcttcctcatgggtctttcactggag
accaatcagactctcttacgaggtctgcttgaaccaaaacaaagaagttcacagaacaat
caggaaacagttgaatacatcaagaagaagatcagtgaggatctgtctgcagagaaaagc
atcaacctgttccactgtctgaatgaactgaacgctggttctctggtggaggaggtccaa
cagtccctgaggtctggacttctctccacagataaactgtctcctgctcagtggtcggct
ctggtcttcatcctactgtcatcagaagatctggaggtgtttgacctgaagaaatactca
gcttcagaaaacgttctacggaggctgctgccggtggtcaaagcctccaagaaagttgtg
ttgagtggttgtaacctctcatcgtacatctgtgcacatctatcctcagttctcagctct
cagtcctccagtctgacagaactggacctgagtcacaaccccctgcaggatttaggactg
gagaggctgtgtcctggactggagagtccacactgtcacctggagtctctcaggttgagt
ggttgtaacctctcagggaacatctgtccacttctgtcctcagttctcagctctcagtcc
tccagtctgacagaactggacctgagcaacaaccccctgcaggattcaggactgatgaag
ctgtgtcctggactggagagtccacactgtcacctggagtctctcaggctctcagactgt
ctgatctcagagaaaggctgtgtttctctggtcttagctctgagctccaacccctcccac
ctgaaagagctggacctgagctgcaaccatccaggagagtcagcagtgaagcttttgtct
gctggactgaaggatccccgctggagactggacactctcagggtggagcctgctggacaa
cgatggttgacacgaggtctgaggaggtattcctgtcaactcaacatcgacacaaacaca
gtccagaacaacatcaaactgtctgacaacaacaggaagatgacacgtgtgaaggaggat
cagtcatatcctgatcatccagacaggtttgattactggcgtcagctgctgtgtagagaa
gttctgacgggtcgctgttactgggaggtccagaggagaggaggagttcatatatcagtg
agttacagaagaatcagcaggaaaggaacctctgatgactgtgtgtttggagggaacgat
cattcctggaatctgtactgttctgatgatggttggtactgtgtctatcacaataaaaga
ggaacaccttccgtctcctcttcctcagtctctgacagagtagcagtgtatgtggacgtt
cctgctggaactctgtccttctacagcgtctcctctgacagactgatccccctccacacc
ttcaacaccacattcactgaacctctctatcctgggttcgggttcgatcttggttcttca
gtgtctttgtgttga
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