Cololabis saira (Pacific saury): 133420221
Help
Entry
133420221 CDS
T09849
Symbol
cnga1b
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133420221 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133420221 (cnga1b)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133420221 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
Sec62
CDC45
Piezo_TM1-24
PIP5K
PFF1_TM
Neur_chan_memb
ALMT
NPR3
GmrSD_N
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
133420221
NCBI-ProteinID:
XP_061565820
LinkDB
All DBs
Position
20:complement(7895269..7936099)
Genome browser
AA seq
653 aa
AA seq
DB search
MAKVVPLAPPPNSRIAPPTIALQEMGEEPSGEECEGRNLQRVGPGVLFNVNNNNNNEEED
KQEKKRKKKEKKERKEKKEKEKQEKKERKEQKQKEKEEKQKEKEEKEKEKEKQKQKEEKE
RKAAEEKAREIRVIDPAGNTYYYWLFIITIPVMYNWTLIIARACFEELQTDYLHMWFGLD
LLSDFTYICDMIFRTRTGYLEQGLLVKDRVKLQDRYMASFQFKLDMISMIPTDLFYLIVG
IKYPEIRLNKLFRFNRMMEFFQRTETRTNYPNALRISNLVMYILIIIHWNACLYYSFSKA
IGFGADRFVYPDPKDPEFGRLIRKYAYSMYWSTLTLTTIGETPPPVENSEYIFVVTDFLV
GVLIFATIVGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTN
KKAVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGD
YICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILAIKGSKAGNRRTAN
IRSIGYSDLFCLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLEVAAQGPDPKEVE
EKVDRMALMLDTMQTRYARLLAEHEATHSKVKYRVTRLERRLAPPPPPTSETG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtagtaccgttagccccgccccctaactctaggatagctccgcccaccatt
gctctacaggaaatgggggaggagccaagtggagaagaatgtgaaggcaggaaccttcag
agagtcggacctggagttttgttcaacgtgaacaacaacaacaacaacgaggaggaggac
aagcaggaaaagaagaggaaaaagaaagaaaagaaagagagaaaagagaagaaggagaaa
gagaagcaggagaagaaggagaggaaggagcagaagcagaaggagaaagaggagaagcag
aaggagaaggaagagaaggagaaggagaaggagaagcagaaacagaaggaggagaaagag
aggaaggccgcggaggagaaggcccgggagatcagggtgatcgatccggcgggaaacacc
tactactattggctgttcatcatcactatcccagtcatgtacaactggaccctcatcatc
gccagggcctgcttcgaggagctgcagaccgactacctgcacatgtggttcggcctggac
ttgctctccgacttcacctacatctgtgacatgatcttcagaaccaggaccggctacctg
gagcagggtttgctggtgaaggacagggtgaagctacaggaccgctacatggcgagcttc
cagttcaagctggacatgatctccatgatccccactgatttattctacttaatcgttgga
atcaagtaccctgagatccgcctcaacaagctcttcaggttcaacaggatgatggagttc
ttccagcggacagagaccaggaccaactaccccaacgctctccgcatctccaacctggtc
atgtacatcctcatcatcatccactggaacgcctgcctgtactactccttctccaaggcc
atcggtttcggtgccgacaggttcgtgtatcccgacccgaaggacccggagttcggccgt
ctgatcaggaagtacgcttacagcatgtactggtccacgctgacgctcaccaccatcgga
gagacgcctccgccggtggagaactccgagtacatcttcgtggtgaccgacttcctggtg
ggcgtgctgatctttgccaccatcgtcggtaacgtgggctccatgatcaccaacatgaac
gcagccagagccgatttccaggcccgcatcgacgccatcaagcagtacatgagcttccga
aaggtaacaaaggacttggagaagcgagtcatcaagtggtttgacttcctgtggaccaat
aagaaggcggtggacgagcgggaggtgctgaagtatctgccggacaagctgagggccgag
atcgccatcaacgtgcacctggacaccctgaagaaggtccggatctttgccgattgcgag
gccggcctgctggtggagctggtgctgaagctgcagccgcaggtctacagtcccggtgac
tacatctgcaagaagggcgacatcggcagggagatgtacatcatcaaggaggggaagctg
gccgtggtcgcagacgacggggtcacgcagttcgtggttctcagcgacggcagctacttc
ggagagatcagcatcctggccatcaaaggaagtaaggcggggaaccggaggacggccaac
atccggagcatcggatactccgacctcttctgcctgtccaaggacgacctgatggaggcg
ctgacggagtatccggatgccaaggccctgctggaggagaaggggaggcagatcctgatg
aaggacgggctgctggacctggaggtggcggcacagggcccggaccccaaggaggtagag
gagaaggtggaccgcatggccctgatgctggacaccatgcagacccgctacgcccggctg
ctagcagagcacgaggctacgcacagcaaggtcaagtaccgggtcacacggctggagagg
aggctagcgccgccgccgccgccgacctccgagaccggctag
DBGET
integrated database retrieval system
