Cololabis saira (Pacific saury): 133420303
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Entry
133420303 CDS
T09849
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133420303 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133420303 (slx1b)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133420303 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-HC5HC2H_2
PHD_NSD
zf-HC5HC2H
zf-RING-like
T5orf172
FANCL_C
Motif
Other DBs
NCBI-GeneID:
133420303
NCBI-ProteinID:
XP_061565948
LinkDB
All DBs
Position
20:38145070..38161769
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AA seq
262 aa
AA seq
DB search
MVVEVESFYGVYMLYCINPKFKGRIYIGFTVNPERRIGQHNAGRHRGGAKRTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHSSRRLPHVSRRSRKESSLQFHWRVVSNMLRAEPWSR
LPLTARWLKQEYRMDFQPGLQPPLHIPVSFGSVRAKKKLPLEPAPEEETMSTCFICKGLV
KVSERLLCFHPSCGMSSHLICLARSFLKVEPLQLLPVEGECPSCRRSLLWGSLVRQKHGC
LGDLEEEKMSAAQSHWADELLL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggaggtggagagcttctatggcgtctacatgttgtactgcattaatcctaaa
tttaaaggacggatctatatcggcttcaccgtgaaccccgagcgcaggatcggacaacac
aacgcaggaagacaccgggggggagccaagcggaccagcgggagaggaccgtgggagatg
gtcctcattattcatggctttccctctgacatcgcagccctgaggtttgagtgggcgtgg
cagcatccccactcctccagacggctcccccacgtgtcccggcggtccaggaaagagtcc
agcctgcagttccactggcgcgtggtgtccaacatgctgcgggcggagccctggagccgg
ctgccgctcaccgcccgctggctcaagcaggagtaccggatggacttccagcccggcctg
cagccgcccctgcacatccccgtctccttcggcagcgtcagggccaagaagaagctgccg
ctggagcctgcaccggaggaagagaccatgtccacgtgtttcatctgcaaaggcctagta
aaggtttcagagaggctgctctgtttccatccgtcctgcgggatgagcagtcacctgatc
tgcctggccagatccttcctgaaggtggagccgctgcagctgctgccggtggagggagag
tgtccgtcctgccgccgctctctcctgtgggggagcctggtccggcagaaacacggctgc
ctgggagacctggaggaggagaagatgtctgcagcccagagccactgggcagacgagctg
ctgctgtga
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