Cololabis saira (Pacific saury): 133420335
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Entry
133420335 CDS
T09849
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csai00535
]
133420335 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
133420335 (gpc6a)
Proteoglycans [BR:
csai00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
133420335 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
csai00537
]
Others
133420335 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Put_Phosphatase
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
133420335
NCBI-ProteinID:
XP_061566001
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Position
2:complement(25936561..26100771)
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AA seq
570 aa
AA seq
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MYAMWRLQVALCTVSVLSLSSAGEAKARSCSEVRQAYNAKGFSLLNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLSQQSKLEFENLVEESSRNIRTTFITRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNV
VPACVRALTRMLYCPYCSGMPGLKPCHNYCHNVMRGCLANQADLDSEWNLFTDAMLLVAD
RLQGPFNIEAVIEPIDIKISEAIMTMQDNSMQVSAKVFQECGQPKPSGIGRSARGISDVF
SARFRPYTPEQRPTTAAGTSLDRLRIVWRTMQHSVTDIKERLKESKRFWSKLPDEICSEE
KLTESDEEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDSLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTELIFVGTEAPVIGADRSDERAAAAA
AGKSLSRGPSLLLVMAALTIPLWAMQTQLR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaggtcgccttgtgtactgtgtcggtgctttccctgtcc
tccgctggtgaagccaaagcgcggagctgtagcgaggttaggcaggcttataacgcgaag
ggattcagcctcctcaatgttccccatcaggaaatatcaggtgagcacctccgtgtctgt
cctcagggatatacctgctgcacatctgagatggaggacaaactcagccagcagagcaaa
ctggagtttgagaatttggtcgaagagagcagccgtaatataagaacgacttttatcacc
aggcataaaaaatttgatgagtttttcttggagcttctggacaactctgagaaatcgctc
aacagcatgttcacaaggacgtacgggaagctgtacatgcagaactctgaggtgttccag
gacctgttcactgagctaaagcgctactacacaggaggcaatgtcaacctggaggagatg
ttgaatgacttctggtccaggctgctggagcgcatgttccagttgcttaactcccagtac
cacttcacagacgactacctggagtgcgtcagtaaatacacagatcagctaaagcccttt
ggagacgtgccccggaagctgaaggcacaggtcaccagggccttcattgccgcacgaacg
tttgtgcaaggactaatggttggccgggaggtggccaacagggttgcaaaggtgaatgta
gttccagcatgtgtcagagccttgaccaggatgctgtactgtccgtactgcagcggcatg
cctgggctgaaaccctgtcacaactactgtcacaacgttatgaggggctgtcttgcaaac
caggcagaccttgattctgaatggaaccttttcactgatgccatgttgctggtagctgac
agactgcaggggcccttcaacattgaggctgttatcgagccaattgacatcaagatctct
gaggccatcatgaccatgcaggacaacagcatgcaagtatcagcaaaggtttttcaagag
tgtggccaaccaaagccgtcaggaataggcaggtctgcacggggaatctctgatgtgttc
agtgctcgcttcagaccgtacacgcccgaacagagaccaaccacggcagctggaacaagc
ctcgatagactgaggattgtctggaggacaatgcaacacagtgtgactgacatcaaagag
cgattaaaggagtccaaaaggttctggtccaaattgccagatgaaatctgttctgaagaa
aagctcacagagtctgatgaggagcagtgctggaacagccacacgaagggcagatatttc
cctgaagtggtgaaagagggtttaaccaaccaggtaaacaacccagaggttgacgtggac
atcaccagacctgactccctcattcggcaacagatcatggctctgcgcgtcatgaccaac
aagctgaagaatgcctacaatggaaatgacatctacttccaggactccagtgacgagggc
agcagctctggcagcggcagcggctgctctgacggctgcaccacagagttaatttttgtt
ggaacagaagctcctgtgattggagccgacagaagcgatgaacgcgctgctgctgcagct
gcaggcaagtcactttcccgcggaccctccctactgctggtgatggctgccctcacaatc
ccactttgggcaatgcagactcagttaagataa
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