Cololabis saira (Pacific saury): 133420375
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Entry
133420375 CDS
T09849
Symbol
cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133420375 (cdh16)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133420375 (cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Big_9
He_PIG
InlK_D3
Motif
Other DBs
NCBI-GeneID:
133420375
NCBI-ProteinID:
XP_061566051
LinkDB
All DBs
Position
2:26479936..26515537
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AA seq
832 aa
AA seq
DB search
MADRRATPMLIITLVLAIPHTFVLCSGANVKIGVPENYDGIFPWYLSKLPNLPSNYTDMV
LSGDDEGIFGIDGQFLYAIKPLDREKQPSYSLQVSYRSSGVLQNIRTSVPRQSFTVEVCV
IDKNDNVPTFLEESMRGSVQLGLLKGIAFMQVEALDRDDRNTPHAELRFSLMEQTPRIPS
SQMFFIDSITGEVSLTDEGASALDPEMCGRYKLLVMVKDMAGKTNAFFTTGIVTVEVTGN
TWASPDPVRLQENLPGPYPIPISQVKWSGSQAEYSLEGEFPEMLFTISREGVIYLNAPLD
RETQDQFQISIVVERPDGREIAKPVELRVMVGDANDNRPTFPQAQYHTVVKELAPRGTEI
LTVQAADNDDPKTDNVRIFYRLFGQIPESPRALFRVDRDSGVISVQADSMEGTAPQYTLT
ITAEDAKGLNSSCTVVVTVQDENNNPPVFSQHEYGPFHVPEDASVGTTVASLLARDADVR
GGDSWQVDYRLESGNEEEVFTLVMDKQTNEVSLVLSKVLDFERESEYILVLGAQNPVALV
RGRYGPASTATVSIYIDDVNEGPILSQSHYEVTVREGEEPGRVIATIRGYDPDSHPIRYS
LQGDTKKYFSIGKYSGELKTVQALDREENSTYTMEVIAVDGRNSSLSASTLVTVHILDVN
DNSPVLVGDYSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLRSDATVRRNWKLTPI
NDTHTNLSLNIPYLAPEVYTVPFTISDSSSPPRSTFINLPVTVCPCNIRGNCKIAAKPLQ
GMPTIQSAVGILFGTFAVIGTILIVIFVRLSYQNPKEPSKTNQERVPLKISI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaagagctacaccaatgctgattataactcttgtattggcaatacctcac
acttttgtgctgtgctctggggcaaatgttaaaattggtgttcctgaaaactacgatggc
attttcccatggtacctatctaagcttcctaacctaccaagtaattacactgacatggtg
ttatcaggagatgatgaggggatatttggaatcgatggtcagtttctgtacgctataaaa
ccactggaccgagagaaacaaccatcttactctttgcaggtgtcttacagatcatcaggt
gtccttcaaaacatccgaacttcagtgcctcgccagagctttacagttgaagtatgcgtc
attgacaagaacgacaacgtgcctactttcctagaggagagcatgagaggcagcgtgcag
ctggggcttctaaaagggatcgcgttcatgcaagtggaggcgctggatcgggacgaccgt
aacactcctcacgctgagctgcgcttcagcctgatggagcagacgccaaggattccctcc
agccagatgttcttcatcgactccatcaccggagaggtttccctcactgacgaaggagcc
tctgctctggacccagagatgtgtggccgttacaagctcttagtgatggtgaaggacatg
gccgggaagacaaatgctttcttcaccactggcattgtcactgttgaggtgactggaaac
acgtgggcgtcaccagaccctgtgagacttcaggagaatctcccaggcccttatcccatt
cccatatcacaggtgaaatggagtggaagccaggcagagtacagtctggagggggagttt
ccagagatgctcttcacaatcagcagagaaggagtcatttatctcaacgctcctctagac
agagagacacaagaccagtttcaaatcagtattgtggttgagcgtccagatggcagagag
atcgccaagcctgtggagttgagggtgatggtgggggacgccaatgacaacagacccact
tttccacaggcacagtaccacactgtggtcaaggaactggctcctcggggaacagaaatc
ctgactgtgcaggcagccgataatgatgatcccaagacagataatgtccggatattctac
cgtttattcgggcaaatcccagagagtcctcgtgcacttttcagagtggaccgggactca
ggcgtcatctctgtccaagcagacagcatggagggcacagcgccacagtacaccctgacc
atcactgctgaggatgccaaaggtctaaacagttcgtgcacggtggttgtgacggtgcag
gatgaaaacaacaacccaccggtcttctctcaacatgagtatggaccctttcatgtgcca
gaagatgcctcggtaggcaccacagtggcatctctgctggcgagggatgcagatgttcgt
ggtggagacagctggcaggtggactaccgtttagagtcggggaacgaggaggaggtcttt
acgttagtgatggacaagcagaccaatgaggtctcacttgtgctctcgaaggtgttggac
tttgagcgtgaaagtgagtacatactggttctgggtgcacagaatccagtcgctttagtc
cgtggtcgatatggacctgcttccacagcaacagtctccatttatattgatgatgtgaat
gagggccctatcctgtctcaaagccattatgaggtgaccgtcagagaaggggaggaacca
ggccgggtcattgccaccatccgaggttacgacccagattctcacccgataagatattcc
cttcaaggggataccaagaaatacttctcaatagggaaatattctggtgaactaaagacg
gtgcaggccttggacagagaagagaacagcacttacaccatggaggtcattgcagtggat
gggcgaaactcttctttatctgcatccaccctggtaactgtccatatcctggatgtaaat
gataatagtccggtgctggttggagactattcctggaagtacctgtgtacccctcggtgg
gaggaccaagctctggtacttgcttcacgcgacagcgatggaccacagcatggagggcga
ctcaatttctctctccgcagtgatgccactgttcgacgtaactggaagctgacacctatt
aatgacacacacactaatctgtcactgaacatcccatacctggccccagaggtctacact
gtgcccttcaccatctctgacagcagctctcctcccaggagcaccttcataaacttgcca
gtgacagtgtgtccgtgcaacatcagagggaactgcaaaatcgctgctaagcccttgcag
ggcatgccaactattcagtctgctgtggggattctttttggcacctttgcagtcatagga
accatcctcattgtgatatttgtgaggctttcctaccagaaccccaaagagccaagcaaa
actaatcaggaaagagttcccttgaagatttcaatctga
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