Cololabis saira (Pacific saury): 133420481
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Entry
133420481 CDS
T09849
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133420481 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133420481 (poln)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133420481 (poln)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
133420481 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
133420481
NCBI-ProteinID:
XP_061566157
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All DBs
Position
20:complement(20473320..20542908)
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AA seq
1364 aa
AA seq
DB search
MEQLSDSLYAGPLSLAAQTVLAALRGQNLHEARCNQNFSKHQQMERSNHSQRDLGALSRW
NQVEKKDRDTYWPQVYSLSTHDHNSSREGQSSQTSASYQYSQKPDSSLSSQASPRSSTRW
DFSLQRQTSQTVTYYQHSQSYPNGKCSEPPAPPSSQALSVSRHEVPEAEVSLSQKDKYSP
SLQKAHRFAEHHAVLCKKMTRASFNHVNVLNEGDPDEMSFSTTEQPNSHAVPSYSTSSCP
EIYKETDKPSVTQNEESGTYIIAASEIEDSAASGNRLKQHLSDPDEDTSTGTDEGDRLYH
QSMSETIKTKQGHVSPSGFVTKDMGLTGSEIIERSHTEEPLVQMEHLHFSLGDNSDHNLQ
KISLMAVAVEVETENKTKACINRNTDNKTETGQLHSSDIQLRRRPCETEMYRGDTELPGT
DAEAGQRREDREVLVVPTLNGEEMSKSGVLDGKQSLTPSLSQGCGTGQSAFRAPCRLGNQ
LHHDTVKSTNGISRRSKSSIVAIPANAASRQNVSPQDLTSSAAEEKLENKNQPTFQRQSH
HLRTPSFLLKRKSDVFQRQHAKPPPKISRPKLHPKWEPPRPLQKRDMEGGKSELKTDGLT
VSTLEYPALVQESKTKISLCETGTIFKLHKEPLKQLQQTEDSNMEEQCSETATNACRPTP
FSKTRKRRKCSSDAATNWPESLHEGISTSELQSRSKTSSQPLALTSDARVKDSVKLNLEE
RMQMLEKAVQSKVLVLTMVFADGTTQLNQEQKLGSPVCGLLIMMMSDLCCSSPEDSLGPN
DSLVYLKLEHIPPWAQQQKHHTQDLFTRDMFLRVLSRSELVVCYKAKDVLQTTLQFYRQD
LSWKQVTGCQIHDPQVSGWLLDPADPSACYDDLLYKHCKRQPFTTHATGAQKVSHIISDL
CWLYRLNMNLCSKLKSQGLWHLYSDMELNMIPVLAAMETHRIHVDKDALRRTSDLLGAKM
KQLEQEAHQAAGQIFLVTSSTQLRTVLFEKLRLHERCENKKLPKTVNKQQSTSEAALHQL
QDLHPLPKIILEYRQVHKIKSTFVDGILSCMKSKNYISSTWHQTSAVTGRISAKHPNFQA
LPRQPLQIRKKQYIQGKDEEVVTVHPRTMFIPEDGWTFVAADFCQVELRLLAHFSSDPEL
LHIFSNPQADVFTMLATRWKGVSENEVTSEDREHAKRIVYSVVYGAGRERLSGILGVSAE
QASRFQDTFLQTYRAIQTFIQRTIQQSHKRGYVLSVMGRRRNLPNINSTDWGVRMQSERQ
AVNFVVQGSAADLCKTAMIRIFNLVSSSSFLSARLLAQLHDELLYEVEDSQVEQFAGLVR
STMESLQHIEHLGLHLKVPLKVAISSGKSWGSMSELNIPPTSPP
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atggagcagttaagtgacagcttgtacgctggccccttgtccctggcggcccaaacggtc
ctggctgctctgcgaggccagaatcttcatgaggcgagatgcaaccaaaacttcagtaaa
caccagcaaatggagaggagtaatcacagccagagggatttgggggctctgagcagatgg
aatcaggtggaaaagaaagacagagacacatattggccccaggtgtactctctttccact
catgaccataattcctccagagaagggcagagctctcagacctcagcctcctatcagtac
tcacagaaaccggatagctcgctgtcatcccaggcctccccccgttcctccacccgctgg
gacttctcactccaaaggcagacatctcaaactgtaacctattatcagcactcgcagtca
tatcccaacggaaagtgctctgaacctcccgctcccccgtctagccaggctctgtcagtc
tcccggcacgaggttcctgaggcagaagtgtccttgagtcaaaaagacaaatactctcct
tccctccagaaagcacacagatttgctgaacatcacgccgtactctgcaaaaaaatgaca
agggcaagtttcaaccatgtcaatgtcctaaatgagggagaccctgacgagatgtccttc
tccacgacagaacagcctaattctcatgctgtgccttcttactcgacatcatcctgccct
gaaatatataaagagacagataaaccatcagtcacgcaaaatgaagaaagcggtacctac
attatagctgccagtgaaatagaagacagtgcagcttcaggtaatcgattaaagcagcat
ctgtctgaccctgatgaagacaccagtactgggacagatgaaggagacagactttatcat
cagtcaatgtctgaaacaatcaaaacaaaacagggacatgtgtctcccagcgggtttgta
acaaaggacatgggtctcactgggtctgaaatcatagagaggagccacacggaagaacca
ctggttcagatggaacatttgcatttttccttgggggataacagtgatcataacctgcag
aaaatcagcttaatggcagtcgcggtggaagttgaaacggagaacaaaacaaaggcgtgt
atcaatagaaacaccgataataagacggagacaggacagcttcattcttctgacatccaa
ctaagaaggaggccgtgtgagacagagatgtacagaggagacaccgagttacctggaacg
gacgcagaggcaggacagaggagagaggacagagaggtgttggttgtaccaactctgaac
ggtgaagaaatgagtaaatctggtgttttagatggaaagcagagtctcacaccatcgttg
tcgcagggttgtgggacaggacagtcagcgtttagagctccatgtcgccttggtaaccag
ctgcaccatgacactgtaaagagcactaatggaatcagcagaaggagtaaatcaagcatc
gtagcgatcccagccaatgccgcttctagacaaaatgtctctccacaagacttgacctct
tctgctgcagaggaaaaactagaaaataaaaaccaacctactttccaaagacaatcacat
catctccgtaccccatctttcctactaaaaaggaagagtgatgtatttcagcgccaacat
gcaaaacctcctcccaaaatttccagacccaaacttcatccaaaatgggagccacctcgt
cctttacaaaagagggacatggaaggaggaaagagcgagttgaagacggatggtctcaca
gtctccacgctggaatatccagctttagtccaagaatcaaaaactaaaatcagtctctgt
gaaacaggaacaatattcaagctgcataaagagcccctgaagcaactccaacaaaccgag
gacagcaacatggaagaacagtgtagtgaaacagcaaccaacgcctgcaggccgaccccg
ttttccaaaacacgcaagcggagaaaatgttcaagtgacgctgccacaaactggcccgaa
agtttgcatgaaggaattagcactagcgagctgcagagtcgatccaaaacgagcagccag
cctttagccctgacatccgatgcaagagtaaaggattctgtaaagctaaacctagaagag
aggatgcagatgcttgagaaagctgtgcagtccaaggtgctggtgctaactatggtgttt
gcagatggaaccactcagttaaaccaagaacagaagctgggttcaccggtgtgtggcctc
cttataatgatgatgagcgatctttgctgcagctcacctgaggactctctcgggccaaac
gacagtttggtctacttaaaactggagcacatacctccatgggcacaacagcaaaagcat
cacacccaggatctctttactagagatatgtttctgcgagtgctctcaagatctgaactg
gtcgtgtgctataaggccaaggatgtgcttcaaacaactctgcagttttacagacaagac
cttagctggaaacaagtgactggttgtcagatccatgacccgcaggtgtccgggtggctg
ctggatcctgcagatccctctgcgtgctacgacgacctgctatataaacactgcaaaaga
cagccctttacaacccatgccacgggtgcccagaaggtttctcatatcatctcagatctc
tgttggctctacaggcttaatatgaacctgtgctctaaactaaagagccagggcttatgg
catctctactcagacatggagctgaatatgatcccagttctggcagccatggagacccac
cgcatccatgtggataaagatgctctaagaagaacttcagaccttcttggggcaaaaatg
aaacagctagagcaggaggcccatcaagcagccgggcaaatattcctggtgaccagcagc
actcagctacgaacagtcctgtttgagaagctgcggctccatgagcgttgtgagaacaag
aagcttcccaagactgtcaacaagcaacaatcaacatctgaggcggcattgcaccagctt
caggacctgcaccctctgccaaagatcattcttgagtacagacaggttcacaaaatcaag
tctacttttgttgatgggattctttcatgcatgaagagcaagaactacatttcctctaca
tggcaccagacaagtgctgtgactgggagaatctcagcaaaacacccaaacttccaggcc
ctgccacggcagccccttcaaatcagaaagaagcagtacatccaaggaaaggatgaagag
gtcgtgactgttcatcccaggaccatgttcattccagaagacggttggaccttcgttgct
gcagacttctgccaggtggagctgcgtctgctggctcacttctcctctgaccctgagctg
ctccacatcttctccaacccccaggctgacgtctttacgatgctggccactcggtggaag
ggggtgagcgagaatgaagtgacctctgaggacagggagcatgccaaacgcattgtatac
tcagttgtttatggagcaggtcgtgaacgtctgtcagggatcttgggggtgagtgcagag
caggcaagccgattccaggacaccttcctccagacctacagagccatccagaccttcatc
cagagaaccatccagcagagccacaaacgaggctatgtgctttctgtcatgggtcgtcgc
cgaaacctccccaacatcaactccacagactggggcgtccgaatgcagtctgagaggcag
gccgtcaactttgttgtgcagggttcagcggctgatctctgtaagacggccatgatcaga
atcttcaacctggtctcctcctccagctttctctctgccaggcttcttgctcagctccat
gatgagcttctgtatgaagtggaggactcccaggtggaacagtttgcaggtctggtgaga
agcaccatggagtctctgcagcacatcgagcatttaggactccatcttaaagtccccctg
aaggtggcaatctccagtggcaagtcttggggatccatgtctgagcttaacatccctccc
acatctcctccttaa
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integrated database retrieval system