Cololabis saira (Pacific saury): 133420535
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Entry
133420535 CDS
T09849
Name
(RefSeq) interferon-induced very large GTPase 1-like
Organism
csai
Cololabis saira (Pacific saury)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
URGCP_GTPase
URGCP
GVIN1_C
GVIN1
URGCP_N
RnaseA
RHD3_GTPase
Dynamin_N
MMR_HSR1
AAA_16
Motif
Other DBs
NCBI-GeneID:
133420535
NCBI-ProteinID:
XP_061566213
LinkDB
All DBs
Position
20:38690429..38718688
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AA seq
1676 aa
AA seq
DB search
MKLQMVCLLLVLLGSEVLSVDQDYDDDDNKDYKTQHKWFIEQHIKPGMRPDRCTEEMKRI
RGIKGRYCKKLNTFILAQAKPIDRLCKGKGDEETIKIFKSVVDCDRIGTRTRPPCAYKET
DLESLLEDLGLTPYCREKLTLSKILEIDEKTITDVPVKSKSDLPWYFIKKLMMVNVTAGN
MKCTSAYESTYDDSLGTELDLRDLLDSPNTDDTLNPLDIITALFLCSDAFVQQEMALKFS
MCQFAVPLLLPSCDTEQCTLMLWAMRDIVKKYRPPALSQSKGFIEERIVDSQVPMISFVR
LGNCSLSKSEILNKLLSNSQQYHNTFVHHNMEGGDSPKRISNGLTEITWYLPCGNTDIDL
FNQPVAVANLHGDIASFETQYSFLCQTSAAVFVFFDHLESECKILTNQNNKAQIFLVGNS
ESKNFSLDALKSVAIKLGLMKNNIIIKRKEKNDADFIKRLRKTVSDVVENPQMKMPIANM
ADIAHELGILVDEDSPECQAGKKNADAITEEIQNLLQYKDEQLPLQGQIWKELTHLEKEE
FRLKKVGSKNVEMYKSDLEQQKEELRKKQSSFNLSPAMTCFINAISRPGIERCYFVKWMR
LNLDNVSRLKLSALRELYKEKCKDSANKEEAKEIDGQLSNSSLGTEHFFREMGQIYEASL
SLPQTHPSRQQLQHLPKLCAQLLLDGFPLELVDGDASNIPLRWVSDVLIQLNHLVSPKNK
IRVVTVLGVQSTGKSTLLNTMFGVQFAVSSGRCTRGAFMLLITLNEDIKRELGCDFMVII
DTEGLKSPELAQLDNSCEHDNELATLVVGLSDITIINIAMENSTEMKDILQIVVHAFLRM
KEVGKKPKCQFVHQNVPDVSAHEKNLRDRKLLLEQLNEMTQAAAKMEKREENKSFTDVME
YSPDTGNCYVPGLWNGNPPMAPVNVGYSQTLYELKKNIIQQLRECVSSANDVLEFKEWMT
SLWNAVKHENFIFSFKNSLVADAYMKLCTEFNRWEWEFKKSMYSWISNAETKILNFGTVA
AKSQISDMEEFLTHLKHEATTELSNWEKKLLDNLEEYFKQTDGHVHLVEGHEEEFKNSAK
NLRRELENSVVNHLTAAADIKRGLKEVDKIKENHTKEIEKAVSELITQCRKKKVQMKDRK
LEKEFDKMWHETLKKMSYSELKHTDVFTDVSHYLRENVSRKGSHACELLSGQSLEKCGLA
AFKYKPERLPGKIEHKVRGWLSLQDLVKARQKVADNIIAACQNSVTDKTKRKTNYHNTNI
QEILRIIDEMLNKADVDTDIEFEVPLKQHICADAARNFQRMQEDFTQANDPKILLDKNKE
KFCADFKDVFHKRDQCHKKAEEFTEQCLKPAVEDFVYRSLGPNITEEMMRSKVFSTRTSF
QGSVLMDLLSKEDFNSYLSCICNYEDYVKTWILEQIKEHFSDASKTSGYEEEHLKSSIKN
IKDAMEKAKSGKSADLKTFVERICKELGDKLVISQDALGAFMILNNADREQFTKSLIASV
EKMEKTLKKKFKCTTFEIKLEHLRVNPQTELFTRVVGCGKQCPFCQVPCEAGKDRHKDHF
ASLHRPQGLAKYTSASSEKLATNICTSLVISDNRFCCHATDDEYHPYKSYREVFPDWHIP
PDGSLESSDFWKYVMNKYNEKFAESYKAEPADIPETWKKITKQQAETSLKNSFNIR
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgcagatggtttgtttgctgctggtgctgctcggttctgaggtgctctcggtc
gaccaagattacgacgacgacgacaacaaggactacaaaacgcaacataaatggttcata
gagcaacacatcaaaccagggatgaggcctgatcgatgtactgaagagatgaagagaatc
agggggatcaagggacgatattgtaaaaaacttaatacttttattttggcacaagctaaa
ccaattgatagactgtgcaaaggaaagggggatgaagaaacgatcaaaatcttcaaatct
gttgtcgactgtgatcgcattggcactcgcactcgccctccttgcgcttacaaggagacc
gacctggagagcctgctggaggatctggggttgacgccgtactgcagagagaaactaaca
ctcagcaagatcctggagattgatgagaagaccatcactgatgttcctgtcaagagtaaa
tcagatctcccatggtattttataaagaaactgatgatggttaatgtaacagctggaaat
atgaagtgcacatcagcttatgagtcaacgtatgatgattcattagggactgagttagat
ttgcgtgatctacttgacagtccaaacacagacgacacactaaaccctctcgacataatc
actgctctctttctgtgttcagatgcttttgtacaacaagaaatggcactaaaattttca
atgtgtcaattcgctgtgcctctgctgcttcccagctgtgatacagaacagtgtacgctc
atgctgtgggccatgagagacattgtcaagaagtacagacctccagctctttcacaatcc
aagggtttcattgaagagagaatagttgattctcaagttccaatgatctcttttgtgaga
ctgggtaactgctccttgtcaaagtcagagatcctcaataagcttctcagcaattctcag
cagtaccacaacacctttgttcaccacaacatggagggtggtgacagtccaaaaagaata
tccaacggactgacagaaatcacctggtaccttccttgtgggaacacagacatcgacctt
ttcaatcaaccagtggctgttgctaatcttcacggggacattgcttcatttgaaacacaa
tactcctttctgtgtcagacatctgcagcagtttttgtgttctttgaccatttggagtct
gagtgcaaaattcttacgaaccagaacaataaagcgcaaatcttcttggtgggaaacagt
gagagcaagaacttcagcttagatgctctaaaaagtgtagctatcaaattgggcttgatg
aaaaacaacattattattaagagaaaagagaaaaatgatgcagattttatcaaacggctg
agaaaaacagtcagtgatgtagttgagaacccacagatgaagatgccaatagcaaatatg
gccgacattgctcatgaactgggaatcctggttgatgaagactctccagagtgtcaggct
ggaaagaaaaacgcagatgccatcactgaagaaattcaaaacctccttcagtacaaagat
gaacaacttcctctgcaaggccaaatatggaaggaactgactcacttagaaaaagaggaa
tttcgcctaaaaaaagttggatctaagaacgtagaaatgtacaaaagtgaccttgagcag
cagaaagaggaactccggaaaaagcagagctcctttaacctgtccccagcaatgacatgc
ttcatcaatgcaatatccagaccaggaatagaaagatgttatttcgtgaaatggatgcga
ttgaaccttgataacgtctctcgtttaaaactctccgcactaagagagctgtacaaagaa
aagtgcaaagattctgcaaacaaagaggaggcgaaagaaattgatggacaactttccaac
agctctctggggactgaacatttcttccgtgaaatgggtcagatctatgaagcttccctc
tcacttccacaaacacacccatcacgtcaacaattgcaacatctgcccaaactctgtgca
cagttgttgcttgatgggtttcctcttgaacttgttgatggagatgcatccaacatacct
ctgagatgggtgagtgacgttctcattcagctgaatcacttagtgtctccaaagaacaaa
atacgggtagttacagttcttggagttcagagcactggaaagtccactctcctcaacacc
atgtttggagtgcagtttgcagtcagcagtggtcgatgtactcgcggagccttcatgctg
ctcatcacactcaatgaagacatcaaaagagaacttggctgtgacttcatggtgatcatt
gacaccgagggtttaaagtcaccagaacttgctcagctggacaacagctgtgagcatgac
aatgagcttgcaacgcttgtggtggggctgagtgatatcaccattatcaatattgcaatg
gagaattcaactgaaatgaaggacattctgcaaatagtggttcatgctttcctcaggatg
aaggaggtgggcaaaaaaccaaaatgtcagtttgttcatcaaaatgttcctgatgtttct
gctcatgagaagaacctacgagacaggaaactgctcctggagcagttaaatgagatgacc
caagcagccgccaaaatggaaaagagagaggagaacaaaagcttcactgatgtgatggag
tacagtccagacacggggaactgctacgttcctggactctggaatggaaacccaccaatg
gcaccagtcaatgtgggatacagccagactttatacgaactcaagaagaacatcatccaa
caactgagagagtgtgtgtcatctgctaatgatgtattggagtttaaagagtggatgacc
agtctgtggaatgctgtgaagcacgaaaacttcatcttcagcttcaaaaacagccttgta
gctgacgcatacatgaagctctgcacagagttcaacagatgggagtgggagttcaagaaa
tcaatgtacagctggattagcaatgcagaaacaaagattttgaattttggtacagtcgct
gcaaagtctcaaatatctgatatggaagaattcctcactcacttaaaacatgaagcgacc
acagagctgtcaaattgggagaagaagctccttgacaatctggaagaatacttcaagcaa
acagatggacatgtccatttggttgaaggacacgaagaggaatttaaaaacagtgcaaag
aaccttcgtagagaattggaaaattctgtcgtaaatcatctcacagcagcagctgatatc
aaacggggactgaaagaagtcgacaaaatcaaggagaatcatacaaaagaaatagaaaag
gcagtgagtgaattaattactcagtgtcgaaagaaaaaggtccaaatgaaagacagaaag
ttagaaaaagagtttgataagatgtggcatgaaacactgaagaagatgtcttactctgaa
ctaaaacacacagatgttttcacagatgtgagccactatctgagagaaaatgtttcacgc
aaagggagtcatgcttgcgaactcctgagtggacaaagccttgaaaagtgtgggttggca
gcgttcaaatacaaacctgaaagattgcctggaaaaatagaacacaaagtcaggggttgg
ttaagtcttcaagatctcgtgaaagccagacaaaaagtggctgacaacatcatagctgct
tgccaaaactctgtaacagacaaaacaaaaagaaaaaccaactaccacaacactaacatc
caggagatccttcgcatcattgatgaaatgttgaacaaggctgatgttgacacagatatt
gagtttgaagttcctctgaagcagcacatctgtgcagatgcagccagaaactttcagaga
atgcaagaagacttcacgcaagcaaatgaccccaagatccttctggataaaaacaaggaa
aagttctgtgcagatttcaaagatgttttccacaaacgagaccagtgccacaagaaggct
gaagagttcacagaacaatgtctgaaacctgctgttgaagactttgtctaccgttctctg
ggtcccaatatcactgaagaaatgatgagaagtaaagtgttcagcacacgaacctccttc
cagggttcagttcttatggatttgctgtcaaaggaagacttcaacagctatctaagctgc
atttgcaattatgaggattatgtaaaaacatggatacttgaacaaataaaggagcacttc
tcagatgcgtctaaaacatctgggtatgaggaagaacacctcaagtcgagcatcaaaaat
ataaaggacgccatggaaaaggccaaatcagggaagagtgctgacctgaagacatttgtt
gaacgcatctgcaaagaacttggtgataaactggtcatttcccaggatgctcttggtgcc
ttcatgatcctgaacaacgctgaccgggagcagtttactaagtcactaattgcatccgtg
gagaagatggaaaaaactcttaagaagaagtttaaatgcacaacctttgagataaaacta
gaacatctccgtgtgaatcctcagactgagcttttcaccagagtggtcggttgtgggaaa
cagtgtccgttctgtcaagttccctgtgaagcaggaaaagacagacataaagatcacttt
gcttccctgcatcgaccacaaggtctggctaaatacacgtctgccagttcagaaaaactt
gcaactaacatttgcacatctcttgtgatcagtgacaaccgcttttgctgccacgccacc
gacgatgaatatcatccttacaagtcttacagggaagttttcccagactggcacatccct
cctgatgggagtcttgagtcgtcagacttctggaaatatgtgatgaacaagtacaacgag
aagtttgctgaatcatataaggcagagccagctgacattcctgaaacttggaagaaaatt
acaaaacaacaggcagaaacaagtctaaaaaactcatttaacatccgctga
DBGET
integrated database retrieval system
