Cololabis saira (Pacific saury): 133420618
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Entry
133420618 CDS
T09849
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai02010
ABC transporters
csai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133420618
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133420618
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133420618
Transporters [BR:
csai02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
133420618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
ABC2_membrane_2
MukB
Motif
Other DBs
NCBI-GeneID:
133420618
NCBI-ProteinID:
XP_061566340
LinkDB
All DBs
Position
20:30734551..31012878
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AA seq
2250 aa
AA seq
DB search
MGLLAQFTLLLWKNFTLRKRQKVRLVVEVLWPLFLFFILVWVRSTNKPTYKGQCHYPNKA
LPSAGVLPWLQGMMCNIDNPCLNYPTPGETPGQVNNFNNSILAGILVELQTTLVNRSILS
RAQSLADDVDQWTSVLSGTNPGFNNLNGQPVILRNILRENEKFSAYLTEDLSVPPTVVKS
LMNAEVQFSPVMGIQSPGNLRSTLCEGTELDEYIQFSSQAERAAFQNVSCSLTPQQLINT
QQVLLQNLDARKVFSELPAALDLNATDTLALIRKTSLDALPIIEEMNRLQNSVVFKAAGS
LDFQEDMFGSVNMLLCGKQASFNSTNMTLSLPSPRQMANNESISIMGNSSDAFCQTLVET
LEGTPGLRYIWSTFKPLLQGKVLYAPDTPAARLLVKEANSTFNSLAMLKELADSWGELGP
RVWDFFQNSPQVNAIRALLANPVFAATVNQRLDGTGWTAALLANFLYNGPPEDRPPGMPP
NDWRDVYNATTEILKLLSKFLGCLDLNKFEAAPTEGHLVNQALEHLKNDTFWAAIVFNDL
ESNSSKIPPYVKYKIRMDIDDVELTNKLKSRSWSPGARDNPFNDLRYILGGFTYLQDMMD
HAIIRLHTLKTQPLGVFVQQMPYPCYVDDAFIQSIGSILPMFLVLAFMYSVCMTIKGLVW
EKELRLKEVLRAVGIQNGALWSARFIENIVLLTVPCVLISVMVKYGKVLQYSDPSVIFVF
LLVFCLTTISQCFLISVFFSKANLAAACGGLIYFLLYLPHVLCYAWRDVMGFGTKVAVSL
LSCVAFGFGCENFSKYEEQGIGIQWHNIGKSPEEGEPYTFIVSIVIMLFDAAFYWVLTWY
IENVFPGQYGIPKPWYFPFTSAYWCGREPATEENPDLLKDSSAQNEYLEKPPPNMKAGVS
IRNLVKIYKTGKKLAVDGLSVDFYESQITSFLGHNGAGKTTTMSILTGLFPPSSGTAFIN
GYDIRTDMDHIRKYLGMCPQHNVLFDELTVEEHIYFYARLKGCSRSEVASQMDQMIKDVG
LPHKRKDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQG
RTIILSTHHMDEADILGDRIAIISHGKMRCCGSSLFLKKCFGSGYYLTLVRDGTKKMMAQ
RNGMIRSQAKDKQPETGRPSRSGADDGIASKTCDSSDTTDLNSLTELVECHVPEAIFLES
IGQEITYILPYGGARDGTFATLFQKLDLVMADLGLTSYGISDTTLEEIFLKVAEDTGVDA
EIPPPELLVRDGRRSSSESKRNSIASVHSKTEHINGMSGKHSGKVEDLRKPTSVSGRGSM
VITGWELIRRQFLALFIKRFHHARRSRKGLIAQVVLPAIFVCLSLIFSLILPPFAEYPSL
ELQPWMYGLPQTTFYSNDMPVNVEVSRVVETLLNNPGFGTRCMDGDPLPDLPCSSSGSDW
FSPPVDQSVADIFLNGNWSMSNPSPPCQCSTPKRTIMLPDCPPGAGGLPPPQRIQNTTDT
LLNLTGRNMTDFLVKTFEHFGKERYGGISVGAINSQVRLTDAAIEEAFRDLKDLFSSSQD
NVTDQTLQKAETLLKKLGTRDNAKVWFYNQARHAMVSFLSVVNNGILRGNLPVGQDPRKY
GISVSNHPLNLTKAQLSYVAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHL
QFVSGVNPAVYWLASFAWDMCNYIIPSMIVILIFLCFQQKAYVSPPNLPALVLLLIFYGW
AITPMMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFVMELFDDDNVSNINDIVKQVL
LVFPHFCLGRGLIDMAKNQAMATLFSSFGEDRFEDPLSWDMVGKNLCAMSIQGFVMFAFT
ILIQYKFFCKPRLISAKSLSAEEEDVDVARERERVYGGKAQNDLLRICDLTKVYPGKSAP
AVDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSNGEAFLNGYSIRTEMRDVHQN
TGYCPQFDAIDDLLTGREHLEFYARLRGVPEKEVAMVAEWGIQKLGLVKYGSKSAGTYSG
GNKRKLSTAISLIGSPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEEC
EALCTRMAIMVNGRFKCLGSIQHLKYRFGDGYTVTVRVGGASPELKPVEDFVQQSFPGSV
LKEKHHNTLHYQLPHAEGALAQIFSQFTSHQQRLGVEDYSVSQTTLDQVFVNFARHQHGE
DDSRAHDNPVDISDELSLKSVKTSLEAKKV
NT seq
6753 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctggcgcagttcaccctactcttgtggaagaacttcactctccggaaaaga
caaaaggtgcggctggttgtggaggtgctgtggcctctgtttctcttctttatactggtg
tgggtgaggtccaccaataaaccaacatacaaaggccaatgtcactacccaaataaagcc
ttgccatctgctggcgtgctgccctggctccaaggtatgatgtgtaacatcgacaaccct
tgtttgaactatccaactccaggggagacgccgggccaagtcaataacttcaacaactcc
atacttgctgggatattagtggagctgcagaccaccctggtgaacagatctattctcagt
agagcacagtcgctagcagatgacgtggaccagtggacttcagtgctgtcagggacaaac
cctggttttaataatttaaatggtcaaccagtcatcctaaggaatatcctcagagaaaat
gaaaagttctctgcatacttgacagaggatttatctgttccaccaacagtcgtcaaaagc
ctaatgaatgccgaggtccagttcagtccagtgatgggcatccagagtccaggcaatctg
aggagcacactgtgcgaggggacagaactggatgagtatatccaatttagcagccaggct
gagagagcagcttttcaaaatgtcagctgttccctcactccacagcagctgattaacacc
cagcaagtccttctgcaaaacctggatgcaagaaaagtgttttctgagctacctgcagct
ctggacttgaatgcaaccgacacattggccctgataaggaaaacctctctagatgcatta
ccaattattgaagagatgaacaggttgcagaactccgtggtcttcaaggctgctggttcc
ttggatttccaagaggatatgtttggaagtgtcaacatgctgctgtgcggaaagcaggcg
agcttcaattccaccaatatgaccctcagtttaccttcacctagacagatggcaaacaac
gagtcaatttccattatgggcaacagttccgatgctttttgtcagactcttgtcgagacc
ctggagggcacacctggtctgcgctacatttggagcaccttcaaaccattactgcaagga
aaggtcctctacgcacctgatacacctgctgctcgcctcctggtgaaagaagcaaatagc
acattcaactccctggctatgttaaaggagctcgctgattcctggggtgaactcgggcca
cgtgtttgggatttctttcaaaacagtcctcaagtcaatgcaataagggctttgctggcg
aatcccgtgttcgctgccaccgtcaatcagcgtctcgatggcacaggatggacagccgcg
ctgctggccaacttcctgtacaacgggcctccagaagaccgcccgcctggaatgccacct
aacgactggcgggatgtttacaacgccactacagagatcctgaagctcctctccaaattc
cttggctgcttggatctgaacaagtttgaggcagctccaactgaaggccacctggtgaat
caagccttggagcatctgaaaaatgatacgttctgggctgccattgtctttaatgacctc
gagtcaaactccagcaagatcccaccctacgttaagtacaaaatacgcatggacattgat
gacgtggagcttaccaacaaactgaaatccaggtcatggtctcctggagccagagacaac
ccctttaacgacctgcggtatatattgggaggattcacctacctacaggacatgatggac
cacgccattatacgactgcacacattaaagacccaaccacttggtgtttttgtccagcaa
atgccatatccttgctatgtggatgacgccttcatacagagtattggaagcatcctcccc
atgttcctggtgctggctttcatgtactctgtgtgcatgaccatcaaaggcctggtgtgg
gagaaggagctccggctcaaggaagtgcttcgcgccgttggcattcagaacggcgccctc
tggtcggcaaggttcatcgagaacattgttctgctcacggttccttgtgtgcttataagt
gtcatggttaagtatggcaaagtcctacaatacagcgacccctccgttatctttgtcttc
ctcctggtgttctgcctcaccaccatctctcagtgcttcctgattagcgtcttcttctcc
aaggccaacttagcagcggcgtgcggcggcctcatctactttctcctctacctaccgcac
gtcctctgctacgcctggagggacgtcatgggttttgggaccaaggttgctgtgagttta
ttgtcctgtgtggccttcggctttggctgcgagaacttttccaagtacgaggagcaaggc
atcggtattcagtggcacaacattggcaaaagtccagaggagggcgagccctacaccttc
atcgtgtccatcgtcatcatgctcttcgatgctgccttttattgggtcctcacatggtac
attgaaaatgtctttccaggccagtatggaattcctaagccgtggtacttccctttcact
tccgcttattggtgtggaagagaaccagctactgaagaaaaccccgacctgctgaaagac
tccagtgcacaaaatgaatatctggagaagccaccacccaatatgaaagcaggggtctcc
attcgtaacctcgtcaaaatctacaagaccgggaagaagcttgcagtggacggactaagc
gtggacttctacgagagtcagatcacatcttttcttggccacaacggagcaggaaaaaca
actacaatgtccattctgaccggactgttcccgccttcatcaggaactgcgttcatcaac
ggatatgacatacgcactgacatggatcacatccggaagtacttgggcatgtgtccgcag
cataatgtcttatttgatgagctgactgtggaggaacacatttatttctatgcacggctg
aagggatgcagtcgcagcgaggttgcatctcagatggaccagatgattaaagatgttggt
ttaccgcataagcggaaagatcttgccaaaaacctgtcaggtggcatgcaaagaaagctg
tccgtggctatagccttcgtcggaggttcaaaaatcgttatcttagacgagcctacagca
ggagtggacccgtacgcccgcaggggcatctgggaactactgttaaagtacaaacaaggt
cgcaccatcattttgtccacacaccacatggacgaggcagacatcttaggcgaccgcatc
gccatcatctcccacggcaagatgcgttgctgcggctcctcgctcttcctgaagaaatgt
tttgggagcggctactatcttactctggtcagagatgggaccaaaaagatgatggctcag
aggaatggtatgatacgcagtcaggccaaagacaaacaaccggagacaggccgtccttcc
agaagcggcgcagacgatggcatcgccagtaaaacctgcgacagctctgacacaacagat
ttaaactctttgactgaacttgtggagtgccatgtccctgaggcgatcttcttggagagc
atcggtcaggagatcacttacatcctgccctatggaggagccagagatgggacctttgct
acgctctttcagaagcttgacctggtcatggctgacctcggcctgaccagctatggtatc
tctgacaccacgctggaggagatatttcttaaagtggcagaggatactggcgtggatgct
gaaataccaccaccggagctgttggtgagagacggcagaagaagctccagcgaatccaag
aggaacagcattgccagcgtccacagcaaaacagagcacatcaatgggatgagtgggaag
cattcaggtaaagtggaagacttgaggaagcccacgagtgtaagcggaagaggttccatg
gtcatcaccggatgggagctgatccgacggcagttcctggcactttttatcaagcgcttc
caccacgcccgaaggagccgcaagggactcattgcccaggtggtcttgccagccattttt
gtgtgcctatcactgatcttctccctcatccttccaccgtttgctgaatatccaagtctg
gagctgcagccgtggatgtatggcctgcctcaaaccaccttctatagcaatgatatgcca
gtaaatgtggaagtgtcgcgggtggtggaaacgctgctgaataaccccggctttgggaca
cgctgcatggacggagaccctttaccggatttaccatgttcgtccagtggctctgattgg
ttcagtccccctgtggatcagtcagtcgctgacatcttcctcaatggcaactggagcatg
tcgaacccgtccccgccctgtcagtgcagcaccccaaaacggaccatcatgttacccgac
tgtccgcctggtgcaggaggtcttcctccaccacagagaatacagaacacaacagacaca
ttgctgaatttaacaggaagaaacatgacggatttcctggtcaagacatttgagcacttt
ggaaaagaaaggtacggagggatctccgtcggagcgatcaactcacaagtccgtttaaca
gatgcagcaatcgaagaggcattcagggatttgaaagaccttttcagttcaagtcaggat
aatgtgactgatcagacgttgcagaaggctgagacgctgctgaagaagctgggaaccagg
gacaacgccaaggtttggttctacaaccaggcgcggcatgccatggtttccttcctcagc
gtggtcaacaacggcatcctgagaggaaatctgccagtgggacaggatccacggaagtac
ggcatctccgtctctaaccaccccctcaacctgaccaaggcacagctctcctacgtggcc
atggccacaacctccactgacgtggtggtgtccatctgcgttatatttgccatgtccttc
atccctgccagctttgtcctcttcctcatccaagaaagggtgagcaaagccaagcacctg
caatttgtcagcggagtaaacccagctgtctactggttggccagctttgcctgggacatg
tgtaactacatcatcccctccatgattgtgatcttgatattcctctgctttcaacaaaaa
gcctatgtttcccctcctaacctgcccgccttggttctgctgcttattttctacgggtgg
gctatcactcccatgatgtaccctgcttccttcatcttcagtgtgccaagcacagcttac
gtggtgctgacttgcatcaacctcttcattggtattaatggcagcgtggccacgtttgtc
atggagctctttgatgatgataacgtctccaacatcaacgacatcgtgaagcaggtgctg
ctggtattcccacatttctgtctgggcagagggctaattgacatggccaagaaccaggcg
atggcaacgctcttcagcagcttcggggaggaccgttttgaggacccgctgagctgggac
atggtgggaaagaacctctgcgccatgtccatccagggattcgtcatgtttgcgtttaca
atcctcatccagtacaagttcttctgcaaaccaaggctcatttcagcaaaatcgttgtct
gcggaagaagaggatgtggatgtggcgcgggaacgtgagcgagtgtacggaggcaaagct
cagaatgacctgctgaggatctgtgacctcactaaggtataccctgggaagagcgcccct
gctgtggacaggctctgtgtgggcgtacctgctgcagagtgtttcggcttactggggatc
aatggagctgggaaaacaaccacgttcaagatgctgacaggagacatcccagtctccaac
ggggaggcctttctaaatggatacagcattcgaacagaaatgagggatgttcaccagaac
acgggctattgtccacagtttgatgctattgatgacctgctgactggacgggagcatctg
gagttttatgcccgactaagaggagtaccagaaaaagaggttgctatggtggctgagtgg
gggatccaaaagttggggctggtcaaatatggcagcaagtcggcaggaacctacagcggt
gggaacaaacgcaaactatccacagcgatctccctgatcggatctcccccagtggttttc
ctggatgagccaaccaccgggatggaccccaaagcccgacgcttcctgtgggactgcatc
ctgagtgtcatcaaagaggggcgctcagtcattctcacatcacatagtatggaggagtgt
gaagcgctgtgcactcgcatggccatcatggtaaacggccgcttcaagtgccttggcagc
atccagcatctgaagtacagatttggtgatggctatacggtgactgtgagagtcggtggt
gcgtctcctgagctgaagcctgtggaggatttcgtccagcagtcgttcccaggcagcgtt
ctcaaggagaagcaccacaacaccctgcactaccagctcccacacgcagagggagccttg
gcccagatcttcagccagttcacctcccaccagcagaggctgggcgtggaggactactcc
gtttcccagaccactctggatcaggtctttgtgaattttgcgagacatcaacatggggaa
gacgactctcgggcccacgacaacccagtggacatttcggatgagctgtctctaaagtcg
gtgaagacctccctagaagcaaagaaggtgtaa
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integrated database retrieval system
