Cololabis saira (Pacific saury): 133420669
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Entry
133420669 CDS
T09849
Symbol
rpgrip1
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133420669 (rpgrip1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133420669 (rpgrip1)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133420669 (rpgrip1)
Cilium and associated proteins [BR:
csai03037
]
Primary cilia and associated proteins
MKS complex
133420669 (rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
DUF1512
Motif
Other DBs
NCBI-GeneID:
133420669
NCBI-ProteinID:
XP_061566415
LinkDB
All DBs
Position
20:complement(26012028..26022365)
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AA seq
1361 aa
AA seq
DB search
MTPVVDETASDLPVRDVGLMRGGLMLSVPDALRDVKPWKRHHVMKTKADPQRLFRFSRDH
LEDLCLRLQEENRELRQHTRSQEQRIRRMSARLTRLRHGRPGSAGVKDRDMEETMQELEA
RVAMLESQKEVLQNKLSLAKQHILDLGARTPYKLSKSKNLDGEGGVRRAAQTAPPRYGPT
LEDTKLEIERFRSSMTEQVRMAELELTTQELKETLREKEREMEGTVRELMKQQSDRHRIT
IRENVDVIRLQKQLSEKSAALRVTQEKFTELQEAYERQLEEGQRSLRESQSALLEKVEEL
TGQLKQERQRTLTLDGELSTTTLSLQTLDKLQERISDLEGERDLIKENYDALLKSALSGQ
SQSDNQLETHREAVQSGKMRVENIQSMDIQRLQDMLHAEREERSRLELELEKEKLRQEKR
MLEQHRERDGDFSGLMIDKREHLEREVLQYKAQISTLQDRLDSVTKEFDMSVEDLSDTLL
QIKAFRMQQESREGLRFLSAQGKMADSPRELANIQASHAETVLELQKTRNLLLLEHRITR
DLQDELNTINQKVEREREESRRRIAEKDKLLSKRAMQINTLQAQLKELAYSPRNYKRTVP
LQYTWPAGDQEVVQPIEDDLSFSQLKAGESLLEIHIKEATFTPAGLRVMGHVHPGADKSE
DIVTFCTYCLLDFELHSTPLVSGSQPNYGFTSRYALTVRDLGRLGGQGSRVRVELHQALG
GVQFVTHGGAHMSLMGAMEKRGERISGRVNIAGHEGEIVGILDFWVRLFHPAELMDAMAD
HRAARSAVTQRNPVQMSLGWQDGGHEELHDYGGGIPNELVVVLERCVGLNALWPGLLPDA
YLTYRFYDLPPHVSQMVQCAADPVFNDATSYPLAVTADVLHYLRSSSLWVYVFDDGDDQV
PPAYLAKTPIPLRALAAGRDIRGDYVLRDPAGGPRGMVRVMVKWKYPFQPPMDAPLGPQG
RRADEQSERMEGVERDERRREQVSQKPVAKPRVKTQQLEPRETKAVQKDTKAWPRPPTVT
QKSSQDVRSEPTISVKPLDTRPSAGRKRPAKATAELYQRSRHLTPEPRLAKPSLWKTTKS
SVGSSRQSTTSLSRRSSVSDARIQDLSSVDQVSLIEGEEEEERTESGDNESPESSASTSS
QSDIVIIPTKRKTRKGNKLRVEILSLSFEPSSRVALDESVQRVYVEYRLLGVPMETTETP
MSLRKPGEGEEVHYNFTRVIHVDGSQCTPLRQYLYTMLEGTDPNQGRLKFTVVSEPMDDE
EECADVGHAFLDLQELLLTGNDVIEQQIDILSVDEDEEVIGNLKVSLEAAKALTGIYQEF
HHQDAEEQTEDDEEEEEEDEEGGKKKDQIPVLDRDDDSDFY
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggtggtggacgagacggcgagcgacctcccggtccgggatgtggggctgatg
agagggggactgatgctatccgtaccagacgcgctgcgtgacgtcaagccatggaagagg
caccatgtgatgaagacaaaagcagaccctcagcggttatttcgcttttccagggatcac
ctggaggacctgtgtctgcgactgcaggaggagaacagagagctcagacagcacacgcgc
tcacaagagcaaagaatacgcaggatgtcggccaggctcactcgtcttcgccatggccgt
cctggatctgccggtgtgaaggacagggacatggaggaaacaatgcaggagctggaggcc
cgagtggcgatgttggagagccagaaagaagtgttacagaacaagctcagcctggccaag
cagcacatcctggacctgggggctcgcacgccttacaagctcagtaaaagtaaaaatctg
gatggggagggtggcgtcaggagggcggcccagactgctccgcctcgatacgggccgacg
cttgaggacaccaagttggagattgagagattcaggtccagtatgacggagcaggtgagg
atggccgagctggagctgaccactcaggaactcaaggaaacgctgagggagaaggagaga
gagatggagggaacagtccgggagctgatgaagcagcagagcgacagacacagaattacc
atcagagagaatgtggatgtaatccgtctgcagaagcagctttcagagaagagcgccgcg
ctcagggtcacccaggagaagttcactgagctgcaggaggcctatgaaagacagctggag
gagggtcagaggtcactgagggagagccagagcgctctgctggagaaagtggaggagctg
actggacagctgaagcaggaaagacagagaactctgacgctggacggggagctcagcacc
acgactctgtctctgcagaccctggacaagctccaggagaggatatcagatttggaagga
gagagggatctgattaaagaaaactatgacgctctactgaaaagtgctttgtcaggccaa
agccaatctgataaccagctagaaacccacagagaggccgtgcagagcgggaagatgagg
gtggaaaacatccagagcatggacattcaaagactgcaggacatgttgcacgcagagagg
gaggagaggagcaggctggagctggagctggagaaggagaaactgagacaagagaagagg
atgctggagcagcacagggagcgggatggagacttctcagggctgatgatagacaagcga
gagcatctggagagggaggttctccagtacaaagcgcagatctctactctgcaagacagg
ctggactcggtcactaaggagtttgacatgagtgtagaggacctgagtgacacccttttg
cagatcaaggccttcaggatgcagcaggagagtagggagggcctgcgcttcctctcggcc
caaggaaagatggctgattccccccgtgagcttgcaaacatccaggcgtcacatgccgag
accgtactcgagctgcagaagaccaggaacctgctgctgctggagcacaggatcaccaga
gacctgcaggatgaattaaatacgatcaaccagaaggtggaaagagagagggaggagagc
aggaggaggattgcagagaaagacaaacttctatcaaaaagagctatgcagatcaacact
ttacaagcccagttgaaagagttggcgtacagccccaggaactacaaacgaaccgtaccg
ctacagtacacctggccagctggagatcaggaggtggtgcagcccatcgaggatgacttg
tctttctctcagctaaaggccggggagtcactgctggagatccacattaaggaggccact
ttcacgccagcggggctccgtgtcatgggccacgtgcatccaggagcagacaaaagcgaa
gacatcgtgaccttctgcacctactgccttttggactttgagctgcactctacgccgctc
gtgtcggggagccaacccaactatggctttacgtcccgctacgctctgacggtccgggac
ctgggaagactgggaggtcaggggtcaagggtccgagtggagctccaccaggcattggga
ggggttcagtttgttacccatggaggggcacatatgtcgctcatgggcgccatggaaaag
agaggggagcgaatcagcggacgcgtcaacatcgcagggcatgagggtgaaattgtcggc
atcctggatttctgggtgcgcctcttccatcctgcagagctcatggacgctatggcagac
cacagggctgcgagatcagcggtcacacagaggaatcccgtccagatgtcgctgggctgg
caagacggcgggcatgaggagttacacgactacggcggtggaatcccaaatgaactggtg
gtcgtgctggagcgctgcgtggggctcaacgctctgtggccgggactccttcctgacgcc
tacctgacgtacaggttctacgacctgccgcctcacgtctctcagatggtccagtgtgca
gccgatccggtgttcaacgatgccaccagctaccccctcgctgtaacagctgacgtcttg
cactacctcaggtccagcagtttatgggtgtacgtgtttgatgacggggatgaccaggta
ccaccagcctacctggcgaagactcccatcccactgcgagctctggcagcaggcagagac
atcagaggcgattatgttctgagagatccggcaggaggacctcgaggcatggtcagagtc
atggtgaagtggaagtaccccttccagcccccgatggacgcgccgcttggtccacagggg
aggagagcggatgagcagagcgagcggatggaaggcgtcgagagggacgagagaagaaga
gagcaggtgtcacagaagcccgtcgcgaagccccgagtgaagactcagcaacttgagcct
agagaaaccaaagctgtgcagaaagacacaaaagcctggcctcggcctccaaccgtcaca
cagaaaagctcccaggacgttcgatcggagcccaccatctccgtaaaacccctggatact
cgtccgtcggcaggcaggaagaggcctgccaaggcgacagctgaactttaccagaggagt
cgtcacctgacacctgagccacgactggccaagccctcgctctggaaaactaccaaatct
tcagtgggatcttccagacaatcaaccacctcactgtcgaggagaagctctgtcagcgat
gcccggattcaggacctttcctccgtggatcaggtgtcactcattgaaggggaggaggaa
gaggagaggactgagagtggagataatgaatctcctgaatcttcagcatctacttcctca
caaagtgacattgtcatcattccaacgaagagaaagacaaggaagggaaacaagcttaga
gttgagatcctgtcactttcctttgagccgtcgtctcgcgtggcgctggacgagtcagtg
caacgtgtatatgtggaatatcggctgctgggcgtccccatggagacgacagagacgccc
atgtccctccgcaagcccggggagggggaggaggttcactacaacttcactcgagtgatt
catgtggacggctcacagtgcactccactcagacagtatctgtacaccatgttggagggg
acagaccccaaccagggcaggttaaagttcacggtcgtcagtgagccgatggatgacgaa
gaggagtgcgcggatgtcggacatgctttcttggacctgcaggaactactgctgacagga
aatgatgtcatcgaacagcaaattgacattttgagtgtggatgaggacgaggaggtgatt
ggaaatctaaaagtatcgctggaggcagccaaggcactgaccgggatatatcaggagttt
caccatcaagatgctgaagaacagaccgaagatgatgaagaagaagaagaggaagatgaa
gaaggggggaagaaaaaggatcagataccagtgctggatcgtgatgatgacagtgacttc
tattga
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integrated database retrieval system