KEGG   Cololabis saira (Pacific saury): 133420761
Entry
133420761         CDS       T09849                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04510  Focal adhesion
csai04512  ECM-receptor interaction
csai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133420761 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133420761 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133420761 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133420761 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:csai00536]
    133420761 (col4a5)
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   133420761 (col4a5)
Glycosaminoglycan binding proteins [BR:csai00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   133420761 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 133420761
NCBI-ProteinID: XP_061566545
LinkDB
Position
20:complement(18849790..18907075)
AA seq 1687 aa
MSKDSQSLRQLAAAALLFLSLCVAVQRSESAACHGCVGSKCDCSGVKGGKGDRGFPGLPG
QPGVPGFPGPEGPNGPRGEKGGDGPLGLSGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPG
PRGTAGCNGTKGERGLPGNLGLNGQTGLPGPPGLPGEKGDPGDVISTNRFGEKGSVGLPG
LPGTPGIPGNAGLQGPSGPAGPRGYDGRPGPPGPPGPKGNMGLNFQGPKGEKGQPGTEGP
PGPPGQVGEQKRPPETEIQRGDKGDRGYPGSPGDPGFPGQPGSSGGAKGDKGEPGEAGKR
GKPGKDGDPGAPGFPGIKGDSGLPGLPGRDGDRGQKGELGYPGPPGAVYGDNNNGGRGGG
GGQKGDPGIPGSPGSKGERGPQGLSGPPGVPGRPGGGGGGGTGAPGFPGDKGQKGTSGEP
GISLPGPPGRSGAPGDRGQQGLPGPPGYSSSGQNCVNGSPGRPGGQGERGYPGEQGQKGD
KGDTCFNCNGGSNAVPGSSGPPGPPGFPGSPGAPGNKGDRGFPGTPGSVGSPGSSGPQGP
PGFPGEKGDPGQAISASGQRGEKGDTGFPGSPGQPGLDGRPGRDGTPGSPGPKGSPGALQ
VKGTRGAPGEPGVPGFPGDRGPAGAPGYGPPGPSGDKGVQGVAGRPGPSGIPGAKGEPGL
AVAEKGLPGPRGQDGQPGSPGTAGSPGQNGQPGFPGSPGGKGDPGLPGIGLPGPPGVKGF
PGISGQPGAPGEPGRPGVDGLPGSPGFGGPKGDPGFGQPGSPGLPGIPGAKGFYGPKGDS
GFPGSPGQPGRSGVDGGPGQKGDAGIPGIPGGRGPPGAPSIGAVGPPGPPGPQGALGQPG
FPGGNGAKGDPGVPGRDIQGPPGDRGSPGFPGSPGGIGPAGAPGGPGRDGFPGGPGLKGD
MGPMGPPGPGGGPGGPGGPGGPGAKGEPGFPGRDGSQGPSGAKGERGQSGAPGPQGISQP
IAAIKGTKGDLGQPGASGFPGQKGERGVSGEPGLPGSDGRPGTPGPAGLKGEAGIPGGPG
GPGAPGLKGTIGDMGIPGPTGQKGESGIPGRSGGPGSPGGPGFPGAKGEPGSAGVGPPGV
QGPKGDAGSPGYPGGPGQKGSPGPSGLPGGPGGPGFKGDPGLPGFQGSPGIPGAKGLDGG
PGAPGLPGSAGRPGESGRPGGPGLPGDKGQAGRDGIPGPAGVKGDPGLPGYGGPGTPGIP
GGPGAKGEPGLPGPSGSPGFPGSKGDGGFPGSPGPPGNSGPQGSPGPAYQGPKGLQGPPG
PPGRGGSPGPQGARGPPGSGGLKGDKGIPGSPGQPGFPGSKGDPGVSGLPGSPGFPGGSG
GKGDVGLPGVPGFPGQKGDPGSPGASGLSGDPGDVGAPGLPGDNAVPPPPYTVKGDPGIP
GSPGGPGSQGAPGSPGRDGSPGGPGGPGDPGSEGPPGFSGAPGRKGDNGPAGQPGGRGFP
GPPGSDGPQGPPGLPGSVSAAHGFLITRHSQTGEVPYCPDGTSPIYDGYSLLYVQGNERA
HGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPQPMPMSMAVITGESIK
PFISRCSVCEAPAMVIAIHSQTIQIPSCPRSWEPLWIGYSFMMHTSAGAEGSGQALASPG
SCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEEGDMFRKPQSETLKAGNLRTRVSRC
VVCMKRT
NT seq 5064 nt   +upstreamnt  +downstreamnt
atgagtaaagactctcaaagcctgcgccagctcgcggcggcggcgctgctcttcctcagc
ctgtgcgtcgcggtgcagcggtccgagtctgcggcttgccatggatgtgtaggatccaaa
tgcgactgcagtggagttaaaggaggaaagggtgacaggggcttcccaggtctcccagga
caacctggagtcccggggttcccaggacctgagggaccaaacggacccagaggagagaag
ggaggtgatgggcctctaggactatctggtccaaaaggaattagaggcccgtctgggttg
ccaggattcccaggaacgccaggacttccgggtctaccaggacaggacggccccccagga
ccaagaggaacagcgggttgtaatgggacaaagggtgaaaggggtctcccaggaaattta
ggactcaatggacagacaggtctcccgggtccacctggtctgccaggagaaaagggagac
ccaggtgatgtgatttccaccaatcgttttggagagaaaggatcggtaggattgcctgga
ttacctggaactcctggtattcccggtaatgcaggtttacaaggtccaagtggccctgct
ggaccaagaggctatgatggtcgtccaggtcctcctggtccccccggaccaaagggaaac
atgggactgaacttccaaggacctaaaggagaaaagggtcagccaggtaccgaaggccct
cctggtcctccaggacaggtcggagaacagaagaggcccccagagacggagattcagaga
ggagacaagggtgaccgaggatatcctggttctccaggtgatccaggctttccaggacaa
cctggttcctctggtggagcgaaaggtgataagggagaaccaggagaggcaggcaaacga
ggaaaaccaggaaaagacggggatccaggtgctccaggattccctggaatcaaaggagac
tcaggccttccaggtcttccaggccgggatggagacagaggacaaaaaggtgaacttgga
tacccaggtcctccaggagcggtatatggagataataataatggaggtcggggcggcggc
ggcggtcaaaagggcgaccccgggattcctggatcacctggaagtaaaggagaaagagga
ccacaaggtttatcaggacctccaggagtgccaggacgcccgggcggcggaggcggtggt
gggactggagctccaggcttcccgggagacaagggtcagaaaggaacctcaggcgagccc
ggcatctctctgccaggtccaccaggaaggtcaggagctcctggggaccgtggtcagcag
ggactccccggacctccgggctattcctcctcaggacaaaactgtgttaacgggtcgcct
gggcgccctggggggcagggagaaagaggttaccctggcgagcaggggcagaaaggtgat
aagggcgacacctgcttcaactgcaatggaggaagcaatgctgtccccggatcctcagga
cctccaggaccacccggattccctggatctcctggcgctccaggtaacaagggagacaga
ggattcccaggaacacctggttctgtcggttctcctggaagctctggtcctcaaggtccc
ccaggtttccctggagagaaaggagatccaggccaggccatctcagcctccggtcagaga
ggagagaagggagacactggcttccctggatcccccggtcagcccggtctggatggtcga
cccggccgtgacggaacccccggatctcctggtcccaagggatctcctggtgctctgcag
gtaaaaggaacacgaggggccccaggtgagccaggtgtccctggcttccctggagacaga
ggcccagcaggggcccctggctacggacctccaggtccatcaggagacaaaggtgtgcag
ggcgttgccggaagacctggaccttctggaataccaggtgccaaaggtgaaccaggtctg
gcagtggcagagaaaggtttaccgggacccagaggacaggatggtcagccaggatcccct
ggtaccgcaggttccccaggccagaatggtcagcctggtttccctggttcaccaggaggg
aagggtgaccccggactcccaggcattggactcccaggtccccctggagtgaaaggattc
ccaggtatttccgggcagccgggtgctcctggagaaccaggcagaccaggagtagatgga
ctccccggctccccagggttcgggggacccaagggtgatcctggctttggacagcctggt
tctcctggtttaccaggaatacctggagctaaaggattttacggaccaaagggagattcc
ggtttccctggctcccctggtcaacctggacgatctggagtagatggaggccctggacaa
aaaggtgacgctggaatacctggcatccctggcggtcgtgggccacctggagctccctcc
attggcgcagttgggcccccaggccctcctggacctcaaggcgcactaggacaaccagga
ttccctggtggaaacggagcaaagggagaccctggtgttcccggtcgagacatccagggt
ccaccaggagacagaggaagtccaggtttcccaggttccccaggaggaattggacccgca
ggagcccctggaggacccggtcgggatggcttccctggagggccaggtctgaagggtgac
atgggtcccatgggaccaccaggaccaggtggtggacctggcggcccaggaggacccggt
ggtccaggagccaaaggagaaccaggattcccaggtagagatggttcacaaggtccctct
ggagccaaaggagagaggggacaatccggagcccctggaccccagggtataagtcagcca
atagcggctataaagggaaccaaaggagatcttggacaaccaggtgcatcaggtttccca
gggcagaaaggagaacgtggtgtctcaggtgaacctgggctgccaggatcggacggacgt
cccggaacaccaggaccagcgggtcttaagggtgaagctgggatcccaggaggcccagga
ggtcctggagctccaggactcaaaggcaccattggagacatgggaattccaggaccaacg
gggcaaaagggtgaatcaggtattccaggaaggtcaggaggcccaggttcgccaggaggg
cctggcttccctggagccaaaggagaacctggttcagccggtgttggaccaccaggagta
caaggaccaaagggagacgcaggttcaccaggatacccaggcggtccaggacagaaggga
agcccaggaccatccggtctcccaggaggtccaggaggtccaggcttcaaaggcgacccc
ggtctcccaggattccaaggttcccccggtatccccggcgcaaagggtcttgacggtggt
cccggtgctcctgggctacctggatctgcaggtagaccaggagagtccggtcgaccagga
ggacctggactgcctggggacaagggtcaggcgggtcgggatggaattccaggaccagcc
ggagtcaaaggagacccaggtcttcccggttatggtggtcctggtactccaggaattcca
gggggtccaggtgccaagggagagccaggtcttcctggtccctctggtagtcctggtttc
cccggtagtaagggagatggcggcttcccaggatctccaggccctccagggaattcaggt
cctcaagggtctccaggaccagcttaccagggccctaaagggctccaaggaccccctgga
ccacctggaagaggaggttcacctggcccacaaggtgcccgtggacccccaggaagtggc
ggccttaagggagacaagggaattccaggctctccaggccagcctggcttcccgggaagt
aaaggagaccctggtgtttcaggattaccgggctcccctggtttccctggcggctccgga
ggcaaaggagacgttggactgcctggtgtcccaggattccctggacaaaaaggagaccca
ggttcccccggtgcatccggcctttctggagatcctggtgatgttggagcacctggtctt
cctggtgacaatgcggtacctccacctccctacactgtgaaaggagatccaggaatccct
ggatctccaggcggccctggttctcagggagcacccggttcccctggacgtgacggatcc
cctggcgggcctggtggtcctggagatcctggttctgaaggtcctccgggtttcagtggc
gctcctggcagaaagggtgacaacggacctgctggtcagcctggtggtcgtgggttcccc
ggccctcctggttcagacgggccacagggcccgcccggtcttcctggatcggtctctgca
gctcacggcttcctcatcaccaggcacagccagaccggggaagtgccctactgtcccgat
ggaacctccccgatctacgatgggtattctctgctgtatgttcagggcaacgagcgggcg
cacggacaggacctcggcacagccggcagctgcctgcgcagattcagcaccatgcccttc
atgttctgcaacatcaacaatgtctgcaacttcgcctcccgtaacgactactcctactgg
ctgtccacaccgcagcccatgcccatgtccatggcagtcatcactggggagagcatcaag
cccttcatcagcagatgctcggtctgtgaagctccagccatggtgatcgcaatccacagt
cagacaatccagatccccagttgccctagaagctgggaaccactatggattggatactcc
ttcatgatgcacaccagcgccggggccgagggctccggtcaggccttggcctcccctgga
tcctgcctggaggagttccgcagcgctccgttcattgagtgccacggcagagggacgtgc
aactactacggaaactcctacagcttctggctggccaccgtggaggagggcgacatgttc
aggaaaccccagtcagagaccttgaaggcgggtaacctacggacacgcgtcagccgctgc
gtggtctgcatgaagaggacgtaa

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