Cololabis saira (Pacific saury): 133420769
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Entry
133420769 CDS
T09849
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133420769 (dennd4c)
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
133420769 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_long
PPR_3
PPR
Motif
Other DBs
NCBI-GeneID:
133420769
NCBI-ProteinID:
XP_061566557
LinkDB
All DBs
Position
20:28017127..28058597
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AA seq
1915 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYKRGRGKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVEKNL
NCGMWGSNVFLCYKKSVSASNSISYKAGLIFRYPQDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFVLTVSSGEKVYGSAIQFYEPYPVDLLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSHWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSVHDTLMLSQPVCTPLPLSGADYGTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPA
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLVNSLSNLHHQLATASIRQMPQEDSAL
DLTPIEADFTWHKKKMALEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGESSEDTKLLELDESQKSEHTVFVMPPEPAADSGPEPAPRYTYKCFPRLQLNLF
DRPRELRPTMSSRAARASLSNSPALLAKRTKQEVKLAYKMAKRFYANPLLWARCLFSHCY
SLWFICLPAGVTLAKSKSRAMQQAYNVLLKMRATEVEMLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVAQFKHGQK
GISPSQGSTRTTAAESASVPAVTDVDSLSHGSVDSSSEANGEEHNLFAPDHEMGDTADSQ
CSTGQSDQGYGSKDELHQELMETLQTAVLSADQRNSAKAQHNGGDIAGSVDSAVAVAEPP
SPVDVLPHVPSIVKLSTGSFDDGREKGTGKLFRRRSKNESVSLSDEDSSLPSGDGAKQSQ
QQQRQKAFSERSCSFSAETRAGMLLEKGVDHMASQMGADARILAAALSGVQTPPANSVSK
ALFEDVEEEPEEDKGGSLKKRPPEDGSEVPDEGKGDETEVKGKRERKDTESQEDESGGRG
ATLERADVEAGADPLSLLVTESDESASVTSQEPRPVPAVVSRNLAEEIEMYMSLRSPMGA
KASSMELQQSQGDLTDTPTLPKQPLERRSSLPVPPIKTPTGSPGDTPKRSPATVTRSKTF
AAKSKTPASTTASPSARSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDVLKSS
MKQAANVASKVWGAVASAYSYSDDEEEPDQSSGGFPVHLDENMLSVHDSDESPDRRGIPG
LVANGLNRSSTSLGSSSGSSDTGRGTQQTHLAPGRAGRGPDSEQSSSHHASSSSIYQNCA
LEVLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCPFCQTAFLPLLHIEFHDFRTIP
GFYMNPSASGDSIHSSSPHPTASSAADIKAPDLISFPEENPREAPDNRPGAHKSLVPEPV
QSDPLGLLEHQKCSGTSLTRSNSVGGPLQSLDYSQRPGHGVSTTSLPCSLQEVSDGIGTK
RPNPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVWYFRRLDLPT
HLPGLILTSEHCNHGVQLPLTSLSQDSKQVCIQLLWDNINLHQEPGEPLYLLWRNFLGKR
GTLAPSDHQEIRTLLNTIVRNIQTNDVYGPINLLIREIRHRPDGVKRQRGVYREILFLSL
IALGRENIDVEAFDREYRLAYEGLSADQLKSLHCIDAPPGVSVQSCLKCFGAPII
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggataagggtcaccgtgtgaccgactactttgtggttgccgggttgacagac
aagtccactcctctggagcaagacctgtcggagaccaagtcaagcgggcccaaagccccc
atcacggacctggccgtcataaacaagtcggcgggagagaccgtacccgagggcttcacc
tgcatcgacagcacctacagcggccagccggccaacctcaaccacggcagtctcaagagt
cccgagctcttcctgtgctataagagggggcgggggaagcctcccctcatcgacatcggg
gtgctgtacgagggtaaggagcgtctgatccagggctgcgaggtcatccaggccacgccg
tacggccgctgcgccaacgtcaacaacagctcggccacctcccagcgcatcttcatcacc
ctgcgcagagccccgccggtccagccccagaactccctggccgtcacggatatctgcgtc
atcgtgaccagcaagggcgagacgccgccacacaccttctgtaaagtggaaaagaacctc
aactgtggcatgtggggatcgaacgtcttcctgtgttacaagaaatcagtgtcggcatca
aactccatcagctacaaagccggtttaatctttcgttatccacaagacgactatgaatct
tttcctctgtcggagtcggtccctctgttctgtttgccgatgggcgccaagatcgagtgc
tgggcaccaaacactcgtgaccctctaccggtcttctccacgtttgtcttaaccgtctcc
tctggtgaaaaggtgtatggatcggctatccagttctacgagccgtatccggtggatctc
ctgagcgagaagcagaagatccagctggggctgctcaccacggtggagaagaaaatgatc
cccaaccggccggtgaacaccaacaaatgcatctgtctgctctcccactggcccttcttc
gagtccttccgcaagttcctgatgttcctgtacaagctctccgtctcgggcccgcaccct
ctgcctattgaaaagcacatctcacactttatgcacaatgtgtcgtttccttcccctcag
aggcccagaatccttgtccagctctcagtacacgacactttgatgctctcccagcccgtg
tgcacacctttaccactcagcggggccgactacggcactctgctgatgaacctgggctca
gagaactgcgccacgctgctgcacttcgtcctgctggagagcaagatcctgctgcactcg
ctgcgacccgccgtgctcaccggagtggccgaggccgtggtggctatgatcttccccttc
cagtggcagtgtccctacatccccctgtgcccgctctctctagcaggcgtcctcaacgcc
ccgtgtcctttcatagtgggcgtggactcgcgctactttgacctgtacgaccccccggca
gacgtggtctgtgtggatctggacactaacaccatctacctgtctgatgagaagagacac
agcaactggaagaaccttcccaagaagccctgcaagagtctggttaactcgctgagcaac
ttgcaccaccagctggccaccgcttcaatacgtcaaatgccacaggaagactctgcactt
gatctgacccccatcgaggcggacttcacgtggcacaagaaaaaaatggctctcgaaatg
gaaatccaggaggccttccttcgtttcatggcctccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcgccgtctgaaaaggccacggctgcagactccctttacgac
ctgcaagggtttctcaaaagccgagaccgcacccatcagaagttctactcccagctcacc
aagacccagattttcattcgcttcatcgaggagtgcaccttcgtcagcgacaaggacaca
ggcctggcgttctttgacgactgcgtggagaagctttttccctctgataaaatcacagac
aagggtaccaaggtcgaaggagagtcatccgaggacactaaactcctggagctggacgag
tctcaaaagagtgagcacaccgtctttgtaatgccccctgaacctgcggctgacagcgga
cccgaacccgctcctcggtacacatataaatgcttcccccggctgcagctgaacttgttt
gaccgtcccagagagttgcgtccaacgatgagcagccgggcggcgcgggccagtctgtcc
aacagtcccgcgctgctggctaagagaaccaagcaggaggtcaagctggcgtacaagatg
gcgaagcgtttctacgccaacccgctgctgtgggcgcgctgcctgttcagccactgctac
agcctgtggttcatctgcctgccggcgggcgtgacgctggccaagtccaagagccgagcc
atgcagcaggcctacaacgtcctgttgaagatgagggccacggaggtggagatgctggac
gaagtgtgttacagagtggtgatgcagctctgcggcgtgtggggtcttcctgtgatggct
gtgcgggtcctggtggagatgaagaaagctggagtacatcccaacgccatcacatacgga
tactacaacaaggcggtcctggaaagcccgtggccgagtcggaaccgcagcggcctcttc
atgtggaccaagttgcgtaacgtgctccgaggggtggcccagttcaagcacggtcagaag
gggatctctcccagccagggctccaccagaaccaccgcagctgagtcggccagcgtgccg
gcggtcactgacgtagacagcttgagtcacggcagcgttgacagctcgagcgaagccaac
ggcgaggaacataacctgttcgccccggaccatgagatgggagacactgcagacagccag
tgtagtacaggccagtccgatcagggctacgggtcgaaggatgagttgcaccaggagctg
atggagactttacaaacggccgtcctctcagcagaccagaggaacagcgctaaggcgcag
cataatggaggtgacatcgctggctcggtggacagcgcagtcgccgtggcggagcccccc
agccccgtcgacgtcctcccacacgtcccaagtatcgtcaaattgtccacaggaagcttc
gatgacggccgggagaaagggacaggaaagctgtttaggagacgcagcaagaatgagagc
gtgtctctgtcggacgaggactcgtcgctgccctccggggacggggctaagcagtcccag
cagcagcagcggcagaaggccttctccgaacgcagctgcagcttcagcgccgagacccgc
gccgggatgctgctggagaagggcgtggaccacatggccagccagatgggggcggacgct
cgcatcctagcggcggcgctgtccggagttcaaacccctcccgccaacagcgtgtccaag
gctctttttgaagacgtggaggaggagcccgaggaggataaggggggctcgctcaagaaa
cggccgccggaggacggctcggaggtgccggatgaaggtaaaggagatgagacggaggtg
aaggggaaacgagagaggaaggatactgaatcacaggaggatgagtccggagggcgaggg
gctaccttggagagggcggatgtggaggcgggggccgacccgctctccctcctggtgacg
gagagcgacgagtcggcttctgtcaccagccaggagccccgcccggtgcctgccgtggtg
tcccgcaacctggcggaggaaatcgaaatgtatatgagtctgaggagtcccatgggtgcc
aaggcctccagcatggagctgcagcagtcccagggagacctcacggacacccccacactc
cccaaacagcccctggagcgcaggtccagcctcccggtgcctcctatcaaaacccccacc
ggctcgccgggggacacgcccaaacggagccccgccaccgtcactcgctccaaaaccttc
gcagcaaagagcaagacgccggcgagcaccacggcgagccccagtgccaggtcgtcctcg
ctgacggcccttgtcaagtcctcgcagggggggtcgctgggctccgtcatcaactccata
tcaggcatcaagatggacacgctgctgtcgggacccaaaattgatgtactgaagtcgagc
atgaagcaggcggcgaacgtggccagcaaggtgtggggagcagtggcatcggcgtactcg
tactcggatgacgaggaggaaccggatcagagcagcggcggcttcccggtccacttggat
gaaaacatgctgtcggtacacgactcggatgagagtcccgacagaagaggaatcccaggg
ttggtcgctaacggcctgaaccggagctccaccagtctgggcagcagcagcggcagcagt
gacacgggccgagggacccaacagacgcacctggctcccggacgtgcaggcagaggaccg
gactctgagcaaagctcctcgcatcacgcttcctcctccagtatctaccagaactgtgca
ctagaggtgctgatgtccagctgctcccagtgccgctcctgcgaggcgctggtctacgac
gaggagatcatggctggctggacagcagacgactccaacctcaacaccaactgtcctttc
tgtcagacggccttccttcccctacttcacatcgagtttcatgacttccgcacgatacct
gggttttatatgaatcctagtgcgtcaggagacagcatccacagtagcagccctcacccc
acagcaagcagcgcggcggatataaaggcaccggacctcatcagcttccccgaggagaat
ccaagggaggccccggataatcgtcctggagctcacaagagtctggtcccagagccggtg
cagtcggaccccctgggtctcctggaacaccagaagtgcagcgggacttccctgacacgc
agcaacagcgtgggcggtccgctgcagagcctggactactcccagagacccggacacggc
gtctccaccaccagtctgccctgcagtctccaagaggtgtcggatggcatcggcacaaag
cgccccaaccccaaacccgtttctgtgccgtatctcagccccttggttctgcgtaaggag
ctggagaccctgctggagaatgagggagatcaagttatctacacacacaagttcctcagt
caacatccaatcattttctggaacctggtgtggtatttccgccgcttggacctgcccacc
cacctacctggtctcatcctcacctctgaacactgcaaccacggagtacagctgcccctg
acttcgctgtcccaggacagtaagcaggtctgcatacagctcctgtgggacaacatcaac
ctgcaccaggaacctggagaacccctctacctgctctggaggaacttcttggggaaacgg
ggaactctggctccatcagaccaccaggagatccgtacgcttctcaacaccattgttcgc
aacatccagaccaatgacgtgtacggaccaatcaacctgctgatccgagagatcagacat
cgtccagacggtgtcaaacgacagaggggtgtctacagagaaatactgtttctgtcactg
attgccctgggacgggaaaacatcgacgtagaggccttcgacagggagtaccggctcgcc
tacgagggactgagcgccgatcagctcaaatctctgcactgcatcgatgccccgcccggc
gtcagcgtccagtcgtgccttaaatgtttcggcgcacccatcatctga
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