Cololabis saira (Pacific saury): 133420773
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Entry
133420773 CDS
T09849
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133420773 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133420773 (dysf)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Others
Ferlins
133420773 (dysf)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133420773 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
dsRBD2
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
133420773
NCBI-ProteinID:
XP_061566577
LinkDB
All DBs
Position
20:complement(23991178..24107064)
Genome browser
AA seq
2135 aa
AA seq
DB search
MLRVFILCAERLQTPDNDVSDAYCSATYEGSKKKTKVIKNNPNPVWNEGFEWDLKGTPLD
FGAEVHCVVKDHEKMGRNRFLGECRLALRDVLNSPNLAASFTISLVDTKRNNTGATLTLQ
VSYIPPPGMAPIYQPPHQPESLPHNNPGMEMDTVTMISLDTLGEEDTESMIMVEPPDDQG
ADDGRSMVIIGPQGPPGQESPTAQTPKRSPPSYNTHGGLRKRRRGGSSHTKQLPNKPQDI
QIRVRVIEARQLPGINIKPVVKVAVSGQSKRTRIRKGNNPVFDETFFLNFFETPSDLFNE
PIFITVCDSRSLRTDAVIGEFKLDVGAVYNEHRHCFLRKWLLLCDPDDLSAGVRGYLKVS
LFVLAAGDEPPADKRECVEEKEDIEGNLLRPAGLSLRGAVFTLRIFRAEDLPQMDDAFMD
GMRQIFGFDANRKNLVDPMVEIHFAGKTVCTKIMEKNASPQWNQSLAMPIRFPSMCEKMR
IRIVDWDRASHNDVIGTTHLCMSKISAPGGEIDDDVTPRSVHSGMDDSLGFLPTFGPCFV
NLYGSPREFTAFHDPHETLNLGKGEGVAYRGRVLLEVTTKLVDKPEHKTDDIPSDDLLVV
EKFLRKRKFALFVAFYSATMLQDIDDAIQFEVSIGNYGNKFDYSCLPLASTTQFSRAVFD
GCQYYYLPWGNIKPVVVLSSEWEDIRPRIEALNMLLAVIDRLESNLQRVQLEVKAGSDLE
EVEGRVIELLDQLVQDCSQELPSLDQWPCVTPLDRALKHIRTLHLEQIIAGATALKNGPE
TELSSVLEQAEDWATRLKTMAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHTVLFSQEHCG
KHCGQLQNIFLKFPQGSGAEAKLPGQLRVKVWFGLATESKHFNEYGEGTLSVFAETYENQ
TRLALVGSWGTTGLSYPKFSDVTGRVKLPKESFKPSPGWSWAGDWFISPEKTLLFDADAG
HMAFTVEVFENQMRLPGGQWIGMPEGYTDVNGEKATPKDEVECPPGWVWEEVEWSEDLNR
AVDDQGWEYGITIPPDRRPKSWVPSEKMYHTNRRRRWIRMRRRDQQKMEALRKQRPDESD
REGWEYASLFGWRFHLKPRKTDSFRRRRWRCRMEPLEKTGQAAIFALECSLSSIEDKQED
KSITTTFGVNRPTISCFFDRGTRYHLRCYLYQARDLTAMDSDSFSDPYAFVSFLHQSQRT
VTVRNSLNPTWDQTLIFYEVEVFGDPEVTMANPPNVVVELYDEDTYGADEFLGRCVCQPS
LTPSPRLAWFPVRRGDKRAGELLAAFELIRREKPSIHHIPGQDGDFVSSTSVLDELMFPG
FLSENLQQWPEESDLPYPPPQREPNVFMVPQGIKPVLQRTAIEILAWGVRNLKSFQLASI
TSPSLQVECGGCVVQSCVIRSMKKRPNFDVNTLLLDVRLPCEELYMPPIVIKVIDNRQFG
RKPVVGQCTIQSLEEYRCSQQEDRAEEEEGEQEEWRRETSRLSSGEVFIDIDDEQPLVPD
QLADGTSSAIINLSASSSSLHGEESMDWWSKFYASTGEKNKYGTYLEQGLDTLKVYDKEL
EKVEDFAGFSDFCQTFKLYRGKTQDEGDDPSVVGEFKGMFKVYPLPDDPSASLPHRRFRK
LPPNGIEDCLVRVYVIQARGLQPKDSHGKCDPYVKITLAKKTISDHEDYVPCTLDPVFGK
LFELTCSLPLEKDLRVMLYDHDMLTKDEKIGETVIDLENRFLSKYGAMCGLPRSYCVSGV
NQWRHQLTPRQLLCRVCERQNLQKPVFEDAAIRFRGQRYTAADLEDKNASVRHLGPLKER
LSLHILRKLGLVPEHVETRALYNPLQPDIEQGRLMMWVDIFPKSLGPPGPPFNITPRKAK
KFFLRCVIWNTSDVILDDVSISGERMSDIYVRGWLDGHEHNKQKTDVHYRSLGGEGNFNF
RFLFPFHYLPAEQLCVVDRKEHFWSLDKSETKLVPKLTVQIWDNDKFSFDDYLGHLVLDL
NHMLRPAKSPEKCNLQMLNQPVDKLVSLFEQKTVKGWWPCACSQNGEKIIAGKVEMSLEI
VSEQEQEERPAGLGRDEPNMNPHLEEPHRPETSFLWFSSPYKTLKFILWRRFKWVIILFI
ILFLIFLFLGVFLYSFPNYAAMKMVGPFGPAKTAE
NT seq
6408 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcgtgtttatcctgtgtgcggagcgtctgcagacgccagacaatgacgtcagc
gacgcctactgcagcgccacctatgaagggtccaagaagaagacaaaggtcatcaaaaac
aaccccaatcctgtttggaatgaggggtttgagtgggacctgaaggggacccccctggac
ttcggagcagaggtgcactgtgtcgtcaaagaccatgagaagatgggaagaaacaggttt
ctgggggagtgtcggctggccctcagagacgtcctcaactctccgaacctggctgcgtcc
ttcaccatctccctggtggacaccaagaggaacaacacaggggccacgctgaccctgcag
gtctcctacatccctcctccagggatggctcccatctaccagcctcctcaccagccggaa
tccctgccgcataacaaccccggcatggagatggacacagtcacaatgatttctctggac
acgctgggggaggaggacacggagagcatgatcatggtggagcccccggacgaccaaggg
gccgacgatgggcgctccatggtgattattggcccccaggggccccccggccaggagtcc
cccaccgcccagacccccaagcgctcacctccgtcctacaacacccacggtgggctgagg
aagaggaggagaggaggcagcagtcataccaaacagctgcccaacaagccccaggacatc
cagatccgcgtgcgggtcatcgaggcgcgacagttaccaggcatcaacatcaaacctgtt
gtcaaggtggcggtgtctggtcaaagtaagaggacacggatcagaaagggcaacaaccca
gtctttgatgagacgttcttcctgaacttcttcgagacaccgtcagacctgttcaatgaa
ccaatcttcatcactgtgtgtgactctcgctcgcttagaaccgacgctgtgatcggcgaa
ttcaagctggatgtgggcgccgtgtacaatgaacacagacactgcttcttgaggaaatgg
ctgctgctgtgtgaccccgacgatctctccgccggggtccgaggttacctgaaggtcagc
ttattcgtgttggccgctggagacgagccaccggcggataagcgagagtgcgtggaggag
aaggaggacatcgaggggaacctgctgaggccagccggcctctcgctgagaggagcagtg
ttcacgctgaggatcttcagagccgaagacctgcctcagatggacgacgccttcatggat
gggatgaggcagattttcgggtttgatgccaacaggaagaacttggtggatccaatggtg
gagatccactttgctggaaaaacggtctgcacgaagatcatggagaagaatgcgagtccc
cagtggaaccagagcctggccatgcccatccggtttccctccatgtgtgagaagatgagg
atcagaattgtggactgggatagagccagtcacaacgacgtcatcggcaccacccacctc
tgcatgtccaagatatctgctccaggaggagagatcgacgatgatgtgactcctcggagc
gtccactctggcatggacgacagtctgggtttcctgccgacgttcggcccgtgctttgtc
aacctgtacggcagcccccgagagttcaccgccttccacgacccccacgagaccctgaac
ctgggaaaaggggagggcgtggcctaccgtgggagagttttactagaagtaaccaccaaa
ctggtggacaagccagagcataaaacggacgacatcccatcagatgatctgctggtggtg
gagaaatttctccggaagaggaagttcgctctcttcgtggcgttttactcggccacgatg
cttcaggacatcgacgatgccatccagttcgaggtcagcatcggtaactacggcaacaag
ttcgattacagctgcctccctctggcctccaccacgcagttcagcagggccgtgttcgat
ggctgccagtactactacctgccatggggaaacatcaagccggtggtggttctgtcctcg
gagtgggaagacatccgaccgaggatcgaggctctcaacatgctcctggccgtcatagac
agactggagtcaaacctgcaacgcgtgcagctggaggtgaaggcaggcagcgatctggag
gaggtggagggccgagtgatcgagctgttggatcagctggtccaggactgcagccaggag
ctcccctccctggaccagtggccatgcgttacacctctggatcgtgcgctgaagcacatc
cgtaccctccacctggagcagataatcgccggggcgacggcactcaagaacggtcctgaa
acggagctgtcctcggtgctggagcaggccgaggactgggccaccagactgaagaccatg
gctgaggagcctcagaacagtcttccagacatagtaatctggatgctgcagggcgaccgt
cgggtggcgtatcaccgcatcccggcgcacaccgtcctcttctcccaggagcactgtggg
aaacactgcggacagctgcagaacatcttcctcaagttccctcaaggcagcggcgccgag
gccaaactccccggccagctgagggtcaaggtgtggttcggtctggccacggagagcaaa
cacttcaacgagtatggcgaaggaactctgtcggtgtttgctgagacgtacgagaaccag
acccggctggctctggtgggcagctgggggacgacgggcctgtcctatcccaagttcagt
gatgtcaccgggagagtgaagctgcccaaggagagcttcaaaccctcgcccggctggtcc
tgggccggggactggttcatcagccccgagaagacgctgctgtttgacgccgacgccggt
cacatggccttcaccgtggaggtgtttgaaaaccagatgaggctgccaggcggacagtgg
atcggcatgccggagggatacaccgacgtgaatggagagaaagcgacgccgaaggacgag
gtggagtgtcctccaggttgggtctgggaggaggtggagtggagtgaagatctcaacaga
gccgtggatgatcaagggtgggagtacggcatcaccatccccccggaccgccgtcccaag
tcctgggtgccgtcagagaagatgtaccacaccaaccgccggcgacggtggattcggatg
aggcgacgggaccagcagaagatggaggctctcaggaagcagcgtccggatgagtcagac
cgggagggctgggagtacgcgtctctgttcggctggaggttccacctgaagccgcggaag
acggacagcttcaggcggcgccgctggaggtgccgcatggagccgctggagaagacggga
caggcggccatctttgctctggagtgctctctgagcagcatagaagacaagcaggaagac
aagtccatcacaactacgttcggagtcaacagaccgaccatctcctgtttctttgaccgt
gggacccgctaccacctgcgctgttacctgtatcaggccagagacctgacggccatggac
tcggacagcttctcagacccctacgccttcgtgtcgttcctccaccagtcccagaggacg
gtgacggtccgtaactccctcaatcccacctgggaccagacgctcatcttctacgaggtc
gaggtcttcggggaccctgaggtgacgatggccaaccctcccaacgtggtggtggagctc
tacgacgaggacacctacggagcggacgagttcctgggccgctgcgtgtgccagccgtcc
ctgaccccgtcaccccgcctggcctggttcccggtccgcaggggggacaagcgcgccggc
gagctgctggccgccttcgagctcatacgcagggaaaagccatcgattcatcatattcca
ggacaagatggagacttcgtcagctccaccagcgttctagatgagttgatgtttccagga
ttcctctctgaaaacctgcagcaatggccggaggagtcggacctcccctacccgcccccc
cagagggagcccaacgtcttcatggttcctcaaggaatcaaacccgtcctgcagagaacc
gccattgagatcctggcctggggcgttcgtaacctgaagagcttccagctggccagcatt
acgtctcccagcctgcaggtggagtgcggcggctgcgtggtgcagagctgcgtgatccgc
agcatgaagaagaggccgaacttcgacgtcaacacgctgctccttgatgtgagactcccc
tgcgaagagctctacatgcctccgattgtcatcaaagtcattgacaaccggcagtttggg
aggaagccggtggtcggtcagtgcaccatccagtcgctggaggagtaccgctgcagccag
caggaggatcgggccgaggaggaggagggagaacaggaagaatggagacgtgagacatcc
cgtttaagctctggtgaggtcttcatagacattgatgatgagcagcccctcgtacctgac
cagcttgcagatggaaccagctccgctatcattaacctctcagcctcttcttccagcctc
catggagaagagtccatggactggtggagcaagttctatgcgtccaccggagagaagaac
aagtacgggacgtatctggagcaaggcctcgatacgcttaaggtgtacgacaaggagttg
gagaaggtggaagactttgcaggtttctcagacttctgtcaaacgttcaaactgtaccga
ggaaagacccaggatgaaggagacgacccttcggtggtgggagagttcaagggcatgttt
aaggtttatccgcttccagacgacccgtcggcctccttaccccaccgacggttcaggaaa
cttcctcctaacggcatcgaggactgtctggtccgcgtctacgtcatccaagctcgagga
ctgcagcccaaagactcccatggaaagtgtgacccgtacgtgaagatcacgctggcgaag
aagaccatcagtgaccacgaagactacgtcccctgtacgctggaccctgtctttggaaag
ctgttcgagctgacctgctccctcccgctggagaaggacctgcgggtgatgctgtacgac
cacgacatgctgaccaaagacgagaagatcggcgagaccgtgatcgacctggagaaccgc
ttcctgtccaaatacggcgccatgtgcggcctgccccggtcctactgcgtgtcgggggtg
aaccagtggcgacaccagctgacgcccaggcagctgctctgcagagtctgcgagcggcaa
aacctgcagaagcccgtgttcgaagatgccgccatccgcttcagagggcagcgctacaca
gctgcagacctggaggacaaaaatgcgtctgtgcgtcacctcggtccactcaaggagcga
ttgtcccttcacatcttgaggaaactgggactggtaccagaacatgtggagaccagagcg
ctgtacaacccactgcaacctgacatagagcaggggcgtctgatgatgtgggtggacatc
tttcccaagtctctgggaccacccggacccccgttcaacatcacgccacgcaaggccaag
aagttcttcctgcgttgcgtcatctggaacaccagtgatgtcatcctggacgacgtcagc
atcagcggcgagaggatgagcgacatctacgtcagaggctggctcgacggacacgaacac
aacaagcagaagaccgacgtccactaccgctccctgggtggcgagggcaacttcaacttc
agattcctgtttcctttccactacctaccggcggagcagctgtgcgtcgtggatagaaag
gaacacttctggagcctggacaagtctgagaccaaactggtgcccaagctgaccgtccag
atctgggacaacgacaagttctccttcgacgactatctcggtcacctggtcttggacctg
aaccacatgctgcgtcccgccaagtctccagaaaaatgtaacctgcagatgttgaaccag
ccggtggacaagctggtgtctctgttcgaacagaaaaccgtcaaaggatggtggccgtgc
gcctgcagccagaacggagagaagatcatcgccgggaaggtggagatgtctctggagatc
gtgtcggagcaggagcaggaggagcggccggccggcctcggcagggacgagcccaacatg
aaccctcacctggaggagcctcaccgtccagagacgtccttcctgtggttctcctccccg
tacaagacgctcaagttcatcctctggagacgattcaaatgggttatcatcctcttcatc
atccttttcctcatcttcctgttcctgggtgtcttcctctactccttcccgaactacgct
gccatgaagatggtcgggccctttgggccggccaagacggccgagtga
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integrated database retrieval system
