Cololabis saira (Pacific saury): 133420811
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Entry
133420811 CDS
T09849
Symbol
nrxn2b
Name
(RefSeq) neurexin 2b isoform X1
KO
K07377
neurexin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133420811 (nrxn2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133420811 (nrxn2b)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
133420811 (nrxn2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
133420811
NCBI-ProteinID:
XP_061566629
LinkDB
All DBs
Position
20:complement(13124089..14090101)
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AA seq
1676 aa
AA seq
DB search
MTRGLRLLGWPLWPLVLFNMLTTVKMLEFGGAPGQYARYGRWEAGSVGELSFSLKSNVSQ
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPATVHMETRVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVRSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFQGWISNLK
VGEMPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSVQYGEVHCDCTHTRFKGKYCKEVEE
YAAEGLAHLTLNDQGDSSPVGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIERDPKITLNGDLVFRCEDVAALDPVTFETPDSYISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPQGPKEQKPGRELKTDYFAMELLDGYLYLLIDMG
SGKTKLRASNKKVNDGEWCHVDFQREGRKGSISVNSRSLPFSSPEGSEILDLDSDMFLGG
LPESKSELILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSALGVSSFCTRELQ
KRCSSAPCGNAGLCKEGWNRYICDCTGTGYLGTNCEIEATVLSYDGSMYLKIIMPVTMHT
EAEDVALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPET
LFAGQKLNDNEWHTVKVVRRGKSLQMSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLSFNSVPYVDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKNMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGAFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAILVRVESAKGLGDYLELHIERGKIGVIFNVGTDDITIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNDRLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QAFIKIGGGEKGRHFQGQISGLYYNGLQVLKLAAEGDPNVQTHGNLRLVGDVPSVLSTDT
TSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNADDILVASAECPSDDEDLEE
CEPGNGGELVLPIITVDSLDPPSIATRYPVIPPPPTTFHPFLTLLETTKESSPPAHGRAP
CPLDQEDCEEAIEVSAYGSGEMTETDDEDYYKNSPLVTDRTVLPPPPAAEGGVQNPRDRH
SSRHPVSHRPAQSSTPTANPEQLSPHIKQAGGGSSGSNNIPAGKMNTRDQVLLPPAHPSP
DPGHRRTPGITYPPNFPHVPTPDPTSPVAVEVQQSSSTTGMVVGIVAAAALCILILLYAM
YKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPSTAKPVTKSKKNKDKEYYV
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgacgagggggttaagattactgggttggcccctgtggcctcttgtccttttcaacatg
ctcactacggtgaagatgctggaatttggcggggcgccaggtcagtatgctcgttatggg
cgctgggaagctggatccgtgggggagctgagcttcagtctcaagtcaaacgtcagccaa
gccttggtactctacctggatgacggcgggaactgtgactttttggaactgttgattgct
ggtggtcgccttcagttgcgttttgccatccattgtgctgaacctgccacagtgcacatg
gagacccgggtgaatgacgaccgctggcacatggtcttgctcacccgcaactttcgcgag
accctgcttatggtagatggggagacaaaagtggccgaggttaggtcgaagaggaaagaa
atggctgtggtcagtgatttgtttgtgggtggaatcccacctgatgtccgcctctctgca
ctaacatcaagtactgtcaagtatgagccacctttccagggatggatctccaatctgaag
gttggagagatgcctccaactttgttaaatagccagggcattcagagtgacttggagtac
ctctgcaccaaacagaacccatgcttcaatggagggttttgttctgttcaatatggagaa
gttcactgtgactgcacccacacccgcttcaaggggaagtactgcaaggaagttgaagag
tatgctgctgaaggtctggcgcacctgacgttaaacgaccaaggagactcatctcccgtt
ggtaaggaagaatcggtcgctaccttcaaaggcaacgagttcttctgctacgacttgtcc
ctgacacccatccagagcagcactgatgagatcacgctttcgttccgaacgctgcagcgc
aacgggctcatgctgcacactggtaaatcggcagactatgtgaacctttctttgaagagt
ggcgcggtctggctggtcatcaacctgggttccggggcctttgaggcccttgtggagcct
gtcaatggcaagttcaatgacaacgcctggcatgatgtacgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctcagttgatggtattttgaccacc
actggttacacccaggaggactacaccatgttgggttctgatgacttcttttacattgga
gggagccccaacaccgcagacctgcctggatcaccagtcagcaacaacttcatgggctgc
cttaaagatgtggtctacaagaacaatgattttaagctggagctctcccgactggccatc
gagcgtgaccctaaaatcacgctgaatggtgacctggtattccgctgtgaggacgtcgcg
gctttggatcccgtaaccttcgagacccccgattcctatatctctctgcccaagtggaac
accaaaaagacgggatcgatctctttcgactttcgtaccacggagcccagtggcttgttg
ctattcagccatggtcgtcctcaaggtcctaaagagcagaagcctggaagggagctgaag
actgattactttgccatggaacttctggatggttatttgtacctgctgatcgatatgggc
tccggcaagacaaagctgagagccagcaacaagaaggtcaatgatggagaatggtgccat
gtggatttccagagggaagggaggaaagggtcaatctccgtcaacagccgcagcctgccc
ttcagctccccggagggcagtgaaatcctggacctggatagtgacatgttcttgggtggg
ctgcccgagtctaagtccgagctcatcttgccgccagaggtttggacagcgctgctcaac
tacggctacgtcggctgcgtccgagacctcttcatcgacggcaagagccgcgacgtccgc
cgcctggcagagatccagagtgctctgggcgtcagcagcttctgcacccgcgagctgcag
aaacgatgcagcagcgccccctgtggaaacgctggtctgtgcaaagagggctggaaccgg
tacatatgcgattgcactggtactggctacctgggcaccaactgtgagatagaagcgaca
gtcctcagttacgacggcagcatgtacctgaagatcatcatgccggtcaccatgcacacg
gaggctgaggacgtggcgctgcgcttcatgtcccagcgggcctacggcctgctcatggcc
accacctccaaggagtcggcagacaccctgcggctggagctggacggaggccgcgtcaaa
ctcaccgttaacctggattgtatcaggatagactgtagcctcagcaaaggacctgaaaca
ctcttcgcggggcagaagctgaacgacaacgagtggcacacggtaaaggtggtgcggaga
ggcaagagcctgcagatgtctgtggacaacgtaacagttgaaggccagatgactggcgcc
cacacgcgtctggagttccacaacattgagacgggcatcatgactgagcgtcgcttcata
tccgtggtgccgtccaacttcatcggccacctccagggcttgagcttcaacagcgtgcca
tatgtggaccagtgcaaaaacggggacatctcctactgcgagctgaatgctcgcttcggc
atgcgtcacatcattgcagatccggtgacgtttcgaacgaaaggcagctacttggcacta
gccacgttacaagcttacgcctccatgcacctcttctttcagttcaaaaccaccacgcct
gacggcctgatgctcttcaactctggagacgggagcgactttatagttgtggaactggtg
aaggggtatgtccactacgtgtttgatctcggcaatggcccgtcgttgatgaaggggaat
tctgacaaaccactcaatgacaaccagtggcacaacgtggtggtgtcccgggatgccaac
aacgtacatacactcaaaatcgactcgcgcaccgtcactcagcactccaatggagctcgt
aacctggacctcaaaggggagctgtacatcggtggcgtgacgaaaaacatgtacagcaat
ctgcccaaactgattgcatcccgggacgggtaccaggggtgtctggcctctgtggacctg
aacgggagactccctgacctgatcgcagatgccctccacagggtgggccaggtggaacga
ggctgtgatggacccagtaccacctgtacggaggaatcctgctatcatcagggggtgtgt
ctccagcagtgggagggcttcacctgcgactgcaccatgacgtcctacggaggcgcgttc
tgcaacgatcctgggacaacctacatcttcgggcgaggcggagccctcatcacatacacc
tggccacccaacgaccggccgagcacacgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaagcaattctggtcagggtggagagtgccaaaggactgggagattacctg
gagctgcacatagagcggggaaagatcggtgtgatcttcaacgtgggaacggacgacata
actatcgaggagagtgctgtcatggtgagcgacggcaaataccatgtagtgcgatttacg
cgcagtggtggtaacgccacattacaggtggacaaccagcctgtcatcgaacgtttcccc
tcagggaactttgataatgaccgcctggctattgctagacaaagaatcccataccgactt
ggtcgggtagttgacgagtggctactcgacaaaggtcggcagctgaccatcttcaacagc
caggcgttcatcaaaatcggtggtggagagaagggccgccacttccagggccagatctca
ggcctgtactacaacggcctgcaggtgctcaagctagcagctgagggcgaccccaacgtc
cagacccacggcaatctgcgactggtgggggatgtgccctcagtgctgagtaccgacacc
acttccaccaccccgctggctgatatgtccaccaccatcatggagacaaccaccaccatg
gctacgactaccacacgcaaacaacgctcgcctaccatgagggacagtgtcacgcagaat
gcagatgacatcttagttgcttcggctgaatgccctagtgatgatgaagatttggaggag
tgtgagcctggaaatggaggtgaattagtgttgcccataattacagtggattccctagac
cccccatcaattgccacccgctacccggtaatccccccgccccccaccacgttccacccc
ttcctgaccctgctcgaaaccaccaaagagtcgtcccccccggcccacggccgggccccc
tgccccctggaccaggaggactgcgaggaggccattgaggtgtcggcctacggctcgggg
gagatgacggagacggacgacgaagactattacaaaaactcccccctagtcaccgacagg
actgtcctccctcccccccctgcggccgagggtggagtccagaacccccgagaccgccac
tcctcccgccaccccgtctcccaccggcccgcccagtcctccacccccacggccaacccc
gagcagctcagtccgcacatcaagcaagccggcggcggcagcagcggtagcaacaacatc
ccggccgggaaaatgaacacccgggaccaggtgctgctgccaccggcccacccgtccccg
gaccccggccaccgcagaaccccggggataacctaccctcctaactttccccatgttccc
actccagaccccacgtcccccgtcgccgtggaggtgcagcagtccagcagcaccaccggc
atggtggtgggcatcgtggcggcggccgccctctgcatcctcatcctgctctacgccatg
tacaagtaccgcaaccgcgacgagggctcctaccaggtggaccagagccgcaactacatc
agcaactcggccacgcagagcaacggcgctctggtgaaggagaaacagcccagcactgcc
aagcccgtcaccaagagcaagaagaacaaggacaaggagtactacgtctga
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integrated database retrieval system