Cololabis saira (Pacific saury): 133420817
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Entry
133420817 CDS
T09849
Symbol
ppargc1a
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator 1-alpha isoform X1
KO
K07202
alpha peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04371
Apelin signaling pathway
csai04910
Insulin signaling pathway
csai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133420817 (ppargc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133420817 (ppargc1a)
04920 Adipocytokine signaling pathway
133420817 (ppargc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csai03029
]
133420817 (ppargc1a)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
133420817 (ppargc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SR-25
Motif
Other DBs
NCBI-GeneID:
133420817
NCBI-ProteinID:
XP_061566648
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Position
20:28948576..28986581
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AA seq
1287 aa
AA seq
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MAWDRCNQDSVWRELECAALVGEDQPLCPDLPELDLSELDVSDLDADGFLGGLKWYSDQS
EIISTQYGNEASNLFEKIDEENEANLLAVLTETLDSIPVDEDGLPSFEALADGDVTNASD
RSCPSSPDGSPRTPEPEEPSLLKKLLLAPANSQLSYNQYTGGKAQNHAASSNHRIRPPPA
IVKSESPWNGKARGGSSQQNRPVRRPCTELLKYLTATDDILLHTKASEPKGAWGGASSRD
KSGLGLGASSSSSSPSSSSTSSFSSLSSSSSSSSSTTSKKKSAVPSQQQQQQQQPQPPPP
PPQQHHQRGESRAAGECSMPGVGAGKWQRCAHDHGVEDSESASIPVGHRTYTCGHARPKL
EHGPPSEEGRPPGDVGRLAAARFIRYMHSYSLPPREGSHSCEHCREAAGATQASEGVGRR
GQSYFSSASRAPHRHITVTIKKRDERERPGHPLLSQLLTSKQRPAQFRAHVPQPTATRLP
SSKSKSAARRRESAAQVSSKVEDKTVREATEHKKRGVSLAEDSHAGLLLSPLSLDLESWV
SHLDPGLDMGLGLELGWPSQGGYGEDVDHVVDDDGVVDDDDNDHVKGSPAAVLKQGPPSP
LIPDTSFAEPTPPCIIEGPGHPHRQALSEHPDDQGHPLLAKPTTLPLPLTPESPNDHKGS
PFENKTIERTLSVEIAGTPGLTPPTTPPHKASQENPFKASLKTKLSSCSSSALTCKRARL
SESGAGTVALAPGASPGGPARKGPEQTELYAQLSKASTALPSSVTQYAVGGGLEEHRSTG
KNKKATSCGNSDHDYCQASANAKTDGGTATVTMTTAVDMTFTPGVAAAAPVPSSGKVENE
HVEYKDSAMPSSFSSSSPPPSSTSPGPLAKEQNLVSVDRETGRDRGLREKTLTQSIQIPT
EGAITVRDQLQLSASSRKPLCDQEIRAELNKHFGPPLKALYSQGGQDREPSSKLNTATAP
KSFGEGENDYYSQRLPGSSYLQAGFLPFHDELELGEGRESRFVYPWDGTPLDLLFDCSPH
SPSSSPPSSCSPSRGSVSPPSSLLLSPSRPFCWASSGSRSRSRSHSGSRSSSSRCRRRSL
SSSPDRRLSSWSRHSTDLNVFRSRTHKSPHPQSRSPLSRRPRYDSYEEYQHERLKREEYR
LDYEKREFERAVQREKQKQKAIEERRVVYVGRLRSDCTRTELKRRFEIFGEIEECAVNLR
DDGDNFGFITYRYTCDAFAALENGHTLRRLNEPQFELCYGGQKQFCKSHYTDLDSHSDDF
DPASTKSKYDSLDFDSLLREAQCSLRR
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggacaggtgtaaccaggactcggtgtggagagaattagagtgtgctgccttg
gttggtgaagaccagcccctctgcccagacctccccgaacttgacctctcagagctggac
gtcagtgacttagatgcagacggattcctggggggcctcaaatggtatagtgaccaatca
gagatcatttccactcagtatgggaatgaagcttcaaatctttttgagaagatagatgaa
gaaaatgaggccaacttgctggcagtgcttacagagaccctggacagcatcccggtggat
gaggacggattgccttcgtttgaggccctggcagacggggacgtgaccaatgccagtgac
cggagctgtccctcctctcctgacggctcaccgcgcaccccagagcccgaagagccgtca
ctgctgaagaagctccttctggcgcccgcaaactcccagctcagctataatcaatacaca
ggtggcaaggcacagaaccatgcagccagcagcaaccaccggatcagaccaccacctgcc
atcgtcaagtcggagagcccctggaatggcaaagcaagagggggctccagccaacagaac
cgcccggtgaggcggccatgcactgagctgctgaagtacctgacggccaccgatgacatc
ctgctccacaccaaagccagtgaacccaagggtgcctgggggggtgccagtagcagggac
aagagtggcctgggtctgggtgcctcttcctcctcctcctcgccgtcctcgtcatccacc
tcctcgttctcctccctgtcatccagctcttcttcctcttcctccacaacctccaaaaag
aagtcagctgtgccatctcaacaacagcagcagcagcaacagccgcagccgccgccgccg
ccgccgcagcagcatcaccagcgaggtgagagccgggctgcaggcgagtgtagtatgcct
ggtgttggggctgggaagtggcagcgttgcgctcacgatcacggggttgaggattcggag
agtgcctctatccctgttggccacagaacctacacctgcggccatgcccgccccaaactg
gagcatgggccgcccagtgaagaaggaaggccgccgggcgatgtgggccggctggctgcc
gctaggtttattaggtatatgcattcttattccctccctccccgagaggggagtcatagc
tgtgagcattgccgagaggctgcgggcgctactcaggctagcgagggcgttggcaggcga
ggccagagttacttcagcagtgccagccgcgcaccacacaggcacatcacagtaacgata
aagaaaagagacgagagagagaggccggggcaccctttacttagccagctgctcacctcc
aaacagaggcccgctcaattccgggcccacgtaccccaacccaccgctacccgtttaccc
agctctaagagcaaatcagcagctaggcgtcgtgagagcgcagcccaggtttcctcaaag
gtggaagataagactgtcagagaggccactgagcacaaaaagcggggagtgagtctggct
gaagactcgcacgcagggctccttctgtcccccctcagcctagacctagagagctgggtc
agccacctagatcccgggctagacatgggtttgggactggagctggggtggccaagccag
ggcggctatggggaggatgttgaccatgttgtcgatgatgatggtgttgttgatgatgat
gataatgaccatgtcaagggcagccctgcagcggtgctcaaacagggcccgccgagcccg
ctcatcccagatactagctttgcagagcccacccctccctgcatcatagaagggccaggg
cacccacacaggcaggcactcagcgagcaccccgatgaccagggccacccgttgttagcc
aaaccaaccaccttgccacttcctttgaccccagagtctccaaatgaccacaagggatca
ccgtttgagaacaaaaccattgaacgcacattaagtgtggagattgctggaaccccaggt
ctgacaccacctaccacgcccccacacaaagccagtcaagagaatcctttcaaagcatct
ctcaaaaccaagttgtcctcatgttcctcctcggccttgacatgcaaaagagccaggctg
agtgagtcaggcgccggaactgtggccctggccccaggcgcctcacccgggggccccgcc
aggaaggggcccgaacagactgagctttatgcgcagctgagcaaggcgtccaccgccctc
ccttcctccgtcactcaatatgcagtaggaggtggccttgaggagcatcgcagcactggc
aagaacaagaaggccacttcctgtggcaacagtgaccacgactattgccaggcatcggcg
aatgcaaagacggatgggggcacagcaactgttaccatgactacagctgtggacatgaca
tttaccccaggtgtcgctgctgctgctcccgtgcccagttctggcaaagtggagaacgag
catgtcgaatataaggactctgccatgccatcatccttttcatcatcatctcctcctcca
tcatcaacttcacctggccctttggctaaggagcagaatttagtctctgtggacagagaa
acgggccgcgacaggggcttaagggagaaaacccttacgcaaagcattcagatccccaca
gaaggggccattactgtaagggaccaactacaactttctgccagcagccggaagcccctg
tgcgaccaggaaatccgagcagagctcaacaagcactttggtccccctctgaaagccctc
tacagccagggtggccaggacagagagcccagcagcaaactgaacacggctacagccccc
aagtcctttggggagggagaaaatgactattattcccagaggctgcctggctccagttac
ctacaagcagggtttctgcccttccacgacgagctggagctgggcgagggccgtgaaagt
cgcttcgtctatccttgggacggcacccccctggacctactctttgactgctctccgcac
tcgccctccagttccccaccatccagctgctccccttcacgagggtccgtctccccgcct
tcctccctcctcctgtcacccagcaggcctttctgttgggccagcagtggatcccgctcc
cgctctcgctcccactctggctcccgcagctcctcgtcacgatgtcgcaggcgctctctc
tccagttcacccgacagacgcctctcctcctggtctcgtcacagcacagatttgaatgtt
tttcgctccagaacccacaagagcccccaccctcagtctcgatctcctctcagccgcagg
ccaaggtatgacagctacgaggagtaccagcacgagaggctgaagagggaggagtaccgg
ctggattatgagaagcgggagtttgaaagagccgttcagagagaaaagcaaaagcaaaaa
gcaatagaggagagacgggtggtgtacgtggggcgactgaggtcagactgcactcggacg
gagttgaagcgccgcttcgaaatctttggagaaattgaagaatgtgcagtaaacttgagg
gatgatggggacaattttggcttcatcacgtaccgctacacttgtgacgccttcgctgcc
cttgagaacggacacaccttacgcaggttaaacgagcctcagttcgagctgtgctacgga
ggacaaaagcagttctgcaaatcgcattacacagacctggactcccattcggacgacttt
gatccagcctccacgaaaagcaagtatgactctctggattttgatagtttgctgagagag
gcccagtgcagcctgagaaggtaa
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