Cololabis saira (Pacific saury): 133420853
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Entry
133420853 CDS
T09849
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133420853 (gigyf1a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133420853 (gigyf1a)
Surveillance factors
Other surveillance factors
133420853 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
133420853
NCBI-ProteinID:
XP_061566693
LinkDB
All DBs
Position
20:25033219..25073667
Genome browser
AA seq
1092 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVPLTEEEQRNFSMSVNSVAVLRLMGKGVVGAAPAGVARGRG
ATRGGRGRGRGEGGFYQRSIEEAEVGFSRGVREIHRSQSWDDRSFDSCFEAPMLPLFKED
AKRGERRFEKPLRREVGRPGFEEPAGPVAPGRKEYTRADSDNWRTLREEQDEEEAEAGNN
WRHSVVRRDDGGPRSAGWRDHTGPGESRRRKFDFDFRDSEGHGSGRRRAGSDGVEDGDGL
PEWCTDEEDGEMGTFDSSGAFMPLKKGGKETILEELEFKGIEEEEEEEEESFPDMEKNAA
EGDQDMESKEAMSAAGDDQTNPASPSSSPPAHCAPPSLESHLGSAVQVLDSSQLSNSQPV
KANSTPCEDLAPSGGSKAQLGTTSAAAVSSLPSLPPSSAAPLLPLSGGDTEDDEGMKHLQ
QEAEKMVASLQDTSLEEEHFTQALQQQESRNTAAALPLSHEAAMKWFYKDPQGEIQGPFT
TVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPPPLLVRQLPPTQ
RPQPNRGPAGTGNLDQERLKKQQELATAALYQQLQQQQQQQIFQLINRCSEQGMMPSMNR
SMSVPDTGSMWDMHTSASQSSGGEANLWDIMNSSQGPTLEQLQKVHSVLQQERRDAELRA
KREEEEQRKRREEKRRQQEEQKRRDEEELFRRKQCRQQQELIMKLLQQTPQQQGPGTGSS
SWSGGSSSGLAKAGKPPALALLEMQQDAERLLKQQQQQRAQQQRDRHSGFSSGSSSMGGQ
WPDGVGMWGGPGGMEGKSGSGGSSGSMGMWDEAVKNQSSLRGNSNNNMGLKNSRSSPSLT
DQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWCEQMLHALNTSANNSSSSLDVATIVAYL
KEVESPYAVLDFIRSYLGDTVEAKEFAKQFLERRAKQKANQQRQQQQLSKEVGGLNMNFP
LQDSMRGMNPSTLQSMFQANHMSKAGLYDNQGGKMKKKQPMMLHSDPSILGYSFHNAGEC
LSLNEMEMVEDY
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggcttcgtgcactgtccagtgggggg
agtgtgacatctccccctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaggatgaacccatgcagccgctggcactggtg
cctctcaccgaggaggagcagaggaatttctccatgtctgtgaacagtgtggccgtgctg
aggctcatgggaaaaggagtggttggggccgccccagctggagtggcccgtggacgagga
gcaacacgaggtggtcgaggccgaggccgaggtgaaggtggattctaccaaagaagtatt
gaagaagcagaggtggggttcagtcgtggcgtccgggagatacaccgaagccagagctgg
gacgatcggtcatttgacagttgttttgaggctcccatgttgccactcttcaaagaagat
gcaaagaggggcgaacgccgatttgagaagccgctgcggcgggaagtggggcgtcccggc
tttgaagaacctgctggtcctgtggctcctgggaggaaagagtacacaagggctgacagc
gataactggcgcactctccgagaggagcaggacgaagaagaagcggaggccggcaacaac
tggagacacagtgtagtccgcagggatgatggtggtcctcgctcagcgggctggcgggac
cacacgggtccaggcgaaagccgccggaggaagtttgactttgacttccgggactcggag
ggccacggctcaggccgccgacgtgcaggaagtgacggagtggaagacggggacggcctg
cctgagtggtgtacggatgaggaggatggagagatgggcacgtttgactcctccggagct
ttcatgcctttaaagaagggtggtaaggagacaatcctggaggagttggagttcaagggc
atcgaggaggaggaggaggaagaggaggagagtttccctgacatggagaagaacgctgct
gagggagatcaagatatggagagtaaagaggccatgtctgctgcaggggacgaccagaca
aacccagcatccccttcctcttcccctcctgcccactgtgcccctccatccctggagtcc
catcttggcagcgctgttcaagtgttggacagcagtcagctgagcaacagccagcctgtc
aaggccaacagcacaccttgcgaggacttggctcccagtggaggctccaaggcccagctg
ggcaccacctccgccgccgccgtctccagcctgccttccctgcccccttccagtgctgct
cctctcctccctctctcgggaggagacaccgaggacgatgaaggcatgaaacacctgcag
caggaggcagagaagatggtggcatccctgcaggacacttctttggaggaagagcatttc
acccaggctctgcagcagcaggagagcaggaacaccgcagctgctctgccgttatctcat
gaggccgctatgaagtggttctataaagacccacagggagagatccagggtccattcacc
acagttgagatgtgtgagtggttccaggctggctacttcaccatgaccctgctggtgaag
cggggctgcgacgagggctttcaacccctgggggacgtcattaagatgtggggccgcgtg
cccttcgctcctgggccctccccaccgcccctgctggtgagacagctcccaccaacgcag
cgcccgcagcccaaccgggggcccgccgggactggaaacctggaccaggagcgcctgaaa
aagcagcaggagctggcgacagcggctctttatcagcagctccagcagcagcagcagcag
cagatattccaactcatcaacaggtgcagtgagcagggtatgatgccttcgatgaacagg
tcgatgtcagtgccagatacagggtccatgtgggacatgcatacctcagcttcacagtcg
tcaggcggtgaagccaatctttgggacataatgaattcttctcagggtccaactctcgaa
cagcttcagaaggtacattcagttctccagcaggagaggcgagacgctgaactcagggcg
aagcgggaggaggaggagcagcgtaagcggagggaagagaaaaggaggcagcaggaggag
cagaagaggagggacgaggaggagcttttcagacgcaagcagtgtcgccagcagcaggaa
ctgatcatgaagttgctgcagcagaccccccagcagcaggggcctgggacaggctcctcc
agttggagtgggggttcctcctctgggctggcaaaggccggaaagcccccagctctggcg
ctgctggaaatgcagcaggatgcagagcggctcctgaagcagcagcagcagcagagagcc
cagcagcagagagaccggcactctggtttttcctcgggcagctcctccatgggagggcag
tggccggacggcgtcgggatgtgggggggtcccggtggtatggaggggaagagtggaagc
ggaggctcttcaggcagcatgggcatgtgggacgaggctgtgaagaaccagagcagcctg
cgggggaacagcaacaacaacatgggcttgaagaacagccgcagcagcccctcactcacg
gatcagtacatgatgcgtcggaagaggactgaggaagaggagaagctgctgaagctgctg
cagggcatgaagcctcaggacggcttcaccacctggtgtgaacagatgctgcacgctctc
aacacctctgccaacaactcctcctcctccctggatgtggccacgatagtggcatacctg
aaggaggtggagtctccctatgcagtgctggatttcatccggtcctaccttggggacaca
gtggaagccaaagagttcgccaaacagtttctggagcgacgtgccaaacagaaagccaac
caacagagacagcagcaacagttatcaaaggaagtgggtggactgaacatgaacttccca
ctgcaggactcaatgcgaggtatgaatccgagcactctgcagtccatgtttcaggccaac
cacatgagcaaagctggtctctatgacaaccaggggggaaagatgaagaagaaacagccc
atgatgctgcactctgaccccagcatcttagggtactcattccacaacgcgggcgagtgt
ctgagcctgaatgagatggagatggtggaggattactga
DBGET
integrated database retrieval system
