Cololabis saira (Pacific saury): 133420876
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Entry
133420876 CDS
T09849
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133420876
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133420876
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
PRY
SPRY
LRR_1
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133420876
NCBI-ProteinID:
XP_061566740
LinkDB
All DBs
Position
20:8864661..8894099
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AA seq
1139 aa
AA seq
DB search
MDQCEDGEEGVPPSKTSLCGGHESRSKDQRNQPGPGPGPGPGPKPKPGPGPSCVSLKSDK
SMEYIITFKGDQRSAVKRVDQQISEPPSGPSVQQHQTQLDSIFLLLEDNIVMFVKNELKK
IQRGLSPDYPESLERGLQGEDEEQRSSREAFVKITLNFLRRMKQEELAERLQSSTFAKVC
KKRLKSELKKKSQCVFEGIIKAGNPALLEQIYTELYITEGGTGEVNHEHEVRQIEAASRK
PGRAETTIRPEDIFKPPPGRKGPIRTVMTKGVAGIGKTVLTQKFTLDWAEGRTNQDIQFL
LPFTFRQLNVLREQKFSLVELVHAFFSETREICSFEDFQVVFIFDGLDESRFPLDFHNST
IVSDPRRSTSVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPECVSMVTEVRGFSDPQK
EEYFRKRFRDEEQTSRIFSHIKTSQSLHIMCHIPVFCWITATVLENVLEKVLETREGGRL
PKTLTEMYIHFLVVQAKLKKVKYDGGVGTDPHWSPESRKMVESLGKLAFEQLQKGNLIFY
EPDLRQCGIDVREASVYSGVFTQIFREESSLYQDQVFCFIHLSVQEFLAALHVHQTFINS
GVNLMEEQRKTSRWFKKGAETDLYQRAVDKALQSPNGHLDLFLRFLLGLSLETNQTLLRG
LLEPKQISSQNNQETVEYIKKKISGDLSAETSINLFHCLNELNAGSLVEEVQQSLTSGLL
STDKLSPAQWSALVFVLLSSEDLEVFDLKKYSASENVLRRLLPVVKASKKVVLSGCNLSM
YICPVLSSVLSSQSSSLTELDLSHNRLHDSGLKDLCPGLESPHCHLESLRLSGCNLSEDI
CPLLSSVLSSQSSSLTELDLSHNNLQDSGLKDLCPGLESPHCHLEYLRLSDCLISEKGCA
SLVSALSSNPSHLRELDLSCNHPGESAVKLLSAGLKDTRWRLETLRVEPAGQRWLKPGLR
KYSCQLTIDTNTVQNNIKLSDNNRKMTRVKEDQSYPDHPDRFDSWRQLLCREVLTGRCYW
EVQRSGHVYISVSYRRISRKGDSHDCVFGGNDHSWSLSCSDDDGRYSVWHNNRGTPSSSS
SSVSDRVAVYVDVPAGTLSFYTVSSDRLILIHTVNTTFTEPLYPGFGFWRVSGSSVSLC
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacggagaggagggagtccctccctctaaaacctctctgtgtggg
ggacatgagagtcggagcaaagatcagaggaatcaacctggacctggacctggacctgga
cccggacctaaacctaaacctggacctggacccagctgtgtgtccttgaagagtgacaag
tcaatggaatatattattaccttcaaaggagaccaacgttctgctgtaaagagagtggac
cagcagatctcagagcctcccagcggtccatctgtccagcagcatcagacccagctggac
tccatatttctgcttctggaggacaacattgtcatgtttgtgaagaacgagctgaagaag
atccagaggggtctgagtccagattacccagaatccctagagcgtgggttgcagggtgag
gatgaagagcagaggagcagcagagaggcgtttgtgaagatcacattgaacttcctgagg
agaatgaagcaggaggagctggctgagcgtctgcagagcagtacttttgctaaagtgtgt
aaaaagcggctgaagtctgagctgaagaagaagtcccagtgtgtgtttgaggggatcatt
aaagcaggaaacccagcccttctggagcagatctacacagagctctacatcacagaggga
gggaccggagaggtcaaccatgaacatgaagtcagacagattgaagcagcttccaggaaa
ccaggcagagcagaaacaaccatcagaccggaagacatctttaaacccccacctggaaga
aaaggaccaatcagaacggtgatgacgaagggagtggccggcatcgggaaaacagtccta
acacagaagttcactctggactgggctgaaggcagaaccaaccaggacatccagttcctg
cttccattcaccttcagacagctgaatgtgctgagagagcagaagttcagcttggtggaa
ctagttcatgcattcttctctgaaaccagagaaatctgcagctttgaagacttccaggtc
gtgttcatcttcgacggtctggatgagagtcgatttcctctggacttccacaactctaca
atcgtcagtgaccccagaagatccacctcggtggacgtgctgctgacaaacctcatcagg
gggaacctgcttccttctgctcgtctctggatcaccacacgacccgcagcagccaatcag
atccctcctgagtgtgtctccatggtgacagaggtcagagggttcagtgaccctcagaag
gaggaatacttcaggaagaggttcagggatgaggagcagaccagcaggatcttctcccac
atcaagacatcacagagcctccacatcatgtgccacatcccagtcttctgctggatcact
gctacggtcctggagaacgtcctggagaaagtcctggaaaccagagagggagggaggctg
cccaagaccctgactgagatgtacatccacttcctggtagttcaggccaaactgaagaag
gtcaagtatgatggaggagttgggacggatccacactggagtccagagagcaggaagatg
gtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctgatcttctat
gaaccagacctgagacagtgtggcatcgatgtcagagaggcttcagtgtactcaggagtg
ttcacccagatctttagagaggagagcagcctgtaccaggaccaggtcttctgcttcatc
catctgagtgttcaggagtttctggctgctcttcatgtccatcagaccttcatcaactct
ggagtcaaccttatggaggaacaaagaaaaacctccaggtggtttaaaaaaggagcagag
actgacctctatcagagagcagtggacaaggcgttacagagtcccaacggacatctggac
ttgttcctccgcttcctcctgggtctttcactggagacaaatcagactctcttacgaggt
ctgttggaaccaaaacaaataagttcacagaacaatcaggaaacagttgaatacatcaag
aagaagatcagtggggatctgtctgcagagacaagcatcaacctgttccactgtctgaat
gaactgaacgctggttctctggtggaggaggtccaacagtccctgacgtctggacttctc
tccacagataaactgtctcccgctcagtggtcggctctggtcttcgtcttactgtcatca
gaagatctggaggtgtttgacctgaagaaatactcagcttcagaaaacgttctacggagg
ctgctgccagtggtcaaagcctccaagaaagttgtgttgagtggctgtaacctctcaatg
tacatctgtccagttctgtcctcagttctcagctctcagtcctccagtctgacagaactg
gacctgagtcacaaccgcctgcatgattctggactgaaggatctgtgtcctggactggag
agtccacactgtcacctggagtctctcaggttgagtggttgtaacctctcagaggacatc
tgtccacttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctg
agtcacaacaacctgcaagattcaggactgaaggatctgtgtcctggactggagagtcca
cactgtcacctggagtatctcaggctctcagactgtctgatctcagagaaaggctgtgct
tcgctggtctcagctctgagctccaacccctcccacctgagagagctggatctgagctgc
aaccatccaggagagtcagcagtgaagcttctgtctgctggactgaaggatacccgttgg
agactggaaactctcagggtggagcctgctggacaacgatggttgaaaccaggtctgagg
aagtattcctgtcaactcaccatcgacacaaacacagtccagaacaacatcaaactgtct
gacaacaacaggaagatgacacgtgtgaaggaggatcagtcatatcctgatcatccagac
aggtttgattcctggcgtcagctgctgtgtagagaagttctgacgggtcgctgttactgg
gaggtccagaggagcggacatgtttatatatcagtgagttacagaagaatcagcaggaaa
ggagactctcatgactgtgtgtttggagggaacgatcattcctggagtctgtcatgttct
gatgatgatggtcggtactctgtctggcacaataacagaggaacaccttcctcctcctct
tcctcagtctctgacagagtagcagtgtacgtggacgttcctgctggaactctgtccttc
tacacagtctcctctgacagactgatcctcatccacaccgtcaacaccacattcactgaa
cctctctatcctgggttcgggttctggcgcgtgtctggttcttcagtgtctctgtgttga
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