Cololabis saira (Pacific saury): 133420888
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Entry
133420888 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133420888
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133420888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
NOD2_WH
LRR_6
PRY
LRR_1
LRR_4
SPRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133420888
NCBI-ProteinID:
XP_061566755
LinkDB
All DBs
Position
20:complement(356312..382684)
Genome browser
AA seq
1029 aa
AA seq
DB search
MNPALLEDDIVMFVKDQLKKIQKVLSPDYPESSESLEEDEDEEQESIRETLVKITVKFLR
RRKQEKLADLLQSNTVAVVCQSKLKDQLQKKHQHVFEGIIKAGKKTRLEQIYTELYITEG
GTGEVNDEHEVRQIEAASRKPDRAEMAVRQEDIFKPPPGRDEPIRMVMTKGVAGIGKTVL
TQKFSLDWAEGRTNQDIQFLLPFTFRQLNVLREEKFSLVELVHRFFSETKGICNFEGFQV
VFIFDGLDEYRLPLDFHNSTIVSDPRRSTSVDVLLTNLIRGNLLPSARLWITTRPAAANQ
IPPYCVDMVTEVRGFTDPQKEEYFRKRFRDEEKTSRIISHIKTSRSLHIMCHIPVFCWIT
ATVLENVLENVLETREGGELPKTLTEMYIHFLVVQAKLKKVKYDGGAETDPHWSPESRKM
MESLGKLAFEQLQKGNLIFYETDLRECGIDIRQASVYSGVFTQIFREESRLYQDQVFCFI
HLSVQEFLAALHVHQTFIKSGVNLLEEQRNTDLHQSAVDKALQSPNGHLDLFLRFLLGLS
LETNQNLLRGLMTSNQISSQNNQETIKYIKEKISEDLSAERSINLFHCLNELNDRSLVEE
VQESLRSGRLSTDKLSPAQWSALAFILLSSGDLEVFDLKKFSASQEALRRLLPVVQASKK
VLLSGCHLSEDICPLLSSVLSSQSSSLTELDLSNNHLQDSGLEQLCPGLESPHCHLESLR
LSGCHLSEDICPLLSSVLSSQSSSLTELDLSNNDLQDSGLEQLCPGLESPHCHLESLRLS
GCLISEEGSSSLVSALTSNPSHLRELDLSYNHPGESAAKLLSRVEDPRWRLDTLRVEPAG
QRWLTPGLRKYSCQLTVDTNTVNNKIKLSDDNRKMTRVGEVQSYPDHPDRFDFYPQLLCR
EVLTGRCYWEVQWSGHVYVSVSYRRISRKGDSDDCRFGGNDHSSRLYCCPGGRYRVYHNN
RETSITSSSPCPDSGRAAVYVDVPAGTLSFYEVVSDRLIHLHTFNTSFTGPLCAGFGFWF
GSTVSLCPV
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagctctgctggaggacgacatcgtcatgtttgtgaaggaccagctgaagaag
atccagaaggttctgagtccagattacccagaatcctcagagagtctggaggaggatgaa
gatgaagagcaggagagcatcagagagacactcgtgaagatcacagtgaagttcttgagg
aggaggaagcaggagaagctggctgacctcctgcagagcaatactgttgctgtcgtttgt
caatccaaactcaaagatcagctgcagaagaagcaccagcatgtgtttgaggggatcatt
aaagcaggaaagaaaacccgtctggagcagatctacacggagctctacatcacagaggga
gggaccggagaggtcaacgatgaacatgaagtcagacagattgaagcagcttccaggaaa
ccagacagagcagaaatggcagtcagacaggaagacatctttaaacccccacctggaaga
gatgaaccaatcagaatggtgatgacgaagggagtggccggcatcgggaaaacagtccta
acacagaagttcagtctggactgggctgaaggcagaaccaaccaggacatccagttcctg
cttccattcaccttcagacagctgaatgtgctgagagaggagaagttcagcttggtggaa
ctagttcatcgattcttctctgaaacaaaaggaatctgcaactttgaagggttccaggtc
gtgttcatctttgacggtctggatgagtatcgacttcctctggacttccacaattctaca
atcgtcagtgaccccagaaggtccacctcagtggacgtgctgctgacaaacctcatcagg
gggaacctgcttccttctgctcgcctctggatcaccacacgacccgcggcagccaatcag
atccctccttactgtgttgacatggtgacagaagtcagagggttcactgacccacagaag
gaggaatacttcaggaagaggttcagagatgaggagaagaccagcaggatcatctcccac
atcaagacatcacggagcctccacatcatgtgccacatcccagtgttctgctggatcact
gctacggtcctggagaacgtcctggagaacgtcctggaaaccagagagggaggagagctg
cccaagaccctgactgagatgtacatccacttcctggtggtccaggccaaactgaagaag
gtcaagtatgacggaggagctgagacggatccacactggagtccagagagcaggaagatg
atggagtctctgggtaaactggcttttgagcagctgcagaaaggaaacctgatcttctat
gaaacagacctgagagagtgtggcatcgatatcagacaggcttcagtgtactcaggagtg
ttcacccagatctttagagaggagagcaggctgtaccaggaccaggtcttctgcttcatc
catctgagtgtccaggagtttctggctgctctccatgtccatcagaccttcatcaagtct
ggagtcaacctgctggaggaacaaagaaacaccgacctccatcagagtgctgtggacaag
gccttacagagtccaaacggacacctggacttgttcctgcgcttcctcctgggtctttca
ctggagaccaatcagaacctcctacgaggtctgatgacatcaaaccaaataagttcacag
aacaatcaggaaactatcaaatacatcaaggagaagatcagtgaggacctgtctgcagag
agaagcatcaacctgttccactgtctgaatgaactgaacgatcggtctctggtggaggag
gtccaagagtccctgaggtctggacgtctctccacagataaactgtctcctgctcagtgg
tcggctctggccttcatcttactgtcatcaggagatctggaggtgtttgacctgaagaag
ttctcagcttcacaggaggctctccggaggctgctgccggtggtccaagcctccaagaaa
gttctactgagtggctgtcacctctcagaggacatctgtccacttctgtcctcagttctc
agctctcagtcctccagtctgacagaactggacctgagcaacaaccacctgcaggactct
ggactggagcagctgtgtcctggactggagagtccacactgtcacctggagtctctcaga
ctgagtggctgtcacctctcagaggacatctgtccacttctgtcctcagttctcagctct
cagtcctccagtctgacagaactggacctgagcaacaacgacctgcaggattctggactg
gagcagctgtgtcctggactggagagtccacactgtcacctggagtctctcaggctgtca
ggctgtctgatctcagaggaaggaagttcttctctggtctcagctctgacctccaacccc
tcccacctgagagagctggacctgagctacaaccatccaggagagtcagcagcgaagctt
ctgtctagagtggaggatccccgctggagactggacactctcagggtggagcctgctgga
caacgatggctgacaccaggtctgaggaagtattcctgtcaactcaccgtcgacacaaac
acagtcaacaacaagatcaaactgtctgatgacaacaggaagatgacacgtgtgggggag
gttcagtcgtatcctgatcatccagacaggtttgatttctatcctcagcttctgtgtaga
gaagttctgacgggtcgctgttactgggaggtccagtggagcggacatgtttatgtatca
gtgagttacagaagaatcagcaggaaaggagactctgatgactgtaggtttggaggaaac
gatcattcctcgaggctgtactgttgtccaggtggtcggtaccgtgtctatcacaataac
agagaaacatccatcacctcctcatctccatgtccagactctggcagagcagcagtgtac
gtggacgttcctgctggaactctgtccttctatgaagtcgtctctgacagactgatccac
ctccacaccttcaacaccagcttcactggacctctctgtgctggatttggattctggttt
ggttcgacagtgtctctgtgtccagtttag
DBGET
integrated database retrieval system
