Cololabis saira (Pacific saury): 133421373
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Entry
133421373 CDS
T09849
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00310
Lysine degradation
csai00514
Other types of O-glycan biosynthesis
csai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133421373 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
133421373 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133421373 (colgalt1a)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
133421373 (colgalt1a)
Glycosyltransferases [BR:
csai01003
]
O-Glycan biosynthesis
O-linked Gal type
133421373 (colgalt1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
133421373
NCBI-ProteinID:
XP_061566902
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Position
21:12492565..12499629
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AA seq
605 aa
AA seq
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MHLLALLLLLQTCCCPVWGYFAEERWSPESPLQAPRLLLALICRNSEHSLPYFLGTIERL
NYPKDRMALWVATDHNEDNSTFILRDWLLKVQNLYHYVEWRPEERTRTYRDEEGPKQWTD
LRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNVLWKLMKENKTIIAPMLESRAA
YSNFWCGMTSEGYYKRTPAYIPIRKQVRRGCFAVPMVHSTFLIDLRKEASKELAFHPPHP
QYSWAFDDIIVFAFSTRMADVQMFVCNKETYGYLPVPLRAHNTLQDESDSFLHSLLEVSV
RHSPVRPSKYIPVPTKQPDKMGFDEVFMINLQRRTDRRERMLTALHEQEIACKVTAAVDG
KAMNVSEVQAMGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKMVVERGLQTSLVIEDD
LRFEVFFKRRLMNLMSEIDSEGLDWDLIYIGRKRNQVDHPEKAVANIHNLVEADYSYWTL
GYMISLQGAQKLLNAEPLKKMLPVDEFLPIMYNKHPIKDYMDQFETRDLKAFSAEPLLVY
PTHYTGDPGYISDTETSTVWDNEKVRTDWDRARSGKTREQAKISSEAQNSDVLQSPLDSI
ARDEL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgctcgccctgctgctgctgctgcagacctgctgctgtcccgtgtggggatat
ttcgcggaggagcgctggagccccgagtctcctctgcaggctcctcgtctcctgctcgcc
ctcatttgcagaaactccgagcactccttgccctatttcctgggtacaatcgagcgcctc
aactatcccaaagatcgcatggctctctgggtagcaaccgatcacaatgaggacaactct
acattcattctgcgtgactggcttttaaaggtgcagaacctttaccattatgtggagtgg
aggccagaggaacgaaccagaacatacagggatgaagaaggtccaaaacaatggacagat
ctgcgttatgagcatgttatgaagcttcggcaagtagcactcgagtctgctcgtgaaatg
tgggctgactatttcatgctggtggattgcgataacctcctcaccaatcccaacgtgctc
tggaagctcatgaaagagaacaagaccataatcgcgccgatgcttgagtcccgtgcagct
tattcaaacttctggtgtggaatgacctccgagggttactacaagcggacgcctgcttac
atacctatcagaaaacaggtacggaggggctgctttgctgtccccatggttcactccacg
ttcctgattgacctcaggaaagaggcgtccaaggagcttgcctttcaccccccacatccc
cagtacagctgggcttttgatgacatcattgtgtttgcgttctctactcggatggcagat
gttcaaatgtttgtatgtaacaaggagacctacggttacttacctgtaccgctacgggcc
cacaatactttgcaagatgaatctgacagcttcttgcactccctgttggaagttagtgtg
agacactccccagtgaggccttcaaaatacatacctgttcccacaaaacaacccgacaaa
atgggctttgatgaggtgttcatgatcaacctgcagaggcggactgatcgcagagagcgt
atgctgacggccctgcatgagcaggagatcgcatgtaaggttactgctgctgtagatgga
aaggcaatgaatgttagtgaagttcaggctatgggcatccacatgctccctggatacagt
gacccttaccatggtcgaccgctgacaaagggagagctgggctgctttctctcccactat
aacatctggaaaatggttgtagagcgtggactgcaaacatctctggtgatcgaagacgac
ctgcgctttgaggttttcttcaaacgtcgcttgatgaatctgatgagtgagattgattct
gagggactagattgggatctcatttatattgggcggaaaagaaatcaagtggatcaccca
gagaaagcagtggcaaatatacacaatttagttgaagctgactattcatactggacacta
ggttatatgatatcattacaaggtgctcagaagcttttgaatgcagaaccactaaagaag
atgttgccagtggatgaatttcttcccatcatgtataataaacaccccatcaaggattat
atggatcagtttgaaaccagggatctcaaggcgttttctgcagagcctcttcttgtgtat
ccaacgcactatacgggtgacccgggctacatcagcgacactgagacttccactgtttgg
gacaatgaaaaggtccgcacggactgggacagagcacgctcaggaaaaacccgggagcag
gccaagatcagcagcgaggcccagaactcagatgtgctccagtcccctttggacagtata
gcacgggatgagctgtga
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