Cololabis saira (Pacific saury): 133421396
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Entry
133421396 CDS
T09849
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133421396 (ddx17)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133421396 (ddx17)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133421396 (ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
133421396
NCBI-ProteinID:
XP_061566950
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All DBs
Position
21:28427581..28438464
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AA seq
632 aa
AA seq
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MRGSYGDRDRDRGRDRGGPRFGSSRGGQPSGKKFGNPGDRLRKKRWDLEELPKFEKNFYT
EHPEVQRMSQYDIDEYRRKKEITVRGSGCPKPVTSFNQAHFPQYVMDVLMQQNFKEPTAI
QSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELA
QQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLR
RCTYLVMDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDNVQI
NVGALELSANHNILQIVDVCMDNEKDQKLIQLMEEIMAEKENKTIIFVETKKRCDDLTRR
MRRDGWPAMCIHGDKSQPERDWVLSEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQVINPKLLQLVDSGRG
GGGGGRSRFRGSNSNNPNLMYQDECDRRMRSGGSSSSYSRESRGGNSRDGERSSSSSSSY
RDRSSRDGGRSYGSSSSSYSQYQNSSSSSQYSSSRAGSGSAGAAVPAPPPSSSSGPQPLM
AQQFNPPQPMMGLMGHSPFQFAPSSSSTPGRK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagaggatcctacggagacagagaccgagaccgaggtcgtgacagaggcggccccagg
ttcgggtccagcaggggcgggcagccgtcggggaagaagtttggaaatcctggggaccgt
ttacggaagaagagatgggatctggaggagcttcccaaatttgagaagaacttctacact
gagcaccccgaggtgcagcggatgagccagtatgacattgatgaatatcgtagaaagaag
gaaatcactgttcgtggttccggctgcccaaaacctgtaaccagcttcaatcaggcacac
tttccacaatacgtgatggatgtactgatgcagcagaatttcaaagagcccacagccatt
cagtcacagggtttccctctggcccttagtgggagagacatggtgggcatcgctcagacc
ggctctgggaagaccttagcgtatttgcttcctgccattgtgcacatcaatcaccagccc
tacttggagcgaggagatggacccatttgtttggtgttggcccctacaagagagctggct
cagcaggtccagcaggtggcctacgactatgggaagtcttctcggattaaaagcacctgt
gtgtatggcggtgctccgaagggacctcagatccgggacctggagagaggtgttgagatc
tgcatcgctactccaggtcgtctgattgacttcctcgaggcaggaaagaccaacctgcgg
cgctgcacctacctggttatggatgaagctgatcgcatgctggatatgggttttgaacca
cagatacgcaaaattgttgaccagatcaggccggacagacagaccctcatgtggagcgct
acttggcctaaagaggtgcgccagctggcggaggacttcttgaaggacaatgtgcaaatc
aatgtcggagctctggagctcagtgccaaccacaacatccttcagattgttgacgtttgc
atggacaacgaaaaggatcaaaagttgatccagctgatggaagagatcatggctgagaaa
gaaaataagaccatcatctttgtagagacgaaaaaacgctgtgatgacctgacacgcagg
atgagacgtgatgggtggccagcaatgtgcattcacggtgacaagagccaaccggagagg
gactgggtactatcagagttccgtagcggcaaagctcccatcctcatcgctactgatgtg
gcctcgcgcggtttagatgtggaggacgtcaagtttgtcatcaattatgactatcccaac
tcgtcggaggactacatccatcgcatcggccgcacggcccgcagcactaacaaaggcacg
gcttacaccttcttcacccccgggaacctccggcaggcccgagagctgatccgggtgctg
gaggaggcccggcaggtcatcaaccccaaactgctgcagctggttgacagtggacgcgga
ggaggcggaggtggccggtcccgtttccgtggctccaattctaacaatcccaacctgatg
taccaggacgagtgtgaccgccgcatgcgttccggcggaagcagcagcagctacagccgc
gagagccgtggaggaaacagccgcgacggagagcgctcgtcttcctcctcctcctcttac
agggatcgcagcagcagggatggaggacgcagctacggctccagctccagctcctacagc
caataccagaacagcagcagcagcagccagtacagcagctccagggctggatctggctct
gcgggagctgccgtgccggctccgcctccatcttcctcatcaggccctcagcctttaatg
gcccagcagttcaaccctccccagcccatgatgggtctgatggggcactcgccgttccag
tttgctccttcatcatcatctacaccaggcaggaaataa
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