Cololabis saira (Pacific saury): 133421439
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Entry
133421439 CDS
T09849
Symbol
ntn1b
Name
(RefSeq) netrin-1b
KO
K06843
netrin 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133421439 (ntn1b)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Axon guidance molecules
133421439 (ntn1b)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
BNR_6
Motif
Other DBs
NCBI-GeneID:
133421439
NCBI-ProteinID:
XP_061567026
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Position
21:complement(29646901..29701951)
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AA seq
600 aa
AA seq
DB search
MRARLELWLSLLALCALAGGASGGYGLSMFAAQSSPPDPCYDENGNPRRCIPDFVNSAFG
KDVRVSSTCGGPAARYCVVTEKGEERARDCHTCDAGDPKKSHPPAYLTDLNNPHNLTCWQ
SENYVQFPQNLTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKSWVPFQYYSTQC
KKMYNRQNKAVITKQNEQEAICTDSHTDMHPLTGGLIAFSTLDGRPSAHDFDNSPVLQDW
VTATDIKVIFSRLHTFGDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVKDREGN
LVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSG
RRSGGVCLNCRHNTAGRHCHYCKEGYYRDMTKSISHRRACKACDCHPVGAAGKTCNQTTG
QCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKIPVASPTSTYSSYEEPSDCESHCKVSKG
KMKITMKKYCKKDYAVQVHVLKGDKAGEWWKFTVNIISVYKQGEHRIRRGDQLLWVRAKD
VACKCPKIKPGRKYLLLGTDDDSPGQSGVVADKGSLLIPWKDLWGRRLRKFQQRDKRGKC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgcgtctggagctgtggctgagcctgctggcgctgtgcgcgctggccggaggc
gcgtccggcggctacgggctcagcatgttcgccgcgcagtcctcccccccggacccctgc
tacgacgagaacgggaacccccggaggtgcatccccgacttcgtcaactccgcgttcggc
aaagacgtgcgggtgtccagcacctgcggcggccccgcggcgcgctactgcgtggtgacc
gagaagggcgaggagcgcgcccgggactgccacacctgcgacgccggggaccccaagaag
tcccatccgcccgcctacctgaccgacctcaacaacccgcacaacctcacctgctggcag
tcggagaactacgtgcagttcccgcagaacctcaccctcaccctgtccctggggaaaaag
tttgaggtgacctacgtttctctgcagttctgctcccccagaccggagtccatggccatc
tacaagtccatggactacggcaaatcctgggtgccgtttcagtattactccactcagtgc
aagaagatgtacaaccgccagaacaaggcggtcatcaccaagcagaacgagcaggaggcg
atctgcacggactcccacaccgacatgcaccccctgacgggggggctgatcgccttcagc
accctggacggacggccgtcggcgcacgacttcgacaactccccggtgctgcaggactgg
gtgacggccaccgacatcaaggtgatcttcagccggctgcacacgttcggggacgagaac
gaggacgactcggagctggcccgagactcctacttttacgcagtgtccgacctgcaggtc
ggaggacggtgcaagtgcaacgggcacgcgtcgaagtgcgtcaaggacagagaggggaat
ctggtgtgcgagtgcaaacacaacacggcgggaccggagtgcgacaggtgcaaacctttc
cactacgaccggccctggcagcgcgccacggccagggaggccaacgagtgtgtcgcctgc
cactgcaacctgcacgcccgccgctgccgtttcaacatggagctgtacaagctgtcgggc
cgcaggagcggcggcgtctgcctcaactgtcgtcacaacacggcgggacgccactgccac
tactgcaaggagggctactacagggacatgaccaagtccatttctcaccgcagagcttgt
aaagcatgtgactgccatccggttggagcagcaggaaagacgtgcaaccagaccactggc
caatgcccctgcaaggacggggtgacggggatcacctgcaaccgctgcgccaagggctac
cagcagagccgctcccccatcgctccttgcatcaagatcccagttgcatctccaacgtca
acttacagcagttatgaagagccatcagattgtgaatcccactgtaaagtttcaaaagga
aaaatgaagatcaccatgaagaaatactgtaaaaaagactatgctgtccaggtccacgtt
ctgaagggggacaaggcgggcgaatggtggaagttcacagtcaacatcatctccgtgtat
aagcaaggtgagcaccgtatccgccgcggggaccagctgctgtgggtgcgcgccaaggac
gtggcctgcaagtgccccaagatcaagcccgggaggaagtacttgctcctgggcacggac
gacgactcccccggccagagcggcgtggtcgccgacaagggaagcctgctcatcccctgg
aaggacctgtggggccgccggctcaggaagttccagcagcgtgacaagaggggaaagtgc
taa
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