Cololabis saira (Pacific saury): 133421449
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Entry
133421449 CDS
T09849
Symbol
hdac5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
133421449 (hdac5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133421449 (hdac5)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
133421449 (hdac5)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
133421449 (hdac5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
133421449
NCBI-ProteinID:
XP_061567039
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All DBs
Position
21:complement(36624225..36745058)
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AA seq
1142 aa
AA seq
DB search
MLLHPTVSGLCAMLQTIYETESCFSSASTDSHHQPLQLLSGKGGSGCAMPSTVVEVKSTL
PSGMQSPVGSPREQRGGGGGEPGGVPTEAPGGGAGPVDLRTEPRAGAGGAGAGGAVDTAL
REQQLQQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLQQQQELLAAKRQQE
MEQKRKLEQQRHEEQEKQRLEQQLLLLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGPA
GLNHSFSPKCWGAQHNSLEQSSQQSNTPGTLSYKLPSLLGSYEGKDDFPLRKTVSEPNLK
VRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAIEISVSSLCNSAPGSGPSSPNSSNSAI
ANGNTGSVPNIQTELRSLHQTLGADGTLSSLSLYTSPSLPNISLGLPANTHITPNQKLST
QQDAERQALQSMRGGGALTGKFLSTSSLPAGHDVEAPPPSSHSAHSSLLQHVLLLEQARQ
QTAMLVPMYSQSPLVTAERGVSAGMRSVNKLPRHRPLARTQSAPLPQSPQALQQLVVQQQ
HQHFLEKHYKMLSKGTDLPRPPPTHPEETEEELTETNDMQEDDGGPGFHRLKKEESDDSS
HSSEHLGMLVKGEDEHRSMHGKGESTESELDEEEEDDEVIQLRESEEDERESYMQHSLQH
LGVFQSSLPHRPLGRAKSSPATSVNPIKHLFTTGIVYDSLMLKHQCVCGNAHIHPEHAGR
VQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGP
ISQKMYAVLPCGGIGVDSDTVWNEMHSSAAVRMAVGSVIELAFKVAAGELKNGFAVVRPP
GHHAEESTAMGFCFFNSVAITAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYSDPNVLYI
SLHRYDDGNFFPGSGAPEEVGSGAGVGFNVNIAWTGGVEPPMGDVEYLTAFRSVVMPVAQ
QFSPDVVLVSAGFDAVEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTA
ICDASEACVSALLGEPCESVFPWPQEQPCPKACTSLERVIEIQSTHWSCLQSLPQTSGHS
PMDGPLGVQGPLGVQGQSEKDEAETVSAMASLSVDVEQPASDPAHTETNRPLEEPMEEEP
VL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacatcccacggtgtcaggattgtgcgccatgttgcagaccatttatgagact
gagtcctgtttttcctctgcaagcacagacagccatcaccagcccctgcagctcctgagt
ggtaaagggggctccggctgtgccatgcccagcaccgtagtggaggtgaagagcaccctc
ccatctggaatgcagagcccagtaggatcccccagggagcagagaggaggaggaggtgga
gaacccggtggagttcctacggaggctccgggaggaggagcaggcccggtggacctgagg
acggagccccgggccggggccgggggggccggggccgggggggccgtggacacggccctg
cgggagcagcagctccagcaggaactggtgctgctcaagcagcagcaggagctgcagaaa
cagctgctgtttgctgagttccagaagaaacacgaggtgctaacgagacaacatgaggtc
cagctgcaggaacacctgcagcaacagcaggagctgctggcagccaagcggcagcaggag
atggagcagaagaggaagctggagcagcagcggcacgaggagcaggagaagcagaggctg
gagcagcagctgctgctgctgaggaacaaggagaagggcaaagagagtgccattgccagc
acggaggtgaagctgaagctgcaggagtttctcctcagtaagaaagaacctggtcccgct
ggactgaaccattccttctccccaaagtgctggggggcccagcacaactccttggagcag
agctctcaacagagtaacacccctggaactctatcgtacaaactcccttcacttctgggg
agctacgagggcaaagatgatttccccctccggaaaacagtctcagagcccaacctgaag
gtgcgctcgcgcttgaagcagaaggtggcggagagacgcagctccccactgctgcgcagg
aaggacggaaccgtcatcagcaccttcaagaagagagccatcgagatatcagtttcctct
ctctgcaacagcgctccaggctccggccccagcagtcccaacagttccaactctgctatc
gccaacggcaacacgggatccgtccccaacatccagacagagctgagatctctgcaccag
acgctgggggctgacgggacactgagctctctgagtctgtacacctccccctctctgcca
aacatctctctgggcctcccggccaacacacacatcacccccaaccagaaactgtcaacc
cagcaagatgcagagcgtcaagccctccagtccatgcgcggtggtggagccctgacgggg
aagtttctctccacatcctccctaccggcaggacacgacgtggaggctccgccccccagc
tctcattcagcccattcctcgctgctgcagcacgtcctcctgctggagcaggcccggcag
cagactgcaatgctagtgcccatgtacagccagtccccgctggtgacggcagagagaggc
gtgagcgccggcatgcgctccgtcaacaagctgccccgccaccgcccgctggcccggacc
cagagcgccccgctgccccagtccccccaggccctgcagcagctggtggtgcagcagcag
caccagcacttcctggagaaacactacaagatgctgtctaaggggacagaccttccccgg
ccgccccccacccacccggaggagacggaggaggagctgacggagaccaacgacatgcag
gaggacgacggagggccgggctttcacaggctgaagaaggaggagtctgacgacagctcc
cactcctctgagcacctgggcatgctggtgaagggcgaggacgagcacaggagcatgcac
ggcaagggggagagcacggagagtgagctggatgaagaggaggaggatgacgaggtcatc
cagctgagggagagcgaggaggacgagagggagagctacatgcagcattccttgcagcac
ctgggtgtgttccagtcctcgttgccccacagacctctgggaagagcaaaatcctccccc
gccacctctgtcaatcccatcaagcacctcttcaccactgggatcgtgtatgacagcctg
atgctgaagcatcagtgtgtgtgcggcaacgctcacatccacccggagcacgcaggacga
gtccagagcatctggtccaggctgcaggagacgggcctgctgggtcgctgtgagaggatc
cgtgggcggaaagcctctctggacgagatccagtccgtccattcagagttccacactctg
ctctacggaaccagcccactgaaccggcacaaactggaccacaagaagctgctgggtccc
atcagccagaagatgtacgccgttcttccctgcggagggatcggggtggacagcgacacc
gtgtggaacgagatgcactcgtctgcagcggtgcgcatggcggtcgggtcggtcatcgag
ctggcattcaaggtggctgcaggggagctcaagaacggcttcgcagtggtgcgtcccccc
ggtcaccacgctgaggagtccacggccatgggcttttgtttcttcaactcagtggccatt
actgccaagctgctgcagcagaagctgggagtgggcaagatcctcatcgtggactgggac
attcaccatggtaacggcacccagcaggctttctacagtgaccccaacgtcctctacatt
tccctccaccggtatgatgatggaaacttcttccctggcagcggagctccagaggaggtg
gggtccggggcaggtgttggctttaacgtgaacatcgcctggacgggaggggtggagccc
cctatgggtgatgtggagtacctcaccgccttcaggagtgtggtgatgcccgtggcccag
cagttcagtccagatgtggtcctggtgtctgcaggcttcgacgccgtggagggccaccag
tctcctctggggggctacaacgtctcggccaagtgcttcgggcagctgacccagctgctg
atgggcctggcggggggacgggtggtgatggcgctggagggcggtcacgacctcacggcc
atctgcgacgcgtcagaggcctgcgtctctgcgctgctgggagagccgtgtgaatctgtg
tttccgtggcctcaagagcagccgtgtccgaaagcctgcacctcgctggagagagtcata
gagatccaaagtacacactggtcctgcctgcagagtttgcctcagaccagtggccactcg
ccgatggacgggcccctgggggtccagggccccctgggggtccagggccagtcggagaag
gacgaggcggagacggtcagcgccatggcctccctgagcgtcgacgtggagcagcccgct
tcggatcctgcacacacggaaaccaacaggcccttggaagagccgatggaggaagagccc
gtcttgtaa
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