Cololabis saira (Pacific saury): 133421453
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Entry
133421453 CDS
T09849
Symbol
rab40c
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133421453 (rab40c)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
csai04031
]
133421453 (rab40c)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
133421453 (rab40c)
GTP-binding proteins [BR:
csai04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
133421453 (rab40c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
133421453
NCBI-ProteinID:
XP_061567050
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All DBs
Position
21:complement(15364661..15390084)
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AA seq
279 aa
AA seq
DB search
MGTQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYAYSSGIDYKTTTILLDG
RRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREIDEHAPGVP
RILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGM
EKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMMHGRS
YSLANPAGGSKGNSLKRPKSIRPPQSPPQNCTRNNCKIS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgggcactcagggcagccctgtgaaaagctacgactacctgctcaagttcctcctggtg
ggagacagcgacgtgggcaaaggagagatcctggacagcctgcaggacggatctgcagag
tctccgtatgcctacagtagcgggatcgactataaaaccaccaccatccttttggacggc
cggagagtgaagctggagctgtgggacacctcagggcaggggaggttctgcaccatcttt
cgttcttactcccgcggggctcagggaatcctgctggtgtacgacatcacgaacaggtgg
tcctttgacggcatcgacaggtggatcagagagatcgatgagcatgctccaggcgttcct
cggatcctcgtaggcaaccgtctccatctggctttcaagcggcaagttcccaccgagcag
gcgagggcgtacgccgagaagaactgcatgacgtttttcgaagtgagccccctgtgcaac
ttcaacgtcatcgagtccttcacggagctgtcgcgcatcgtcctgatgcggcacggcatg
gagaagttctggaggcccaacagagtcttcagcctgcaggacctctgctgcagggccatc
gtgtcctgcacgccggtccacctcatcgacaagctcccgctgcccgtggccatcaagtcc
cacctcaagtccttctccatggccaacggcatgaacgccgtcatgatgcacggacgctcg
tactcgctggccaacccggccgggggctccaagggcaacagcctgaagcgacccaagtcc
atccgtcccccacagagccccccgcagaactgcacccgcaacaactgtaaaatctcctaa
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