Cololabis saira (Pacific saury): 133421486
Help
Entry
133421486 CDS
T09849
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00270
Cysteine and methionine metabolism
csai01100
Metabolic pathways
Module
csai_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
133421486 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133421486 (dnmt1)
03032 DNA replication proteins [BR:
csai03032
]
133421486 (dnmt1)
03036 Chromosome and associated proteins [BR:
csai03036
]
133421486 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
csai02048
]
133421486 (dnmt1)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
133421486 (dnmt1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133421486 (dnmt1)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
133421486 (dnmt1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133421486 (dnmt1)
Prokaryotic defense system [BR:
csai02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
133421486 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
DNMT1-RFD
BAH
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
133421486
NCBI-ProteinID:
XP_061567097
LinkDB
All DBs
Position
21:complement(13189761..13206991)
Genome browser
AA seq
1503 aa
AA seq
DB search
MPSRTSLCLPDDVKKRLQMLEEDGSSEEDQVKEKLKLVQDFLHDDAQDQLSSLEKKMKSS
EISVEVYISKVKTLLGKELHLENGSHLDDVEQNGKANGFSNGSHKDEQDDVAMGTQEDED
ASVKSPTASKGKGGRRSKGNTETKKSPASTRVTRNSGKQPTILSMFSKVQKRKSDELTEE
AANGKDEVKKEEEEVEESREEKRLKVESDAKTVPEEDKSEAVKPVAAAKTAPPKCTACRQ
YLDDSDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYDDLPQHKITHFSVYDKHG
HLCPFDSGLIEKNVELYFSCVVKPIYDDNPSFDGGVPAKKLGPINAWWITGFDGGEKALI
GFTTAFADYILMHPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDVSYEDLLNKIETTVPP
AGLNFNCFTEDTLLRHAQFVVEQVESYDEAGDSDENPIIVTPCMRDLIKLAGVTLGKRRA
ARRQAIRHPTKIEKDSKGPTKATTTKLVYQIFDTFFSDQIEQDDKDGGIKRQRCGVCEVC
QSADCGKCTACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENVVEDVPEEKTKKIAP
TKRKKQNKCKLSWIGEPVQSEGKKHFYQKVSVNEEVVEVGDCVSVSSEDPSIPLYLARIT
ALWEDNNGKMFHAHWFLRGTHTVLGESSDPLELVIVDECEDMLLNYVDGKVNVMYKAPSD
NWFMEGGVDDDLKVIEDDGKSFFYQFCYDTDYARFETPPKTSTPEEQKHRFCASCCRTKE
REKREAPHAFEPLENQDNDSKALYALACFKGQQFRVGNSVYLPPEAFHFTVKPASPVKRS
HRKEDVDEDLYPEYYRKSSDYIKGSNLNAPEPFRVGRIKEIFCHRRSNGRPDSTEVKLRL
YKFYRPENTHKGVKASYHTDINQLYWSDEEVTVSMSEVLGRCQVEYAEDLIESVQDYSSG
GPDRFYFLEAYNAKSKSYEDPPNHARSAVNKGKGKGKGKGKGKGKAAQESQDSNLEPQEP
KVPKYRTLDVFSGCGGLSEGFHQAGVSETEWAIEMWEPAAQAFRLNNPGTTVFTEDCNVL
LKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSYLSY
CDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAI
ILAVAPGEKLPRYPEPLHVFAPRACSLNVVVDEKKYVSNVTRGNGGIYRTITVRDTMSDL
PEIRNGANGLEISYNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIPLAPGS
DWRDLPNLEVRLRDGTMTKKLRYSHHDKKNGRSSTGALRGVCTCSGGKPCDAADRQFNTL
IPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECAR
SQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGMEIKKCVLETMKEKQATENIKQEKME
VSD
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaggacgtctctgtgtctgccagacgatgtcaagaaaaggctgcagatgctg
gaggaggatggctcttcagaggaggatcaagtgaaagagaagctcaagttggtgcaggac
ttcctgcatgatgatgctcaggatcaactgtccagcctcgagaaaaaaatgaaaagttca
gagatctcagtggaggtctacatctcaaaagtgaagaccttgttgggtaaagaacttcat
ctcgaaaatggttcacatctcgatgacgtggaacagaatggaaaagcgaatggcttcagt
aatggctcccataaagacgagcaggatgatgtagccatgggcacacaggaagatgaagat
gcttctgttaagtcgccaactgcttccaaagggaagggtgggcgaagaagcaaggggaac
actgagactaaaaaatctccagccagcactagagttacaagaaacagtgggaaacagcca
accatcttgtcaatgttctctaaagttcaaaaacgcaagtctgacgagttgactgaagaa
gctgccaatggaaaagatgaggtgaagaaagaagaagaggaggtcgaagagtctcgggag
gagaagcgtctcaaagtggaatcggatgctaaaactgttccggaggaggacaagagtgag
gccgttaaaccagtcgctgctgcaaagacggcaccccccaaatgtacagcttgcagacag
tacttggatgactcagacctgaagttctttcaaggggatccagataacgctcttgatgaa
ccagaaatgttaacagatgagcgtctctcactgtttgactcaaatgaagatggatttgag
agctacgatgatctgccgcagcacaagatcacacatttcagcgtgtatgataaacatggt
catctctgtcctttcgactctggactgattgagaagaatgtggagctttatttcagctgt
gttgttaaacccatctatgatgacaatccttcctttgatggtggggttcctgccaaaaag
cttggaccaatcaatgcctggtggatcactggctttgatggaggcgaaaaagctctcatt
ggtttcactacagcttttgcagattacatcctgatgcaccccagtgaggaatatgctcct
atttttgcactgatgcaggagaaaatctatatgagcaagatagtggttgaattccttcag
aaaaatcctgatgtttcatatgaggaccttctcaataaaattgagacaactgttcctcct
gcaggactaaactttaactgcttcaccgaagacacgctgctgcgccatgcccagtttgta
gtagagcaggtggaaagctatgatgaggctggcgactcagatgagaatcccatcattgtt
actccctgcatgagggacctaatcaaacttgcaggagtcacgctgggaaaaaggagagct
gccagacgacaggctatccgccacccaacaaagatagagaaggacagtaagggaccaact
aaagcaactacaaccaagctggtctatcagatcttcgataccttcttctccgaccagatt
gagcaggatgataaggatggtggaatcaaaagacagcgctgtggtgtctgtgaggtttgc
caatctgctgactgtggcaagtgtacagcttgcaaagacatgatcaaatttggtggaagt
ggcaaaagcaagcaagcttgcaaacaaagaagatgcccaaaccttgctgtgaaagaggcc
gaagatgatgaaaatgttgtggaagatgttccagaggagaaaaccaaaaaaattgctcct
accaaaagaaagaagcagaacaagtgcaaactttcctggattggagagcctgttcagtct
gaggggaagaagcatttctaccagaaagtctctgtgaatgaagaagtggtggaagtgggt
gactgtgtctcggtttcatcagaggatccatctattcctctgtatctggcaaggatcact
gctctgtgggaggacaacaatggaaagatgttccatgcccactggttccttcgtgggact
cacacagttcttggagagtcctcggatccactggagctcgtcatagtggatgaatgtgag
gacatgctgctcaattacgttgatggaaaagtgaacgttatgtacaaggctccttctgac
aactggttcatggagggtggagtggatgacgacctcaaagtgattgaggacgatggtaaa
agttttttctatcagttctgttatgatacagactatgcccgatttgagactcctcctaag
acttctacaccagaagaacagaagcacaggttctgtgccagctgttgtcgcactaaagag
agagagaagcgggaagcacctcacgcatttgaacccctggaaaatcaggacaatgacagc
aaagctctttatgctttggcctgctttaagggacaacagttcagggtaggaaacagtgtc
tacctgccccctgaagcgtttcattttacagtgaagccagcaagtccagtgaagcgctct
cacaggaaagaggatgtggatgaagatctgtatccggagtattacaggaagtcctcagac
tacattaagggatccaaccttaacgctccagaacctttccgtgtcggacgcatcaaggag
atcttctgccaccgacgtagtaacgggagacctgactctaccgaggtcaaactgcgactc
tacaagttctacaggcctgaaaacacccacaaaggtgtcaaagccagttaccacacagac
ataaaccagctgtactggagcgatgaagaagtgaccgtcagcatgtctgaggttctcggt
cgctgtcaagtagaatatgctgaagacctgattgaatccgtccaggactactccagtggc
ggaccagaccgcttctacttccttgaggcttacaatgcaaaatcaaaaagctatgaagat
cctcctaatcacgctcgctctgctgttaataaaggcaaaggaaagggtaaaggaaaaggt
aaaggcaaaggaaaggctgcacaggaatcgcaggactcaaaccttgaaccccaggagccc
aaagtgcctaaatatcgcacacttgatgtgttctctggctgcggtggactttctgagggc
ttccaccaggctggtgtctctgagactgaatgggctatagagatgtgggagcctgcagcg
caggccttcagactcaacaacccaggcaccactgtgttcacagaggactgcaatgtctta
ctgaagctggtcatgtctggagagaagacgaattctcttggccagaagctgcctcagaaa
ggagacgttgagatgttgtgcggaggacctccatgtcaaggtttcagtgggatgaaccgc
ttcaactcccgcacctattccaaattcaaaaactcccttgtggtctcctatctcagttat
tgtgattactacagacccaagtttttcctgcttgagaatgtgaggaactttgtgtcattc
aaaaactccatggtcctgaagctgactttgcgctgtctcgtgcgaatgggttaccagtgt
acctttggtgtccttcaggccggtcagtatggtgtcgcccagacccgccgtagggcaatc
atcctggctgttgctccgggagagaagctgccccgctaccctgaacctctgcacgtgttt
gcccccagagcttgctcactgaacgtggttgtggatgaaaagaaatacgtcagtaatgtt
acacgaggcaatggtggaatctacagaaccatcacggttagagacaccatgtctgatctg
ccagagattcgcaatggtgcaaatggactggagatttcctacaatggggagcctcagtcc
tggttccagaggcagatccgaggcacacagtatcagcccatcctcagagaccacatctgc
aaggacatgagtgctctggttgagggtcgcatgcgccacatccccttggctccgggctct
gactggagagatctgcccaacctggaggttcgcctgagagatggcaccatgactaagaaa
ctgcgctactcgcaccacgataaaaagaacggccgcagcagcactggtgccctcaggggc
gtctgcacctgctctggaggaaagccttgtgacgcagcggacagacagtttaacaccctg
atcccctggtgtctgccccacaccggaaaccgccacaatcactgggctggactgtatggc
agactggagtgggatggctttttcagcacaactgtcactaatcctgaacctatgggcaaa
cagggccgagttctgcatcctgagcagcacagagtggtcagtgtgagggaatgtgcacgc
tcacagggattccccgacacctaccgcttctttgggaacatcctggacaaacacagacag
gttggaaatgccgttcctcctccactctccagagcgatcgggatggagattaaaaagtgc
gtcttggagacaatgaaggaaaaacaggcaacagagaacatcaaacaagagaagatggaa
gtttctgattaa
DBGET
integrated database retrieval system
