Cololabis saira (Pacific saury): 133421487
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Entry
133421487 CDS
T09849
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133421487 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133421487 (gtf2f1)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
133421487 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
133421487
NCBI-ProteinID:
XP_061567098
LinkDB
All DBs
Position
21:22787873..22964302
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AA seq
532 aa
AA seq
DB search
MTSLGSSSSSTTEYTVRVPKNTNKKYSIMAFNAGDRVNCSGWTQARMERDMSARRIYGGE
EETTDGGAGSEFGKKQREEARRKKYGIVTREFKAEDQPWLLKVNGKAGKRFKGVKKGGVT
ENASYYIFTQCPDGAFEAFPVNGWYNFTPLAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQ
RRLREGERGVDDDDDETEKSGKKKKKGGGKGGDLRIHDLEEDMAMSSDSDSSMGDDGESK
PKKKDTGKGKGKKKKRKSNEHEALEDSDDGDYEGLEVDYMSDESSSDEETVKEKPNKGEE
LPKGVDEASESEEESEEENQNEEEAKEEEEEEEGKKTPVQTEKKKKKDSSGESESSDDSD
IEGETASALFMKKRTPPKRGGGRGSAGSSRTGSRPGTPSIDPASTSSTLRAAASKLEQGK
RPPQGPSTDTPAAKRLKMEPSTQSPGASGKSTPQPTSGKSTPSSSDVQLTEEAVRRYLIR
KPMTTKDLLKKFQTKRTGLSSETTVNVLAQILKRLNPERKNINDKMHFYLTE
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgacatccctggggagcagtagttcctccaccacagaatacactgtgcgcgtccccaaa
aacactaacaagaagtacagtataatggcattcaatgcaggggacagagttaattgctca
ggctggacacaggcccgtatggaaagagacatgagtgctcggcggatatatgggggggag
gaggagacaacggacggaggagcaggtagtgagtttggtaaaaaacagcgtgaggaagct
cgacggaagaagtatggtatcgtgacccgagagttcaaagcggaagaccaaccctggctc
cttaaagtcaatggcaaagctggcaagaggtttaaaggtgtaaagaagggcggcgttaca
gaaaatgcgtcctactacatttttacacagtgtcctgacggagcttttgaggcctttcct
gttaatgggtggtacaattttacaccactggcaaagcacagaactttgactgctgaagaa
gctgaggaagagtggggcagacggaacaaggtggtgaaccatttcagcatcatgcttcag
agacgtcttcgggagggggagcgcggcgttgatgatgatgatgatgagactgaaaagtct
gggaagaagaaaaagaaagggggtgggaagggaggagacctgcgcattcacgatttggaa
gaggacatggcgatgagcagtgacagtgacagcagcatgggggacgatggcgaaagcaaa
ccaaagaagaaggacacggggaaagggaaagggaagaaaaagaagcgaaagagcaatgaa
cacgaggctttggaagacagtgatgacggagactacgagggtctagaagtggattatatg
tcagatgaaagcagctcagatgaagagacagtaaaagaaaagccaaacaaaggagaggag
ctccctaaaggggttgatgaggcatctgagagtgaggaagagagtgaggaggagaatcaa
aatgaagaggaagcaaaagaggaagaagaggaggaagaagggaagaagactccagttcaa
acggaaaagaagaagaaaaaagacagcagtggcgaatcggagagctcagacgacagtgac
atcgagggagagacggcctccgccttgttcatgaaaaagcgcacacctcctaaacgtgga
ggtggccgtggctcggccggcagctccaggacgggcagccgccctggaaccccgtccata
gaccccgcatccacgtccagcacgctgcgtgctgctgccagcaagcttgagcaagggaag
agaccacctcagggtccgagtactgacacacctgcggccaaaagacttaaaatggagccc
agcactcagagcccgggtgcttctgggaagagcacacctcaacccacatcaggcaaatcc
actcctagctcaagtgatgtgcagctaaccgaggaggcggtacggaggtacctgatccgt
aaaccgatgaccaccaaagatttgctgaagaaattccagaccaagcgcacaggtttgagc
agcgagacgaccgtcaacgtgctggcacagattctgaagcgcctcaacccggagcgaaag
aacatcaacgacaagatgcacttttacctcacggagtaa
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