Cololabis saira (Pacific saury): 133421489
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Entry
133421489 CDS
T09849
Symbol
ppfia3
Name
(RefSeq) liprin-alpha-3 isoform X1
KO
K26226
liprin-alpha
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133421489 (ppfia3)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133421489 (ppfia3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Astro_p19
Tc-38
Motif
Other DBs
NCBI-GeneID:
133421489
NCBI-ProteinID:
XP_061567101
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Position
21:complement(8059485..8125330)
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AA seq
1237 aa
AA seq
DB search
MMCEVMPTISEDGRAGGGGGSSSPAGGGGGMGGGMGSLGGYGSQDRRSGGSTGGGSDEGG
STGNLESLMVNMLTERERLLESLRETQDSLGTAHLRLRELGHEKESLSRQLSIALPQEFA
VLTKELNHCREQLLEREEEISELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSP
AGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERVATLEEELQTSSQEVVSLKEQIK
RRQQGLDNGKERLPNGPSSILDDGEVDRQREGEIERQRSELGQLKERLALMCRQVGEIEE
QLTSARRELTRSEEANQKLQRDLKEALCQREDMEERITTLERRYLSAQREATSLHDIKDK
LENELASKESLHRQSEEKNRQLQERLDDAKQKLQQTLQRAETLPEIEAQLAQRVAALNKA
EERHGNFEERLRQMEAQLEEKNQELQRARQRERMNDEHNKRLSDTVDKLLSESNERLQLH
LKERMAALEEKNALSEELSNMKKLQDDLLANKDQLIAELERLQLELDQLRARPGGSYSSR
SLPGSALELRYSHGGGSLPTGSTTHLDPFGNVSGSIVRRSHRARWSSAREDSSKYPDWES
GAPLGTGYDTGMDLGCSDDEDDGEHRFGSELLSPSGQTDVQTLAIMLQEQLEAINKEIKL
IQEEKENTELRAEEIESRVSVGLDGPPVPPSSLGRDSTGRGFIPSSITSSTLASPSPPSS
GTSTPRLPHSPARESDRQNSKDDDRSLALIDSTPPPTPRALRLDRMALTHPGAMLDDPRE
FRSLSADGSSSNSSQDSLHKSSKKKSIKSSIGRLFGKKEKGRMGQPGRDGSASLASTPSE
DMASADAMGMNKTGTLGPADKDRRSKKKHELLEEACRQGLPFASWDGPTVVSWLELWVGM
PAWYVAACRANVKSGAIMANLSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSPSAPAST
RSSTSNVWMTHAEMESLNAATKPPELKEFSWDQILAYGDMNHEWVGNDWLPSLGLPQYRS
YFMESLVDARMLDHLTKKELRGQLKMVDSFHRVSMHYGIMCLKRLNYDRKELERRREDSA
HQNKDVMVWSNERVMCWMQAIGLKEYADNLRESGVHGALLALDDTFDYTDLALLLQIPNQ
NTQARQLLEQEYNSLITMGTERRPDEDGNKTFSRSPSWRKMFREKDLRGVTSDSAETLPA
NFRASAISTPSVTLRKVQSDASSGARGESASVRTYSC
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatctcggaggatgggcgcgccggcggcgggggcggc
tcctcctccccggcgggcggcggaggagggatgggcggcgggatgggaagcctgggcggc
tacggcagccaggatcgccgcagcggtggcagcaccggcggcggcagcgacgaagggggc
agcacgggcaacctggagtcgctgatggtgaacatgctgacggagagggagcggctgctg
gagagcctgagggagacgcaggacagtctggggacggctcacctccgcctgagggagctg
ggccacgagaaggagtcgctgtcgaggcagctgtccatcgccctgccgcaggagtttgca
gtgctgaccaaagagctgaaccactgccgggagcagctgctggagcgggaggaggagata
tcggagctgaaggcggagaggaacaacacacgactacttctggaacacctggagtgcctg
gtgtcccggcacgagcgcagcctgaggatgacggtggtgaagaggcaggcccagtctccg
gccggcgtctccagcgaggtggaggtcttgaaggccctcaagtccctgtttgagcaccac
aaagctctggatgagaaggtgcgggaacggctacgcgtggccttggagcgcgtggcgacc
ctggaggaagagctgcagacttcctcccaagaggtcgtgtctttaaaggagcaaatcaag
cgacgccagcaaggactggacaacggcaaagagcgacttcccaacgggccttcctccatc
ctggacgacggcgaagtggatcgtcagagagagggcgagatcgagcggcagcggtcggag
ctggggcagctgaaggagcgactggccctcatgtgcagacaggtgggagagatcgaggag
cagctgacgtcggcgaggagggagctgacgcggtccgaggaggcaaaccagaaactccag
agagacctgaaggaggcgctctgtcagagagaagacatggaggagaggatcaccacgttg
gagcgcaggtacctcagcgcccagagggaggcaacgtctctccacgacataaaagataaa
ctggaaaacgagttggccagcaaggagtctctccacagacagagcgaagagaaaaaccgg
cagcttcaggagcgtctggacgatgccaaacagaagctgcagcagacgctgcagagggcc
gagacgctgcccgagatcgaagcgcagctcgcacagagagtcgcagcgctcaacaaggcg
gaggagcgtcacggtaactttgaggagcggctgcgacagatggaggcgcaactggaggag
aagaaccaggagctacagagagccaggcagagggagcggatgaacgacgaacacaacaag
cgtctctccgacacggtggacaagctgctgtccgagtccaacgagcggctgcagcttcac
ctgaaggagaggatggccgcgctggaggaaaagaacgccctctctgaagaactctccaac
atgaagaagctccaggacgatctgttggcaaataaggaccagctaatagcggagctggag
cggctgcagctggagctggaccagctgagagcgaggcccggaggatcttattccagccgg
tctctgccgggaagcgccctggagttgaggtattcccacgggggcgggtccctcccgacc
ggctccaccactcacctggatcccttcggcaacgtctctgggagcatagtccggcggagc
caccgggcccgctggagctccgcccgcgaggactccagtaagtacccagactgggagagc
ggggcgccgctggggaccgggtacgacaccggcatggacctgggctgctctgatgacgag
gatgacggggagcatcgtttcggctccgagcttctctcccccagcggacagacggacgtg
cagacgctggccatcatgctgcaggaacagctggaggccatcaacaaggagatcaagttg
atccaggaggagaaggagaacacggagctgcgggccgaggagatcgagagccgggtcagc
gtgggtctggacggcccccccgtccctccctcctccctggggagagacagcacagggcga
ggcttcatcccctcgtccatcacctcctccaccctggcctccccgtctccccccagctcc
gggacctccaccccccgcctgcctcactccccggcccgggagagcgatagacagaacagc
aaagatgacgaccgatccctggctctcattgactccacgcccccgccgaccccccgggcg
ctgcgtctggacaggatggccctcacgcacccgggggccatgctggacgacccccgggag
ttccgcagtctctccgcagacggcagcagctccaacagcagccaggactctctccacaag
tccagcaagaagaaaagcatcaagtcttccatcggccgcctctttgggaagaaggagaag
ggacggatgggccagccgggccgcgacggctccgcgtctctcgcatctacgccctcggag
gacatggcctctgcagacgccatggggatgaacaagacgggaacgctcggccctgcagat
aaagatcgacgcagcaagaagaagcatgagctgctggaggaagcctgtcgtcagggacta
ccgtttgcctcctgggacggaccgaccgtggtgtcctggttggagctgtgggtggggatg
ccggcctggtacgtggcggcctgccgcgccaacgtgaagagcggcgccatcatggccaac
ctgtcggacacggagatccagagggagatcggcatcagcaacccgctgcaccgcctcaag
ctgcgcctggccatccaggagatggtgtcgctcaccagcccgtcggcgccggccagcacg
cgctcctccaccagtaacgtgtggatgacccacgcggagatggagtccctgaacgcagcc
accaagcctccggagctgaaggagttcagctgggaccagatcctggcctacggcgatatg
aatcacgagtgggtgggcaacgactggctgcccagcctgggcctgccgcagtaccgcagc
tacttcatggagtccctggtggacgcccgcatgctggaccacctgaccaagaaggagctg
agaggacagctcaagatggtggacagtttccacagggtcagtatgcattacggcatcatg
tgtctcaagcggctgaactacgatcgcaaagagctggagaggaggagagaagacagcgcc
caccagaacaaagatgtgatggtctggtccaacgagcgcgtgatgtgctggatgcaggcc
atcggtctgaaggagtacgccgacaacctgcgcgagagcggcgtccacggggctctgctg
gcgctggacgacacgtttgactacaccgacctggccctgctgctgcagatccccaaccag
aacacgcaggccagacagctcctggagcaggagtacaactccctcatcaccatgggaacc
gagagacggcctgacgaggatggaaataagacgttcagccgctctccgtcctggaggaag
atgtttagggagaaagacctccggggcgtgacctccgactctgccgaaaccctgcccgct
aacttccgtgcctcagccatctccacgccctccgtcaccctgaggaaggttcagagcgac
gccagctctggtgcccggggtgaatctgcctccgtgaggacgtactcctgttga
DBGET
integrated database retrieval system
