Cololabis saira (Pacific saury): 133421522
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Entry
133421522 CDS
T09849
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133421522 (irx5a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133421522 (irx5a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Caps_assemb_Wzi
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
133421522
NCBI-ProteinID:
XP_061567163
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Position
2:42739340..42743484
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AA seq
450 aa
AA seq
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MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSADAAAAATFTSYVGSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNATR
DATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEEEDENIDLEKNDDDEPSKPLLDKGDSTDTEADHKLLNPGDNMDRFKEETHGKSD
SDPLLSDSELKEQEERTAELLRPDSAKPTTSSPPRGSSSHDKPADLSQHAASTVTSNVTS
VIHSPPSAPKPKLWSLAEIATSSDRCKGGGGSSPGLQAQSAVTGSISASPPRSSPHQCAL
PSSTVLSRPLYYTSPFYPGYTNYGGAFGHLHSSNHGSVTTGSTAHFNGLNQTVLNRAEAL
VRESQKVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcagggctacttgtaccagccctccgcttccctggccctgtactcctgc
cctgcctacagcaccagcgttatatcgggacccagaaccgaggaacttgggagatcctcc
tcgggatcggcgtttgcgccctatgccggatctaccgcgttcaccagcgcctcgccgggc
tacaactcccacttaccttacagtgcagacgcggcggcagctgccacattcacctcatac
gtgggctccccctacgaccacacgagcggcatggccggctccatagggtaccacccgtac
gcggccccgctgggctcctacccctacggggaccccgcgtaccgcaagaacgccacccgg
gacgccaccgccaccctgaaggcctggctcaacgagcaccgcaagaacccgtacccgacc
aagggcgagaagatcatgctggccatcatcaccaagatgacgctcacgcaggtgtccacc
tggttcgccaacgccaggaggcggctaaagaaggagaacaagatgacctggacccctcgg
aaccgcagcgaggacgaggaggaggacgagaacatcgacctggagaagaacgacgacgac
gaacccagcaagccgttattggataagggagactcgacagacacagaagcagatcacaaa
ctactgaacccaggggacaacatggacaggtttaaggaagagacccacggcaagtcggac
tcggatcctctccttagcgactcggagttaaaggagcaggaggagcggactgcggagctg
ctgcggccggactccgccaagccgaccacgtcgtcgcccccccgggggagcagcagccac
gacaagccggcagacctgagccagcacgcggccagcacggtgaccagcaacgtgacctcg
gtgatccactccccgccctcggcccccaaacccaaactgtggtccctggcggagatcgcc
acgtcgtcagacaggtgtaaaggcggcggcggcagcagccccggcctgcaggcgcagagc
gcggtcacgggctccatcagcgcgtccccgccacggtcgtccccgcaccagtgcgcgctc
cccagcagcacggtgctgtccaggccgctgtactacacctcccctttctaccccggctac
acgaactatggcggcgcttttggacaccttcacagtagtaaccacggctcggtgaccacg
ggctccacggcacatttcaatggattaaaccagactgtgttaaatagagcagaggctttg
gtcagggagagccagaaagtgagaggccaaacgcaggtagatctttgtaaagactcccct
tatgaactaaagaaaggtatgtcaaatatttaa
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