Cololabis saira (Pacific saury): 133421532
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Entry
133421532 CDS
T09849
Symbol
irx6a
Name
(RefSeq) Iroquois homeobox protein 6a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133421532 (irx6a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133421532 (irx6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133421532
NCBI-ProteinID:
XP_061567175
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Position
2:42924377..42929996
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AA seq
503 aa
AA seq
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MVTKEAAMSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTGSSQTAAASFCCPPY
ENRLLERSRTELNAALGMYGSPYAAAAAASHNYNYFPYGTDPSALYSTLNPQYDIKDSTS
TLHSGITQTAAYYPYDHSLGQYQYDRYGTVDFNGTARRKNATRETTSTLKTWLYEHRKNP
YPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKTGDDKKDDLNKSDQD
CVTKDSSDCKEEKDLHLSDLEDMDEDDCDKLESDCEKTAADEQDFQRAMAVSAAPPKKDC
SSELHLSLTNSFHSFPCAIKSVAALPPLPSDFLDPVVPKPASGPSAGTVSLSHFEASEKP
RIWSLARTAASGVILSPQQLGPELRTGNSTGDCQLQSVRLAGVPTGQCGAMRGLHETGSI
NNAESTFPEGSSLHSKVYGTSSYGHKGLQLHCSSYSALPETCQYSTIEGFSGGKAEIQSS
DLSEACGTLQDDKVTAFRPVMKR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaaaagaagcagcaatgtctttctcgcaatttggatacccttacaatgcaact
tcacagtttttcgtgtcggcaaaccccagtacgacttgctgcgattcgatttccaggtcg
gtctctgacgggacaggcagctcccagaccgccgccgcctccttctgctgcccgccctac
gagaaccggctgctggagcgcagccgcacggagctgaacgcggcgctggggatgtacggc
tccccctacgccgccgcggcggcagccagccacaactacaactacttcccctacggaaca
gacccgtccgcgctctactccactctgaatccacaatatgacatcaaggacagcacaagc
actttacactctggcatcactcagactgctgcttactatccctacgatcactccctggga
cagtaccaatatgacagatatgggacggtagactttaacggcacagccagaagaaagaac
gccacacgtgaaaccaccagcaccctgaaaacgtggctctatgagcaccgcaagaacccc
taccccaccaagggagagaagatcatgctggccattattactaagatgacgctcacccag
gtgtccacctggttcgccaacgccaggagacggctaaagaaggagaacaagatgacctgg
tcgccaaagaataagaccggtgacgacaagaaggatgacctcaacaagagtgaccaagac
tgcgtcaccaaagattccagcgactgcaaggaagagaaggatctgcatctaagtgacttg
gaggacatggatgaggacgactgtgacaagctagagagtgactgtgaaaagacagcagcg
gacgagcaggacttccagagggccatggccgtatctgcagctccccccaaaaaagactgc
agctccgagctgcacctgagtttgaccaacagcttccactcgttcccctgcgccatcaag
agtgtcgccgccctcccccctctcccgtctgatttcctggatcctgtagtccccaaaccc
gcctctggcccatcggcaggaaccgtgtccctgtcccactttgaggcgtcggagaagccg
cggatttggtccctggctcgcacggcagcttccggggtcatcctgagccctcagcagctc
ggccccgagctgaggacggggaactccactggggattgccagctacaaagcgtcagactt
gcgggggttcctactggacagtgcggggccatgagaggcctccatgaaaccggcagcatc
aacaatgctgagagcacattcccagagggctcatccttgcactccaaagtttatggcact
agcagctacggccacaagggcctccaacttcactgttcttcctattctgcacttccagag
acatgtcagtactccactattgaaggattctctggcggcaaagcagagatccagtcgtct
gacctcagcgaagcctgtgggaccctgcaggatgacaaggtcactgcattcaggccagtc
atgaagaggtga
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