Cololabis saira (Pacific saury): 133421626
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Entry
133421626 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133421626
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133421626
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
LRR_6
PRY
LRR_4
SPRY
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133421626
NCBI-ProteinID:
XP_061567276
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All DBs
Position
21:complement(1044250..1063937)
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AA seq
1166 aa
AA seq
DB search
MDQCEDREEGVLPSKTSPRGKPEREEERRPGPGPGPSCVSLKSDGSKGLPIYFKESAGFP
SERKQPGPESGSEPGPGPSCVSLKSDGSKGLPIYFKESPGFPSDEVDQEISESPSGPSVQ
QHQTQLDSVFQLLEDDIVMFVKDELKKIQKVLSPDYPESSESLEEDEDEEQKSIRETFMK
ITVKFLRRRKQEKLADLLQSKTVAAVCQSKLKVQLQKKHQHVFEGIIKAGNKILLEQIYT
ELYITEGGTGEVNNEHEVRQIEAASRKPDGAETSIRQEDIFKPPPGRGGPIRTVMTKGVA
GIGKTVLTQKFSLDWAEGRTNQDIQFLLPFTFRQLNVLKDRKFSLVELVHGFFSETKGIC
SFEEFQVAFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTNLIRGNLLPSARLWITT
RPAAANQIPPYCVDMVTEVRGFTDPQKEEYFRKRFREEEKTSRIISHIKTSRSLHIMCHI
PVFCWITATVLENVLETREGGELPKTLTEMFIHFLVVQAKLKKAKYDGGAETDPHWSPES
RKMVESLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQIFREESSLYQDQVF
CFIHLSVQEFLAALYVRLSFIKSRVNMLEDQPTTHHSSNSFYQSAVDKALQSPNGHLDLF
LRFLLGLSLETNQNLLRGLKTSTQRSSQDNQETVKYIKKKISEDLSAERSINLFHCLNEL
NNQSLVEEVQRSLTSGRLSTDELSPAQWSALAFILLSSGDLEVFDLKKFSASEEALRRLL
PVVKASKKVLLSGCNLSEDICPLLSSVLSSQSSSLTELDLSNNDLQDSGLKQLCPGLESP
HCKLESLRLSGCLISEEGSAFLVSALTSNPSHLRELDLSNNDLQDSGLEQLCPGLESPHC
HLESLRLSGCLISEEGSSSLVSALTSNPSHLRELDLSYNHPGESAGKLLSGLEDPRWRLD
ILRVEPAGQRWLTPGLRKYSCQLTVDTNTVHNYIKLSDNNRKMTCVKEDQSYPDHPDRFD
DDDLPQLLCREVLTGRCYWEVQWSEHVSVSVSYRRISRKGNSGDCWFGGNDHSWSLDCYP
GGRYQVWHNNRETSVTSSSSSSYSGIAAVYVDVPAGTLSFYEVSVSDRLIHLHTFNTSFT
EPLCAGFGLRSWSWCGSESSVSLGPL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccttccctccaaaacctccccgagggga
aaacctgagagagaagaagagaggagacctggacctggacctggtcccagttgtgtgtcc
ttaaagagtgacggatcaaagggtttacctatctattttaaagagtctgctggttttcct
tcagagaggaaacaacctggacctgaatctggatctgaacctggacctggacccagctgt
gtgtccttgaagagtgacggatcaaagggtttacctatctattttaaagagtctcctggt
tttccttcagacgaagtggaccaggagatctcagagtcccccagcggtccgtctgtccag
cagcaccagacccagctggactccgtctttcagctgctggaggacgacatcgtcatgttt
gtgaaggacgagctgaagaagatccagaaggttctgagtccagattacccagaatcctca
gagagtctggaggaggatgaagatgaggagcagaagagcatcagagagacattcatgaag
atcacagtgaagttcttgaggaggaggaagcaggagaagctggccgacctcctgcagagc
aagacagtcgctgccgtttgtcaatccaaactcaaagttcagctgcagaagaagcaccag
catgtgtttgagggaatcattaaagcaggaaataaaatccttctggagcagatctacaca
gagctctacatcacagagggagggaccggagaggtcaacaatgaacatgaagtcagacag
attgaagcagcttccaggaaaccagacggagcagaaacatccatcagacaggaagacatc
tttaaacccccacctggaagaggaggaccaatcagaacggtgatgacgaagggagtggcc
ggcatcgggaaaacagtcctaacacagaagttcagtctggactgggctgaaggcagaacc
aaccaggacatccagttcctgcttccattcaccttcagacagctgaatgtgctgaaagac
agaaagttcagcttggtggaactagttcatggattcttctctgaaaccaaaggaatctgc
agctttgaagagttccaggtcgcgttcatctttgacggtctggatgagagtcgacttcct
ctggacttccacaacaatgaggtcctgaccgatgttacagagtccacctcagtggacgtg
ctgctgacaaacctcatcagggggaacctgcttccttctgctcgtctctggatcaccaca
cgacccgcagcagccaatcagatccctccttactgtgttgacatggtgacggaggtcaga
gggttcactgacccacagaaggaggaatacttcaggaagaggttcagagaagaggagaag
accagcaggatcatctcccacatcaagacatcacggagcctccacatcatgtgccacatc
ccagtcttctgctggatcactgctacggtcctggagaacgtcctggaaaccagagaggga
ggggagctgcccaagaccctgactgagatgttcatccacttcctggtggtccaggccaaa
ctgaagaaggccaagtatgacggaggagctgagacggatccacactggagtccagagagc
aggaagatggtggagtctctgggaaaactggcttttgagcagctgcagaaaggaaacctg
atcttctatgaaccagacctgagagagtgtggcatcgatgtcagagaggcttcagtttac
tcaggagtgttcacccagatctttagagaggagagcagcctgtaccaggaccaggtcttc
tgcttcatccatctgagtgtccaggagtttctggctgctctgtatgtccgtctgtccttc
atcaagtctcgagtcaacatgctggaagatcaaccaacaactcaccattcttcaaacagt
ttctatcagagtgctgtggacaaggccttacagagtcccaacggacacctggacttgttc
ctccgcttcctcctgggtctttcactggagaccaatcagaacctcctacgaggtctgaag
acatcaacccaaagaagttcacaggacaatcaggaaacagttaaatacatcaagaagaag
atcagtgaggatctgtctgcagagagaagcatcaacctgttccactgtctgaatgaactg
aacaatcagtctctggtggaggaggtccaacggtccctgacgtcaggacgactctccaca
gatgaactgtctcctgctcagtggtcggctctggccttcatcttactgtcatcaggagat
ctggaggtgtttgacctgaagaagttctcagcttcagaggaggctctacggaggctgctg
ccggtggtcaaagcctccaagaaagttctactgagtggctgtaacctctcagaggacatc
tgtccacttctgtcctcagttctcagctctcagtcctccagtctgacagaactggacctg
agcaacaacgacctgcaggattctggactgaagcagctgtgtcctggactggagagtcca
cactgcaaactggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagtgct
tttctggtctcagctctgacctccaacccctcccacctgagagagctggacctgagcaac
aacgacctgcaggattctggactggagcagctgtgtcctggactggagagtccacactgt
cacctggagtctctcaggctgtcaggctgtctgatctcagaggaaggaagttcttctctg
gtctcagctctgacctccaacccctcccacctgagagagctggacctgagctacaaccat
ccaggggagtcagcagggaaacttctgtctggactggaggatccccgctggagactggac
attctcagggtggagcctgctggacaacgatggctgacaccaggtctgaggaagtattcc
tgtcaactcaccgtcgacacaaacacagtccacaactacatcaaactgtctgacaacaac
aggaagatgacgtgtgtgaaggaggatcagtcatatcctgatcatccagacaggtttgat
gatgatgatcttcctcagctgctgtgtagagaagttctgacgggtcgctgttactgggag
gtccagtggagtgaacatgtttctgtatcagtgagttacagaagaatcagcaggaaagga
aactctggtgactgttggtttggaggaaacgatcattcctggagtctggactgttatcca
ggcggtcggtaccaagtctggcacaataacagagaaacatccgtcacctcctcatcttca
tcttcatactctggcatagcagcagtttacgtggacgttcctgctggaactctgtccttc
tatgaagtctctgtctctgacagactgatccacctccacaccttcaacaccagcttcact
gaacctctctgtgctggatttggactcaggtcctggtcctggtgtggttctgagtcctca
gtgtctctgggtccactttag
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