Cololabis saira (Pacific saury): 133421802
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Entry
133421802 CDS
T09849
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04136
Autophagy - other
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133421802 (wipi1)
04136 Autophagy - other
133421802 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133421802 (wipi1)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133421802 (wipi1)
Membrane trafficking [BR:
csai04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
133421802 (wipi1)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
133421802 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
DUF5711
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
EIF3I
RMC1_N
Lgl_C
Motif
Other DBs
NCBI-GeneID:
133421802
NCBI-ProteinID:
XP_061567554
LinkDB
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Position
21:complement(34638382..34665059)
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AA seq
461 aa
AA seq
DB search
MEPAEGAEEPGPGPPGSPGPELRLGCVSFNQDSTSLALGTRTGYKLFSLTTVEKLDCIHE
SAEVPDVYIVERLFSSSLVVVVSAATPQRMNIYHFKKGTEICNYSYTSNILAVRLNRQRL
VVCLEESIYIHNIKDMKLIKTLLNTPSNPSGLCTLSINHSNSYLAYPGSATIGEIVVYDA
NNLSTVTVIPAHDTPLAALAFNASATKLASASERGTVIRVFSVPEGLRLFEFRRGMKRYV
SISSLSFSPDGQFLCVSSNTETVHVFKLELLGPSGEDEAATWTAYMGKMLSAASSYLPAQ
VSGMMSQDRAFATVHLLSYGQRSVSTLVTIQKLPRLLVATANGQLFIYNVDPQEGGECEL
AYKHRLFGADESDEVGSVPVGSQVTETAITLPSYAETAALPASGPVTATLTGYSEDGGAK
KGEVIPEHEFATGPVCLDDENEFPPINACRDGTGGGRERHS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgcggagggcgcggaggagccggggccggggcccccggggtccccggggccg
gagctccggctcggctgcgtctccttcaaccaagactccacgtctctggctttgggaaca
aggaccggctacaaactgttttctctgacaacggtggaaaaactggactgcatccacgag
agtgcagaggttccagatgtttacatcgtggagcgtctcttctccagcagtctggttgtg
gtggtgagcgccgccacgccgcagcgcatgaacatctaccacttcaagaaagggacggag
atttgcaactacagctacaccagcaacatcctcgccgtgaggctcaacagacagaggctg
gtggtgtgtctggaagagtccatttacatccacaacatcaaagacatgaaactgatcaag
actctgctcaacacgccgtccaacccctcaggtctctgcactctctccatcaaccattcc
aactcgtacctggcgtaccccggcagcgccaccatcggcgagatcgtggtgtacgatgcc
aacaatctgagcacggtgacggtgatcccggcccacgacactcctctggcagctctggcc
ttcaacgcctcggccaccaaactggctagcgcctccgagaggggcaccgtcatccgagtc
ttctctgttcctgaaggcctgcgcctgttcgagtttcgcagaggcatgaagaggtatgtc
agtataagctcattatccttcagccccgacggccagttcctctgtgtgtccagcaacacg
gagacggtccatgtcttcaaactggaactactgggaccaagtggggaggacgaggctgcc
acctggacggcctacatggggaagatgctgtcggcggccagcagctacctccctgctcag
gtgtcgggcatgatgagccaggaccgggctttcgccaccgttcacctcctctcatacggc
cagaggagcgtctccactttagtcacgatccagaaacttccacggctgctggtggcgact
gccaacgggcagctcttcatctataatgtggatccccaggaggggggcgagtgcgagttg
gcgtacaaacacaggctgtttggagctgatgaaagtgacgaggttggatcagtaccagtg
ggctcacaggtcaccgagacagccataactctgccatcttatgctgaaactgctgcttta
cccgcctccggtccggtcactgccactctcactggctactctgaagacggcggagctaaa
aaaggcgaagtcatacctgagcacgagttcgccactgggcccgtgtgtctggacgacgag
aacgagtttcctcctattaatgcgtgccgtgacgggactggaggtggccgggagaggcac
tcctga
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