Cololabis saira (Pacific saury): 133422079
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Entry
133422079 CDS
T09849
Symbol
alyref
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
csai03015
mRNA surveillance pathway
csai03040
Spliceosome
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133422079 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
133422079 (alyref)
03015 mRNA surveillance pathway
133422079 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133422079 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133422079 (alyref)
03041 Spliceosome [BR:
csai03041
]
133422079 (alyref)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133422079 (alyref)
TREX complex
133422079 (alyref)
Spliceosome [BR:
csai03041
]
Complex C
Other components
EJC/TREX
133422079 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133422079 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
133422079
NCBI-ProteinID:
XP_061567966
LinkDB
All DBs
Position
21:24762027..24764992
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AA seq
271 aa
AA seq
DB search
MADKMDMSLDDIIKQNRQTRGGGRGGRGRGRGGALGGRGGGPGRLGGGGGGGGGGFGGRG
GGSGPMRSRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGG
KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQY
NGIPLDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRGRGFGMQRGRGGRGAGGARGRG
RGGRGATNKQPLSAEELDAQLDAYNARMDTS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagatggatatgtctctagacgacattatcaagcagaacaggcagactaga
ggcggaggccggggcgggagaggccgcggccgcggaggcgcgctgggcggccgcggggga
ggaccaggacggctcggtggcggcggcggcggcggcggcgggggatttggaggccgaggc
ggcggatccggccccatgaggagccggcagaacctgagccgcgctagaggcaggccgacg
ccgtacagcaggcctaaacagcttccggacaagtggcagcacgacatgttcgacaacggc
ttcagcggcttcaatggtgctgctgggggcggcggaggagccggcgtggagactggaggg
aagcttctcgtgtccaatctggactttggggtctcagacgcagacattcaggaacttttc
gcagagtttggaaccctaaagaaagctgctgttcattatgaccgatcaggaaggagcctg
ggaaccgctgatgttcactttgaaaggagagcagatgccctaaaggccatgaaacagtac
aatggcatcccactcgatgggcggcctatgaacatacaactcgtcacatcacagattgac
acacagagacggcctatgcagggtctgaacagaggtggcggaggcatgaacagaggtcgc
ggcttcggcatgcagaggggtcgaggaggacgtggtgcgggcggtgcccgaggacgagga
aggggtggtcgcggtgccactaacaagcaacccctatcagcagaggagcttgatgctcag
ttagacgcctacaacgccagaatggacaccagctaa
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