Cololabis saira (Pacific saury): 133422080
Help
Entry
133422080 CDS
T09849
Symbol
smarce1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133422080 (smarce1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133422080 (smarce1)
03036 Chromosome and associated proteins [BR:
csai03036
]
133422080 (smarce1)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133422080 (smarce1)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133422080 (smarce1)
PBAF complex
133422080 (smarce1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
HMG_WDHD1
Pcf11_helical
Motif
Other DBs
NCBI-GeneID:
133422080
NCBI-ProteinID:
XP_061567967
LinkDB
All DBs
Position
21:complement(37241830..37257776)
Genome browser
AA seq
488 aa
AA seq
DB search
MSKRPSYAPPPPPAPTTQMPSTPGFVGYNPYSHLAYNNLRLGGSSGGSSRNSTGITVPKP
PKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLNE
YEAEKIEYNDSLKAYHNSPAYLAYVNAKNRAEAAMEEESRQRQSRMDKGEPYMSIQPAED
PDDYDDGFSVKHTAAARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMVHQ
RKLEAELLQIEDRHQEKKRRFLETTDSFNSELKRLCSQKVEVDMEKLAAEMAAAEEAARR
RAEEREREVAEQAEKAAQQEASGNNGAEPSSANANANANASSPASNPSGTKEEDKPSPME
TDEAAPAEPPSDPQTAPPLPPDGSPSAGKASPPPEPPRETSTPSSSIAPSDDSNSMPPPP
EGTPGAPAGQESNSSAASPAVAAAAPTAPEESPPKPPLLPPSQSSQSSQSSQGSQGSQGS
QSSQQYDL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgcccgtcctacgcccctcctccaccccccgccccaacaacgcaaatgcct
tccaccccagggtttgtgggctacaacccttacagccatctggcctacaacaacctccgc
ctgggagggagctccggaggctccagcaggaactccacgggcatcaccgtcccgaagcct
cccaaacctccagacaagcccctgatgccgtacatgcggtacagccggaaggtaagcagg
aaggtgtgggaccaggtgaaagcttccaacccggacctgaagctgtgggagatcgggaag
atcatcggagggatgtggagggacctgacggacgaggagaagcaggactacctgaacgag
tacgaggctgagaagatcgagtacaacgactctctgaaggcctaccacaactccccggcg
tacctggcctacgtcaacgccaagaaccgggcggaggcagcgatggaggaggagagcagg
cagaggcagagccgtatggacaagggagaaccgtacatgagcattcagcctgctgaagac
cccgacgactatgacgatggtttctcggtgaagcatacagcagccgctcgcttccagagg
aaccaccgactcatcagcgacattctcagtgagatagttgtgcctgacgtgcgctctgtg
gtcaccacggcgcgcatgcaggtgctcaagaggcaggtccagagtctcatggtgcaccag
aggaaactggaagcagaacttctacaaattgaggaccgtcaccaagaaaagaaaagacgg
ttcctggagaccacggactcgttcaacagtgaactgaaacggctgtgcagtcagaaggtg
gaggtggacatggagaagctggcagcagaaatggccgccgccgaagaggcggcgcggcgg
cgggcggaggagagagagcgggaagtggccgagcaagctgagaaagctgcacaacaagag
gcttctggaaacaacggagccgagccgagcagcgctaacgccaacgctaacgccaacgcc
agcagcccggctagcaacccctcagggaccaaagaggaggacaagcccagtcccatggag
acagatgaagcagcccctgcagagcccccctcagaccctcagactgctccacctctccca
cccgacggatctccctctgctggtaaagccagccctccccccgagccccccagggagacc
agcacccccagcagcagcatcgcccccagcgacgacagcaacagcatgccccccccacca
gagggcaccccgggggccccggcgggccaggaatccaactccagcgccgccagccccgcg
gtggcagcagcagctcccactgccccggaggaatctccccctaaacccccgctgctcccc
cccagccagagcagccagagcagccagagcagccagggcagccagggcagccagggcagc
cagagcagccagcagtacgacctgtag
DBGET
integrated database retrieval system
